CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
vacuole 2
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	vacuole
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g08850.t01	Wine grape	plasma membrane	81.52	88.03
Solyc07g022790.2.1	Tomato	plasma membrane	34.17	86.36
CDY70305	Canola	plasma membrane	21.18	86.18
AT1G10130.1	Thale cress	plasma membrane	84.22	84.47
GSMUA_Achr6P23080_001	Banana	plasma membrane	82.32	83.65
CDX94924	Canola	plasma membrane	69.23	83.59
CDY22604	Canola	plasma membrane	83.12	83.37
KXG37640	Sorghum	plasma membrane	82.52	82.6
Os03t0730800-01	Rice	plasma membrane	52.75	82.5
HORVU4Hr1G010200.3	Barley	plasma membrane	82.32	82.4
TraesCS4D01G060900.1	Wheat	plasma membrane	82.32	82.4
TraesCS4B01G061900.1	Wheat	plasma membrane	82.22	82.3
TraesCS4A01G253500.1	Wheat	peroxisome	82.22	82.3
Zm00001d033886_P001	Maize	mitochondrion	79.42	82.3
Solyc07g022780.2.1	Tomato	mitochondrion	29.67	81.15
Bra031701.1-P	Field mustard	plasma membrane	81.92	75.58
CDY53835	Canola	nucleus, plasma membrane, plastid	23.08	75.0
Bra019960.1-P	Field mustard	plasma membrane	75.42	72.25
CDX93457	Canola	cytosol, nucleus, plasma membrane	73.53	61.08
KRG95874	Soybean	endoplasmic reticulum	47.65	45.0
KRH67591	Soybean	endoplasmic reticulum	47.65	45.0
KRH06423	Soybean	plasma membrane	46.55	44.09
KRH47857	Soybean	plasma membrane	46.65	43.52
KRH47020	Soybean	golgi, plasma membrane	21.68	29.44
KRH67272	Soybean	peroxisome, plasma membrane	25.87	28.28
KRH23922	Soybean	plasma membrane	23.28	27.35
KRH29171	Soybean	plasma membrane	25.47	26.81
KRH58090	Soybean	cytosol	26.87	26.53
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	26.87	26.53
KRH33214	Soybean	endoplasmic reticulum	27.17	26.28
KRH72028	Soybean	cytosol, nucleus, plasma membrane	26.87	25.99
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	26.27	25.94
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	26.27	25.89
KRG93759	Soybean	plastid	26.27	25.56
KRH41701	Soybean	mitochondrion	25.17	25.56
KRH61405	Soybean	endoplasmic reticulum	25.87	25.42
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	25.87	25.42
KRG95593	Soybean	plasma membrane	26.87	25.16
KRH44631	Soybean	nucleus	27.07	24.82
KRG95209	Soybean	plasma membrane	25.57	24.73
KRH66886	Soybean	plasma membrane	25.47	24.59
KRH39871	Soybean	plasma membrane, plastid	25.37	24.4
KRH23705	Soybean	nucleus, plastid	26.37	23.93
KRH37353	Soybean	plasma membrane	25.87	23.87
KRH09610	Soybean	plasma membrane	25.97	23.83
KRH12351	Soybean	cytosol, nucleus, peroxisome	25.67	23.75
KRH02761	Soybean	cytosol, nucleus, peroxisome	25.27	23.47
KRH19116	Soybean	cytosol	25.07	23.37
KRH14123	Soybean	plasma membrane	16.18	15.74
KRH47024	Soybean	cytosol, nucleus, plasma membrane	4.7	13.31

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100783509	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02002163	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G046700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0033017	GO:GO:0070588
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:K7KI34
EnsemblPlants:KRH61432	ProteinID:KRH61432	ProteinID:KRH61432.1	InterPro:P-type_ATPase_IIA	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
PANTHER:PTHR42861	PANTHER:PTHR42861:SF6	InterPro:P_typ_ATPase	InterPro:SERCA3	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01116	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI00023393B7	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:3723256..3748184

Molecular Weight (calculated)

109917.0 Da

IEP (calculated)

5.801

GRAVY (calculated)

0.245

Length

1001 amino acids

Sequence
(BLAST)

0001: MEDAFARSIP EVLDFFGVDP TKGLSDAEVV QHARLYGKNV LAEDQRVPFW KMVLKQFDDL LVKILIAAAL ISFILALING ETGLMAFLEP SVILMILAAN
0101: AAVGVITETN AEKALEELRA YQADVATVLR NGCFSILPAT ELVPGDIVEV SVGCKIPADM RMIEMLSNQV RVDQAILTGE SSSVEKELKT TTTTNAVYQD
0201: KTNILFSGTV MVAGRARAVV VGVGPNTAMG SIRDSMLRTE DEVTPLKKKL DEFGTFLAKV IAGICVLVWI VNIGHFRDPS HGGFLRGAIH YFKIAVALAV
0301: AAIPEGLPAV VTTCLALGTK RMAKLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVA KVCVVESAKR GPVVSEYSVS GTTYAPEGII FDSTGLQLDF
0401: PAQLPCLLHM AMCSALCNES TLQYNPDKGN YEKIGESTEV ALRVLAEKVG LPGFNSMPSS LNMLTKHERA SYCNHYWEEQ FRKIHVLEFS RDRKMMSVLC
0501: SRNQMHVLFS KGAPESIISR CTSILCNDDG SIVSLTADIR AELDSRFHSF AGKETLRCLA LALKWMPSTQ QSLSFDDEKD LTFIGLVGML DPPRDEVRNA
0601: MLSCMTAGIR VIVVTGDNKS TAESLCRKIG AFDQLIDFAE HSYTASEFEE LPALQQTIAL QRMALFTRVE PSHKRMLVEA LQHQNEVVAM TGDGVNDAPA
0701: LKKADIGIAM GSGTAVAKSA SDMVLADDNF ASIVAAVAEG RAIYNNTKQF IRYMISSNIG EVVCIFVAAV LGIPDTLAPV QLLWVNLVTD GLPATAIGFN
0801: KQDSDVMRAK PRKVNEAVVT GWLFFRYLVI GAYVGLATVA GFIWWFVYSD SGPKLPYTEL MNFDTCPTRE TTYPCSIFDD RHPSTVSMTV LVVVEMFNAL
0901: NNLSENQSLL VIPPWSNLWL VASIILTMLL HMLILYVHPL SVLFSVTPLS WTDWTVVLYL SLPVIVIDEV LKFFSRNPIG LRFRLWFRRS DLLPKKELRD
1001: K

Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)

001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK

Arabidopsis Description

ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.