Factsheet for VIT_08s0040g02830.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 2
golgi 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95874	Soybean	endoplasmic reticulum	83.16	83.4
KRH67591	Soybean	endoplasmic reticulum	82.97	83.21
Os05t0120700-01	Rice	plasma membrane	21.92	82.92
VIT_06s0004g03900.t01	Wine grape	plasma membrane	82.6	82.75
Zm00001d028687_P001	Maize	extracellular, mitochondrion	77.7	77.85
EER92445	Sorghum	plasma membrane	77.52	77.66
Zm00001d047769_P001	Maize	plasma membrane	77.23	77.31
GSMUA_Achr6P15410_001	Banana	plasma membrane	65.0	77.21
GSMUA_Achr2P16100_001	Banana	plasma membrane	65.76	76.81
Os03t0281600-01	Rice	plasma membrane	60.96	76.69
TraesCS4A01G103000.2	Wheat	unclear	76.58	76.65
TraesCS4B01G201500.2	Wheat	golgi	76.48	76.55
TraesCS4D01G202200.2	Wheat	plasma membrane	76.39	76.46
TraesCS1A01G047000.1	Wheat	plasma membrane	74.79	75.21
TraesCS1D01G047900.1	Wheat	plasma membrane	74.51	75.14
HORVU1Hr1G007310.1	Barley	plasma membrane	74.13	75.12
TraesCS1B01G060700.1	Wheat	golgi	74.6	75.02
Zm00001d011013_P001	Maize	plasma membrane	73.94	74.71
EES18919	Sorghum	plasma membrane	74.22	74.57
HORVU4Hr1G058210.4	Barley	plastid	73.94	72.58
GSMUA_Achr10P...	Banana	plasma membrane	60.77	72.42
GSMUA_Achr3P17740_001	Banana	plasma membrane	68.86	71.84
VIT_15s0046g00040.t01	Wine grape	plasma membrane	66.79	67.55
VIT_18s0001g08850.t01	Wine grape	plasma membrane	41.86	48.0
VIT_19s0014g01620.t01	Wine grape	plasma membrane	15.52	28.6
VIT_13s0158g00360.t01	Wine grape	plasma membrane	27.85	28.57
VIT_18s0001g09150.t01	Wine grape	plasma membrane	27.28	28.49
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	26.72	28.2
VIT_08s0007g08960.t01	Wine grape	plasma membrane	27.19	27.98
VIT_07s0129g00180.t01	Wine grape	plasma membrane	26.72	27.87
VIT_05s0020g04380.t01	Wine grape	plasma membrane	26.43	27.77
VIT_05s0020g04390.t01	Wine grape	plastid	26.15	27.47
VIT_05s0020g04240.t01	Wine grape	plasma membrane	24.46	27.14
VIT_14s0030g02110.t01	Wine grape	plasma membrane	24.93	26.79
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	26.43	26.76
VIT_05s0020g04350.t01	Wine grape	plasma membrane	8.0	26.73
VIT_05s0020g04300.t01	Wine grape	plasma membrane	26.25	26.62
VIT_14s0030g02080.t01	Wine grape	plasma membrane	26.62	26.6
VIT_05s0020g04280.t01	Wine grape	plastid	26.43	26.29
VIT_11s0052g00320.t01	Wine grape	plasma membrane	26.53	26.11
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	26.15	26.08
VIT_09s0018g02130.t01	Wine grape	plasma membrane	26.81	25.11
VIT_05s0020g04360.t01	Wine grape	plasma membrane	16.46	24.14
VIT_00s0691g00010.t01	Wine grape	plasma membrane	17.31	23.62
VIT_07s0129g00110.t01	Wine grape	plasma membrane	11.57	22.99
VIT_00s0463g00030.t01	Wine grape	plasma membrane	19.0	19.88
VIT_05s0020g04270.t01	Wine grape	plasma membrane	25.4	15.11
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	25.87	13.41
VIT_05s0020g04220.t01	Wine grape	plastid	25.59	13.23

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100248326	wikigene:100248326	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB57019	ProteinID:CCB57019.1	UniProt:F6HQX1	EMBL:FN596008	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
EntrezGene:LOC100248326	wikigene:LOC100248326	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF3	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGR:TC55677	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0001983CA6	ArrayExpress:VIT_08s0040g02830	EnsemblPlantsGene:VIT_08s0040g02830	EnsemblPlants:VIT_08s0040g02830.t01	unigene:Vvi.19421
RefSeq:XP_002277306	RefSeq:XP_002277306.1	RefSeq:XP_019077314.1	:	:	:

Description

No Description!

Coordinates

chr8:+:13892016..13899105

Molecular Weight (calculated)

116094.0 Da

IEP (calculated)

5.209

GRAVY (calculated)

0.034

Length

1063 amino acids

Sequence
(BLAST)

0001: MGKGGEDYGK REVSSSKVSG PEVFPAWGRE VQECEKHYGV SRRSGLSSSD VEKRRKIYGL NELEKHEGPS IWSLILEQFQ DTLVRILLVA AVISFVLAWY
0101: DGEEGGETEI TAFVEPLVIF LILIANAIVG VWQENNAEKA LEALKEIQSE QAAVIRNNQR IPNLPAKELV PGDIVELKVG DKVPADMRVV ELISSTLRLE
0201: QGSLTGESEA VNKTNKPVPE DADIQGKRCM VFAGTTVVNG NCICLVTQTG METEIGKVHT QIHVASQSEE DTPLKKKLNE FGESLTVIIG VICALVWLIN
0301: VKYFLNWEYV DGWPSNFKFS FEKCTYYFKI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVAKLVA
0401: MGSRAGALRK FRVDGTTYSP FDGKIHDWPC GRMDANLQMI AKISAVCNDA GVAQSEHKYV ANGMPTEAAL KVLVEKMGPP AVDDDKSFSS SGDLLRCCQR
0501: WNENERRIAT LEFDRDRKSM GVIVNSHSGK KSLLVKGAVE NLLERSNSVQ LLDGSVVELG DNSRSLILEA LHEMSSGALR CLGFAYKDEL PDFATYDGDE
0601: NHPAHGLLLN PANYSSIERN LTFVGLVGLR DPPRAEVHQA IEDCRAAGIR VMVITGDNKN TAEAICHEIG VFGPNEDIRS KSLTGKEFME LRDQKAHLRQ
0701: NGGLLFSRAE PRHKQEIVRL LKEDGEVVAM TGDGVNDAPA LKLADIGIAM GIAGTEVAKE ASDMVLADDN FSTIVAAVGE GRSIYNNMKA FIRYMISSNI
0801: GEVASIFLTA ALGIPEGLIP VQLLWVNLVT DGPPATALGF NPPDRDIMKK PPRRSDDSLI SAWILFRYLV IGLYVGIATV GVFVIWYTHS SFLGIDLSGD
0901: GHTLVTYTQL ADWGQCSSWE NFTISPFTAG AQVFTFNDNP CDYFQGGKVK ATTLSLSVLV AIEMFNSLNA LSEDGSLLVM PPWVNPWLLV AMSVSFGLHF
1001: LILYVPVLAQ VFGIVPLSLN EWLLVLAVAF PVILIDEILK LVGRCTSGFQ TSSTRKSLKP KSE

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.