Factsheet for Zm00001d033334_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93815	Sorghum	plastid	92.94	93.03
Os03t0616400-01	Rice	plastid	77.08	77.15
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	75.92	74.76
TraesCS4D01G079200.1	Wheat	plasma membrane	75.53	74.38
TraesCS4B01G080300.1	Wheat	plastid	75.34	74.05
TraesCS4A01G234700.1	Wheat	plastid	74.95	73.67
Zm00001d030893_P004	Maize	plasma membrane	72.24	73.24
GSMUA_Achr4P32520_001	Banana	plasma membrane	57.35	71.7
Zm00001d031341_P001	Maize	plasma membrane	17.02	68.48
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	67.41	68.4
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	67.02	68.21
KRH61405	Soybean	endoplasmic reticulum	67.02	68.01
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	66.34	67.65
PGSC0003DMT400055386	Potato	plasma membrane	65.96	67.13
VIT_07s0129g00180.t01	Wine grape	plasma membrane	66.15	67.12
Solyc04g077870.2.1	Tomato	plasma membrane	65.76	66.93
CDY29571	Canola	plasma membrane	65.47	66.77
CDX72644	Canola	plasma membrane	65.38	66.67
Bra017841.1-P	Field mustard	plasma membrane	65.38	66.67
VIT_18s0001g09150.t01	Wine grape	plasma membrane	65.57	66.6
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	65.38	66.6
CDY49443	Canola	plasma membrane	65.18	66.47
AT4G37640.1	Thale cress	plasma membrane	65.18	66.47
Solyc02g092450.2.1	Tomato	nucleus, unclear	65.28	66.37
Bra039940.1-P	Field mustard	plasma membrane	65.09	66.37
KRH58090	Soybean	cytosol	64.99	66.27
CDX76883	Canola	plasma membrane	64.99	66.27
CDY22420	Canola	plasma membrane	65.09	66.24
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	64.89	66.17
CDY44033	Canola	plasma membrane	65.18	66.14
PGSC0003DMT400055192	Potato	plasma membrane	64.99	66.08
Bra010917.1-P	Field mustard	plasma membrane	64.89	65.98
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	64.8	65.88
CDX90109	Canola	plasma membrane	64.8	65.88
AT1G27770.1	Thale cress	plasma membrane	64.89	65.78
Zm00001d052856_P001	Maize	plasma membrane	64.8	65.69
CDY11764	Canola	plasma membrane	64.6	65.68
Bra010605.1-P	Field mustard	plasma membrane	65.09	65.34
Solyc02g064680.2.1	Tomato	nucleus, unclear	64.22	65.29
Zm00001d031340_P001	Maize	cytosol	49.13	64.3
Zm00001d028093_P001	Maize	plasma membrane	65.18	63.83
VIT_07s0129g00110.t01	Wine grape	plasma membrane	32.59	62.99
Zm00001d023258_P002	Maize	plasma membrane	54.93	54.3
Zm00001d011896_P001	Maize	cytosol, nucleus, plasma membrane	54.93	54.25
Zm00001d042164_P002	Maize	cytosol, nucleus, plasma membrane	54.74	54.16
Zm00001d052457_P001	Maize	plasma membrane	51.64	53.88
Zm00001d038576_P001	Maize	plasma membrane, plastid	53.58	53.22
Zm00001d002396_P012	Maize	nucleus, plasma membrane, plastid	44.78	42.67
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	40.52	41.32
Zm00001d020985_P002	Maize	cytosol, peroxisome, plasma membrane	43.23	39.07
Zm00001d026253_P002	Maize	peroxisome, plasma membrane, plastid	41.3	38.68
Zm00001d015446_P016	Maize	plasma membrane	41.59	38.26
Zm00001d031543_P005	Maize	cytosol	40.04	37.26
Zm00001d043925_P001	Maize	plasma membrane	21.76	35.83
Zm00001d047769_P001	Maize	plasma membrane	28.34	27.59
Zm00001d028687_P001	Maize	extracellular, mitochondrion	28.14	27.43
Zm00001d011013_P001	Maize	plasma membrane	27.66	27.19
Zm00001d033886_P001	Maize	mitochondrion	24.95	26.71

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6KXS4
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	ProteinID:ONM07249.1	InterPro:P-type_ATPase_IIB	PFAM:PF00122
PFAM:PF00689	PFAM:PF00690	PFAM:PF08282	PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF420	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix
UniParc:UPI0002216CAB	EnsemblPlantsGene:Zm00001d033334	EnsemblPlants:Zm00001d033334_P001	EnsemblPlants:Zm00001d033334_T001	SEG:seg	:

Description

Calcium-transporting ATPase 2 plasma membrane-type

Coordinates

chr1:-:259330315..259335837

Molecular Weight (calculated)

111608.0 Da

IEP (calculated)

4.924

GRAVY (calculated)

0.185

Length

1034 amino acids

Sequence
(BLAST)

0001: MHNGVDARPG PLLHLPGASP APCSGRRVPW PRSGLGAALR QPNSPHGRLR FGPLPAGELC KRTHREKLRV AVLVSKSTLQ SDHGASLQSE RVVPQGVKAA
0101: AGFQISADDL ASLVENRDTG KLTLLGQLDG IADKLATSLA DGITTDELSL NQRQGMYGVN KFTESEARSL WEFVWEALQD TTLVILIACA LVSFVVGIAT
0201: EGWPSGAHDG IGIFTSILLV VSVTATSNYQ QSLQFRDLDR EKRKISVQVT RDGFRQRILI DDLLPGDVVH LGVGDQVPAD GLFVSGYSVL VNESSLTGES
0301: EPVVISEDNP FLLSGTKVLD GSCIMLVTAV GMRTQWGKLM AAITESGDDE TPLQGKLNGV ANTIGNIGLF FALLTFVILS QGLVGQKYSD GLLLSWTGED
0401: VLEILEHFAI AVTIVVVAVP EGLPLAVTLS LAFAMKKMMS EKALVRQLSA CETMGSATVI CSDKTGTLTT NRMSVTKACI CGNTMEVNNS SVLSSFSSKV
0501: PEFALQILME SIFNNTAGEV VINQDGKCQI LGTPTEAALL DFALTIGGDF KEKRQETKIV KVEPFNSTKK RMGIILELPG GGYRAHCKGA SEVVLAACDN
0601: FIDARGTIVA LDKTATKKLS DVIETFSKEA LRTLCLAYRE MDDSFSVDEQ IPLQGYTCIG IVGIKDPVRP GVRQSVATCR SAGIAVRMVT GDNINTAKAI
0701: ARECGILTED GIAIEGAEFR EKNPEELLEL IPKMQVLARS SPLDKHALVK YLRTTFNEVV AVTGDGTNDA PALREADIGL AMGIAGTEVA KESADVVILD
0801: DNFSTIVTVA KWGRSVYVNI QKFVQFQLTV NVVALLVNFS SACFTGDAPL TAVQLLWVNM IMDTLGALAL ATEPPDDNLM KKSPVGRTGR FITNVMWRNI
0901: VGQSIFQFVV IWYLQTQGEY LFGLESSEAN TVLNTIIFNT FVFCQVFNEI SSRDMEEINV LKGLPQNSIF MSILGGTIIF QFILVQFLGD FANTTPLTHL
1001: QWLVSILFGL LGMPIAAAIK LIPVEPREDD GRIP

Best Arabidopsis Sequence Match ( AT1G27770.1 )
(BLAST)

0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH

Arabidopsis Description

ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.