CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 3
plastid 1
vacuole 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH24625
KRH26664
KRH29625

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37640.1	KRH24625	AT4G03290.1	21798944
AT4G37640.1	KRH29625	AT4G03290.1	21798944
AT4G37640.1	KRH22653	AT5G22290.1	21798944
AT4G37640.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58090	Soybean	cytosol	97.63	97.63
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	83.92	83.76
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	83.73	83.73
VIT_07s0129g00180.t01	Wine grape	plasma membrane	81.76	81.35
Bra017841.1-P	Field mustard	plasma membrane	81.16	81.16
CDX72644	Canola	plasma membrane	81.16	81.16
CDY29571	Canola	plasma membrane	81.07	81.07
PGSC0003DMT400055192	Potato	plasma membrane	81.26	81.02
AT4G37640.1	Thale cress	plasma membrane	80.57	80.57
Solyc02g092450.2.1	Tomato	nucleus, unclear	80.77	80.53
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	80.77	80.53
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	80.57	80.49
GSMUA_Achr4P10940_001	Banana	cytosol	70.81	80.4
CDY22420	Canola	plasma membrane	80.47	80.31
CDY44033	Canola	plasma membrane	80.67	80.27
Solyc02g064680.2.1	Tomato	nucleus, unclear	80.28	80.04
Bra039940.1-P	Field mustard	plasma membrane	79.78	79.78
CDY49443	Canola	plasma membrane	79.68	79.68
CDX76883	Canola	plasma membrane	79.59	79.59
GSMUA_Achr4P32520_001	Banana	plasma membrane	64.69	79.32
Bra010605.1-P	Field mustard	plasma membrane	80.57	79.32
VIT_07s0129g00110.t01	Wine grape	plasma membrane	41.62	78.88
GSMUA_Achr6P16920_001	Banana	cytosol	59.27	78.05
Os12t0586600-01	Rice	plasma membrane	77.91	77.45
KRH61405	Soybean	endoplasmic reticulum	77.12	76.74
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	77.12	76.74
Zm00001d030893_P004	Maize	plasma membrane	76.73	76.27
KXG23838	Sorghum	plasma membrane	76.43	75.98
TraesCS5D01G080700.1	Wheat	plasma membrane	76.23	75.78
TraesCS5A01G068700.1	Wheat	plasma membrane	76.13	75.69
TraesCS5B01G075100.2	Wheat	plasma membrane	76.04	75.59
HORVU5Hr1G018160.3	Barley	cytosol	75.35	73.96
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	68.44	66.1
EER93815	Sorghum	plastid	67.06	65.83
Os03t0616400-01	Rice	plastid	66.86	65.63
TraesCS4D01G079200.1	Wheat	plasma membrane	67.95	65.62
TraesCS4A01G234700.1	Wheat	plastid	67.65	65.21
TraesCS4B01G080300.1	Wheat	plastid	67.55	65.11
Zm00001d033334_P001	Maize	plastid	66.17	64.89
KRH23922	Soybean	plasma membrane	54.34	64.67
KRH33214	Soybean	endoplasmic reticulum	62.03	60.77
KRG95209	Soybean	plasma membrane	61.93	60.68
KRH39871	Soybean	plasma membrane, plastid	62.23	60.61
KRH72028	Soybean	cytosol, nucleus, plasma membrane	61.34	60.1
KRH66886	Soybean	plasma membrane	61.44	60.08
KRH47020	Soybean	golgi, plasma membrane	37.18	51.15
KRH67272	Soybean	peroxisome, plasma membrane	43.0	47.6
KRH44631	Soybean	nucleus	49.01	45.51
KRH09610	Soybean	plasma membrane	48.52	45.1
KRH12351	Soybean	cytosol, nucleus, peroxisome	48.03	45.01
KRH02761	Soybean	cytosol, nucleus, peroxisome	47.83	44.99
KRH37353	Soybean	plasma membrane	48.13	44.98
KRH19116	Soybean	cytosol	47.14	44.51
KRH23705	Soybean	nucleus, plastid	48.13	44.24
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	69.92	43.87
KRH29171	Soybean	plasma membrane	40.93	43.64
KRH41701	Soybean	mitochondrion	42.41	43.61
KRG93759	Soybean	plastid	43.79	43.15
KRG95593	Soybean	plasma membrane	44.87	42.56
KRH47024	Soybean	cytosol, nucleus, plasma membrane	11.54	33.14
KRH67591	Soybean	endoplasmic reticulum	28.9	27.64
KRG95874	Soybean	endoplasmic reticulum	28.9	27.64
KRH61432	Soybean	plasma membrane	26.53	26.87
KRH06423	Soybean	plasma membrane	27.61	26.49
KRH47857	Soybean	plasma membrane	27.71	26.19
KRH14123	Soybean	plasma membrane	24.95	24.59

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100815662	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02010415	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:Ca_ATPase_N_dom	EnsemblPlantsGene:GLYMA_17G161300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1MVM0
InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH04436	ProteinID:KRH04436	ProteinID:KRH04436.1	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF12515	PFAM:PF13246	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF262	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix
UniParc:UPI000233EDBA	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:14014179..14019490

Molecular Weight (calculated)

110650.0 Da

IEP (calculated)

5.875

GRAVY (calculated)

0.169

Length

1014 amino acids

Sequence
(BLAST)

0001: MESYLHENFG GVKSKNTTEE ALQKWRKVCG VVKNPKRRFR FTANISKRSE AAAMRRTNQE KLRVAVLVSK AAFQFIQGVQ PSDYVLPDEV KAAGFQICAE
0101: ELGSIVEGHD VKKLKFHGGV DGIAGKLSTS TTTGLSGDSE SRHRRQELFG VNKFTESEVR SFWIFVYEAL QDMTLMILGV CAFVSLIVGI ATEGWPKGAH
0201: DGLGIVASIL LVVFVTAMSD YRQSLQFKDL DKEKKKISIQ VTRNGYRQKM SIYSLLPGDL VHLSIGDQVP ADGLFVSGFS VLIDESSLTG ESEPVMVTSQ
0301: NPFLLSGTKV QDGSCTMLIT TVGMRTQWGK LMATLSEGGD DETPLQVKLN GVATIIGKIG LVFAVITFAV LVKGLMGRKL QEGRFWWWSA DDALEMLEFF
0401: AIAVTIVVVA VPEGLPLAVT LSLAFAMKKM MNDKALVRHL AACETMGSAT TICSDKTGTL TTNRMTVVKT CICMNIKEVT SNDSTLSSEL PDSTLKMLLQ
0501: SIFSNTGGEV VVNKKGKREI LGTPTESALL EFGLSLGGDF HAERQTCKVV KVEPFNSERK RMGVVLEIPG GGLRAHSKGA SEIILAACDK VINSNGDVVS
0601: IDEESSNYLN STIDQFAGEA LRTLCLAYLE LENGFSTEDP IPVSGYTCVG IVGIKDPVRP GVKESVEVCR SAGIVVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPDFR EKTQEELFEL IPKIQVMARS SPLDKHTLVK HLRTTFGEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALLVNFS SACMTGSAPL TAVQLLWVNM IMDTLGALAL ATEPPTDDLM KRMPVGRKGE FINNVMWRNI LGQALYQFVV
0901: IWFLQSVGKW VFFLRGPNAE VVLNTLIFNT FVFCQVFNEV NSREMEDTDV FKGIWDNHVF IGVLGATVFF QILIVEYLGT FANTTPLSLV QWIFCLGAGY
1001: VGLPLAVRLK QIPV

Best Arabidopsis Sequence Match ( AT4G37640.1 )
(BLAST)

0001: MESYLNENFD VKAKHSSEEV LEKWRNLCGV VKNPKRRFRF TANLSKRYEA AAMRRTNQEK LRIAVLVSKA AFQFISGVSP SDYTVPEDVK AAGFEICADE
0101: LGSIVESHDV KKLKFHGGVD GLAGKLKASP TDGLSTEAAQ LSQRQELFGI NKFAESEMRG FWVFVWEALQ DMTLMILGVC AFVSLIVGIA TEGWPKGSHD
0201: GLGIAASILL VVFVTATSDY RQSLQFRDLD KEKKKITVQV TRNGFRQKLS IYDLLPGDIV HLAIGDQVPA DGLFLSGFSV VIDESSLTGE SEPVMVNAQN
0301: PFLMSGTKVQ DGSCKMMITT VGMRTQWGKL MATLTEGGDD ETPLQVKLNG VATIIGKIGL FFAVVTFAVL VQGMFMRKLS TGTHWVWSGD EALELLEYFA
0401: IAVTIVVVAV PEGLPLAVTL SLAFAMKKMM NDKALVRHLA ACETMGSATT ICSDKTGTLT TNHMTVVKSC ICMNVQDVAN KGSSLQSEIP ESAVKLLIQS
0501: IFNNTGGEVV VNKHGKTELL GTPTETAILE LGLSLGGKFQ EERKSYKVIK VEPFNSTKKR MGVVIELPEG GRMRAHTKGA SEIVLAACDK VVNSSGEVVP
0601: LDEESIKYLN VTINEFANEA LRTLCLAYMD IEGGFSPDDA IPASGFTCVG IVGIKDPVRP GVKESVELCR RAGITVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPVFR EKNQEELLEL IPKIQVMARS SPMDKHTLVK QLRTTFDEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALVVNFS SACLTGSAPL TAVQLLWVNM IMDTLGALAL ATEPPNDELM KRLPVGRRGN FITNAMWRNI LGQAVYQFIV
0901: IWILQAKGKA MFGLDGPDST LMLNTLIFNC FVFCQVFNEI SSREMEEIDV FKGILDNYVF VVVIGATVFF QIIIIEFLGT FASTTPLTIT QWIFSIFIGF
1001: LGMPIAAGLK TIPV

Arabidopsis Description

ACA2Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178V2M5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.