Factsheet for Zm00001d028687_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92445	Sorghum	plasma membrane	98.21	98.21
Zm00001d047769_P001	Maize	plasma membrane	97.27	97.18
Os03t0281600-01	Rice	plasma membrane	75.68	95.03
TraesCS4B01G201500.2	Wheat	golgi	91.8	91.71
TraesCS4D01G202200.2	Wheat	plasma membrane	91.71	91.62
TraesCS4A01G103000.2	Wheat	unclear	91.71	91.62
HORVU4Hr1G058210.4	Barley	plastid	88.6	86.8
CDY06279	Canola	plasma membrane	30.25	85.6
CDX95122	Canola	cytosol, plasma membrane, vacuole	23.94	83.01
GSMUA_Achr2P16100_001	Banana	plasma membrane	67.95	79.23
Zm00001d011013_P001	Maize	plasma membrane	78.32	78.99
VIT_06s0004g03900.t01	Wine grape	plasma membrane	77.76	77.76
VIT_08s0040g02830.t01	Wine grape	plasma membrane	77.85	77.7
AT1G07810.1	Thale cress	plasma membrane	77.57	77.57
AT1G07670.2	Thale cress	plasma membrane	77.47	77.47
CDY06268	Canola	plasma membrane	74.46	77.45
CDY09907	Canola	plasma membrane	74.18	77.31
Bra031593.1-P	Field mustard	plasma membrane	77.1	77.17
KRG95874	Soybean	endoplasmic reticulum	77.0	77.08
Bra031583.1-P	Field mustard	plasma membrane	69.84	76.87
KRH67591	Soybean	endoplasmic reticulum	76.72	76.79
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	75.49	75.49
PGSC0003DMT400040184	Potato	plasma membrane	75.4	75.4
CDY22720	Canola	peroxisome, plasma membrane	70.59	74.38
CDY28053	Canola	plasma membrane	75.97	74.08
CDY35928	Canola	plasma membrane	71.82	73.13
Bra029645.1-P	Field mustard	plasma membrane, plastid	76.72	68.17
CDY68458	Canola	cytosol, peroxisome, plasma membrane	42.6	67.87
CDY61305	Canola	cytosol	28.75	62.63
Zm00001d033886_P001	Maize	mitochondrion	43.73	48.03
Zm00001d030893_P004	Maize	plasma membrane	27.71	28.82
Zm00001d031340_P001	Maize	cytosol	21.21	28.48
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	26.96	28.21
Zm00001d033334_P001	Maize	plastid	27.43	28.14
Zm00001d052856_P001	Maize	plasma membrane	27.05	28.14
Zm00001d031341_P001	Maize	plasma membrane	6.79	28.02
Zm00001d002396_P012	Maize	nucleus, plasma membrane, plastid	28.28	27.65
Zm00001d052457_P001	Maize	plasma membrane	25.73	27.55
Zm00001d038576_P001	Maize	plasma membrane, plastid	26.86	27.38
Zm00001d023258_P002	Maize	plasma membrane	26.77	27.15
Zm00001d028093_P001	Maize	plasma membrane	26.48	26.61
Zm00001d011896_P001	Maize	cytosol, nucleus, plasma membrane	26.11	26.46
Zm00001d042164_P002	Maize	cytosol, nucleus, plasma membrane	25.35	25.74
Zm00001d026253_P002	Maize	peroxisome, plasma membrane, plastid	26.01	25.0
Zm00001d020985_P002	Maize	cytosol, peroxisome, plasma membrane	26.96	25.0
Zm00001d015446_P016	Maize	plasma membrane	26.2	24.73
Zm00001d031543_P005	Maize	cytosol	25.64	24.48
Zm00001d043925_P001	Maize	plasma membrane	14.33	24.2

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1D6JYK5
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	ProteinID:ONL96730.1	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF12710
PFAM:PF13246	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF3	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0008451EA1	EnsemblPlantsGene:Zm00001d028687	EnsemblPlants:Zm00001d028687_P001	EnsemblPlants:Zm00001d028687_T001	SEG:seg

Description

calcium pump2 calcium pump2

Coordinates

chr1:-:43083284..43088852

Molecular Weight (calculated)

115302.0 Da

IEP (calculated)

5.194

GRAVY (calculated)

0.116

Length

1061 amino acids

Sequence
(BLAST)

0001: MGKGGQDEGK RRAGSAASDP DPAAPVFPAW ARTPSECLAE LGVSADRGLS SEEAAARLQR YGPNELERHA PPSVWKLVLE QFDDTLVRIL LLAAVVSFVL
0101: ALYDGAEGGE VGVTAFVEPL VIFLILIVNA VVGVWQESNA EKALEALKEI QSEHATVKRH GRWSHGLPAR DLVPGDIVEL RVGDKVPADM RVLQLISSTL
0201: RVEQGSLTGE TASVNKTSHK IELEDTDIQG KECMVFAGTT VVNGSAVCVV TGTGMATEIG KIHAQIQEAS QEEDDTPLKK KLNEFGEALT AIIGVICALV
0301: WLINLKYFLS WEYVDGWPRN FKFSFEKCTY YFEIAVALAV AAIPEGLPAV ITTCLALGTR KMAQKNALVR KLPSVETLGC TTVICSDKTG TLTTNQMSAV
0401: KLVAIGRWPD TLRSFKVDGT TYDPTDGKIH DWPSLSMDEN LQMIAKIAAV CNDASIAHAE HQYVATGMPT EAALKVLVEK MGLPGGYTPS LDSSDLLRCC
0501: QWWNNAAKRV ATLEFDRTRK SMGVIVKVDS GKNVLLVKGA VENLLERCTH IQLLDGSVVL LDDGAKALIL STLREMSASA LRCLGFAYKD ELSEFATYDG
0601: EDHAAHKYLL DPSYYSSIES NMIFCGFVGL RDPPREEVHT AIEDCRAAGI RVMVITGDNK ETAEAICHEI GVFGPHEDIS SKSFTGKEFM ALSDKKKLLR
0701: QQCGLLFSRA EPKHKQEIVR LLKEDGEVVA MTGDGVNDAP ALKLADIGVA MGITGTEVAK EASDMVLADD NFSTIVAAVG EGRSIYNNMK AFIRYMISSN
0801: IGEVASIFLT SALGIPEGLI PVQLLWVNLV TDGPPATALG FNPPDKDIMK KPPRRSDDSL ITPWILFRYM VIGLYVGVAT VGIFIIWYTH GSFLGIDLAS
0901: DGHTLVSYSQ LSNWGQCSSW EGFKVSPFTA GARTFSFDAN PCDYFQGGKI KATTLSLSVL VAIEMFNSLN ALSEDGSLLS MPPWVNPWLL LAMSVSFGLH
1001: FLILYVPFLA QVFGIVPLSL NEWLLVIAVA LPVVLIDEVL KFVGRCLTAR ARKQSGKRKA E

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.