Factsheet for VIT_18s0001g09150.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
plastid 1
vacuole 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61405	Soybean	endoplasmic reticulum	83.2	83.12
VIT_07s0129g00180.t01	Wine grape	plasma membrane	82.81	82.73
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	82.71	82.63
GSMUA_Achr4P32520_001	Banana	plasma membrane	66.9	82.35
Solyc04g077870.2.1	Tomato	plasma membrane	82.02	82.19
PGSC0003DMT400055386	Potato	plasma membrane	81.43	81.59
GSMUA_Achr6P16920_001	Banana	cytosol	61.49	81.3
AT1G27770.1	Thale cress	plasma membrane	81.43	81.27
GSMUA_Achr4P10940_001	Banana	cytosol	71.12	81.08
Bra010917.1-P	Field mustard	plasma membrane	80.94	81.02
CDY11764	Canola	plasma membrane	80.84	80.92
CDX90109	Canola	plasma membrane	80.75	80.83
VIT_07s0129g00110.t01	Wine grape	plasma membrane	42.44	80.75
Os12t0586600-01	Rice	plasma membrane	77.9	77.75
KXG23838	Sorghum	plasma membrane	77.8	77.65
TraesCS5D01G080700.1	Wheat	plasma membrane	77.8	77.65
TraesCS5B01G075100.2	Wheat	plasma membrane	77.7	77.55
TraesCS5A01G068700.1	Wheat	plasma membrane	77.6	77.45
Zm00001d030893_P004	Maize	plasma membrane	77.41	77.25
HORVU5Hr1G018160.3	Barley	cytosol	76.33	75.22
Os03t0616400-01	Rice	plastid	68.07	67.09
EER93815	Sorghum	plastid	67.19	66.21
TraesCS4B01G080300.1	Wheat	plastid	67.88	65.68
Zm00001d033334_P001	Maize	plastid	66.6	65.57
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	67.49	65.43
TraesCS4D01G079200.1	Wheat	plasma membrane	67.49	65.43
TraesCS4A01G234700.1	Wheat	plastid	67.39	65.21
VIT_13s0158g00360.t01	Wine grape	plasma membrane	64.15	63.03
VIT_08s0007g08960.t01	Wine grape	plasma membrane	63.65	62.73
VIT_11s0052g00320.t01	Wine grape	plasma membrane	48.53	45.74
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	70.92	44.68
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	43.32	43.79
VIT_09s0018g02130.t01	Wine grape	plasma membrane	48.72	43.7
VIT_05s0020g04380.t01	Wine grape	plasma membrane	43.32	43.58
VIT_14s0030g02110.t01	Wine grape	plasma membrane	42.04	43.28
VIT_05s0020g04390.t01	Wine grape	plastid	42.73	42.98
VIT_14s0030g02080.t01	Wine grape	plasma membrane	44.5	42.58
VIT_05s0020g04300.t01	Wine grape	plasma membrane	43.81	42.56
VIT_05s0020g04350.t01	Wine grape	plasma membrane	13.26	42.45
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	43.42	42.1
VIT_05s0020g04240.t01	Wine grape	plasma membrane	39.59	42.07
VIT_05s0020g04280.t01	Wine grape	plastid	44.11	42.0
VIT_19s0014g01620.t01	Wine grape	plasma membrane	23.58	41.59
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	42.93	40.99
VIT_05s0020g04360.t01	Wine grape	plasma membrane	25.74	36.14
VIT_00s0691g00010.t01	Wine grape	plasma membrane	24.46	31.96
VIT_00s0463g00030.t01	Wine grape	plasma membrane	28.39	28.44
VIT_08s0040g02830.t01	Wine grape	plasma membrane	28.49	27.28
VIT_15s0046g00040.t01	Wine grape	plasma membrane	28.0	27.12
VIT_06s0004g03900.t01	Wine grape	plasma membrane	28.0	26.86
VIT_18s0001g08850.t01	Wine grape	plasma membrane	24.36	26.75
VIT_05s0020g04270.t01	Wine grape	plasma membrane	40.96	23.34
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	43.32	21.5
VIT_05s0020g04220.t01	Wine grape	plastid	42.93	21.25

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100262693	wikigene:100262693	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB45754	ProteinID:CCB45754.1	InterPro:Ca_ATPase_N_dom	UniProt:F6H1A3	EMBL:FN595227
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100262693	wikigene:LOC100262693
InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF12515
PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF221
InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGR:TC56432
TIGR:TC68099	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000198537F	ArrayExpress:VIT_18s0001g09150
EnsemblPlantsGene:VIT_18s0001g09150	EnsemblPlants:VIT_18s0001g09150.t01	unigene:Vvi.9501	RefSeq:XP_002285297	RefSeq:XP_002285297.1	RefSeq:XP_010664516.1
RefSeq:XP_010664517.1	RefSeq:XP_010664518.1	SEG:seg	:	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6H1A3]

Coordinates

chr18:+:7611546..7623220

Molecular Weight (calculated)

111149.0 Da

IEP (calculated)

6.429

GRAVY (calculated)

0.189

Length

1018 amino acids

Sequence
(BLAST)

0001: MESYLNDNFG GVKPKNSSEE ALQRWRKLCW VVKNPKRRFR FTANLSKRFE AQAIRRSNQE KFRVAVLVSQ AALQFIHGLS SDYVAPEEVT AAGFQICADE
0101: LGSIVEGHDL KKLKIHGGVQ GIAEKLSTST TNGIPMADDL LNKRKEIYGI NKFTETKVPG FWVFVWEALH DMTLMILAVC AFVSLLVGII MEGWPKGAHD
0201: GLGIVASILL VVFVTAISDY RQSLQFKDLD TEKKKITVQV TRDGQRQKIS IYDLVPGDIV HLSIGDQVPA DGLFVLGFSL LINESSLTGE SEPVHVNSEN
0301: PFLLSGTKVQ DGSCKMLVTT VGMRTQWGKL MATLSEGGDD ETPLQVKLNG VATIIGKLGL FFAAVTFAVL VQGLFSRKLR EGSHWSWSGD DALEMLEFFA
0401: VAVTIVVVAV PEGLPLAVTL SLAFAMKKMM HDKALVRHLA ACETMGSATS ICSDKTGTLT TNHMTVVKVC ICGKIKEVSS SEETSSFCSG IPDFAVRILL
0501: QSIFNNTGGE IVTNKDNKTE ILGTPTEAAL LEFGLLLGGD FQAERQASKL VKVEPFNSAK KRMGVVLEIP EGGFRAHSKG ASEIVLASCD KVIDSNGDVV
0601: PLNEASFNHL KDTIERFASE ALRTLCLAYM ELGSEFSAES PLPSKGYTCI GIVGIKDPVR PGVKESVAIC RSAGISVRMV TGDNINTAKA IARECGILTD
0701: EGIAIEGPVF REKSEEELQK LIPKIQVMAR SSPLDKHILV KHLRTALEEV VAVTGDGTND APALHEADIG LAMGIAGTEV AKESADVIIM DDNFSTIVTV
0801: GKWGRSIYIN IQKFVQFQLT VNIVALIVNF SSACLTGNAP LTAVQLLWVN MIMDTLGALA LATEPPNDEL MKRSPVGRKE NFISNVMWRN IIGQSLYQFV
0901: IIWFLQTRGK AFFHLDGPDS DLILNTIIFN SFVFCQVFNE INSRELEKIN VFKGMLRNHV FVAVVTCTVV FQIIIVQFLG TFANTSPLTM QQWIGSILLG
1001: FLCMPIAAAL KMIPVDGK

Best Arabidopsis Sequence Match ( AT1G27770.4 )
(BLAST)

0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH

Arabidopsis Description

ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.