CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06279	Canola	plasma membrane	34.01	98.67
Bra031593.1-P	Field mustard	plasma membrane	92.56	95.0
CDY35928	Canola	plasma membrane	90.17	94.15
CDY09907	Canola	plasma membrane	87.32	93.32
CDY06268	Canola	plasma membrane	87.41	93.24
CDX95122	Canola	cytosol, plasma membrane, vacuole	25.92	92.16
AT1G07670.2	Thale cress	plasma membrane	89.71	91.99
CDY22720	Canola	peroxisome, plasma membrane	84.83	91.66
AT1G07810.1	Thale cress	plasma membrane	89.25	91.52
CDY68458	Canola	cytosol, peroxisome, plasma membrane	54.5	89.04
Os05t0120700-01	Rice	plasma membrane	21.14	81.85
VIT_06s0004g03900.t01	Wine grape	plasma membrane	77.57	79.55
PGSC0003DMT400040184	Potato	plasma membrane	76.29	78.23
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	76.1	78.04
KRG95874	Soybean	endoplasmic reticulum	75.92	77.92
KRH67591	Soybean	endoplasmic reticulum	75.18	77.17
Zm00001d047769_P001	Maize	plasma membrane	74.36	76.18
EER92445	Sorghum	plasma membrane	74.17	76.06
Zm00001d028687_P001	Maize	extracellular, mitochondrion	74.08	75.97
CDY61305	Canola	cytosol	33.73	75.36
Os03t0281600-01	Rice	plasma membrane	57.54	74.08
TraesCS4A01G103000.2	Wheat	unclear	72.15	73.92
TraesCS1D01G047900.1	Wheat	plasma membrane	71.6	73.91
HORVU1Hr1G007310.1	Barley	plasma membrane	71.23	73.88
TraesCS4B01G201500.2	Wheat	golgi	72.06	73.82
TraesCS4D01G202200.2	Wheat	plasma membrane	71.97	73.73
TraesCS1A01G047000.1	Wheat	plasma membrane	71.51	73.6
TraesCS1B01G060700.1	Wheat	golgi	71.51	73.6
GSMUA_Achr2P16100_001	Banana	plasma membrane	61.21	73.19
GSMUA_Achr6P15410_001	Banana	plasma membrane	59.93	72.85
EES18919	Sorghum	plasma membrane	69.94	71.93
Zm00001d011013_P001	Maize	plasma membrane	69.03	71.39
HORVU4Hr1G058210.4	Barley	plastid	69.85	70.18
GSMUA_Achr10P...	Banana	plasma membrane	55.88	68.16
GSMUA_Achr3P17740_001	Banana	plasma membrane	63.69	68.01
CDY07153	Canola	plasma membrane	61.31	63.28
CDY51719	Canola	plasma membrane	61.21	63.19
CDY70305	Canola	plasma membrane	11.12	49.19
CDY22604	Canola	plasma membrane	44.12	48.1
CDX94924	Canola	plasma membrane	35.57	46.68
CDY53835	Canola	nucleus, plasma membrane, plastid	12.13	42.86
CDX93457	Canola	cytosol, nucleus, plasma membrane	38.6	34.85
CDY19574	Canola	plasma membrane	16.64	30.07
CDY14779	Canola	plasma membrane	26.01	28.5
CDY06915	Canola	plasma membrane	26.38	27.81
CDY22420	Canola	plasma membrane	25.64	27.46
CDX72049	Canola	plasma membrane	25.83	27.41
CDY44033	Canola	plasma membrane	25.55	27.28
CDY06114	Canola	plasma membrane	25.64	27.22
CDY49443	Canola	plasma membrane	25.37	27.22
CDX76883	Canola	plasma membrane	25.37	27.22
CDX72644	Canola	plasma membrane	25.28	27.12
CDY29571	Canola	plasma membrane	25.28	27.12
CDX90109	Canola	plasma membrane	25.28	27.04
CDY10680	Canola	plasma membrane	25.18	27.02
CDY11764	Canola	plasma membrane	25.18	26.94
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	25.37	26.93
CDY65295	Canola	cytosol	6.53	26.79
CDX82212	Canola	plasma membrane	26.84	26.79
CDY32412	Canola	plasma membrane	26.84	26.79
CDY33829	Canola	plasma membrane	25.18	26.73
CDX93910	Canola	plasma membrane	25.37	26.72
CDY38264	Canola	plasma membrane	26.29	26.65
CDY27537	Canola	plasma membrane	26.75	26.65
CDY37311	Canola	plasma membrane	26.65	26.58
CDY20693	Canola	cytosol	26.1	26.54
CDY10319	Canola	plasma membrane	24.91	26.44
CDY50072	Canola	plasma membrane	26.56	26.39
CDY40822	Canola	plasma membrane	24.63	26.38
CDY34219	Canola	plasma membrane	24.63	26.35
CDY19575	Canola	plasma membrane	26.38	26.21
CDY32902	Canola	plasma membrane	26.19	25.4
CDY46716	Canola	cytosol	25.0	25.35
CDX89371	Canola	plasma membrane	7.81	25.3
CDY43534	Canola	cytosol	24.54	25.19
CDX68595	Canola	plasma membrane	24.45	25.14
CDY30184	Canola	plasma membrane	24.54	25.14
CDY53981	Canola	cytosol	26.19	24.61
CDY38720	Canola	plasma membrane	20.04	22.88
CDX89375	Canola	plasma membrane	20.5	21.63
CDX94389	Canola	plasma membrane	20.22	21.46
CDY38719	Canola	plasma membrane	18.75	21.34
CDX94386	Canola	cytosol	19.94	20.63
CDY65296	Canola	cytosol	1.1	18.18
CDX95120	Canola	mitochondrion	0.64	4.86

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078GTV4
UniProt:A0A078GTV4	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY28053	ProteinID:CDY28053	ProteinID:CDY28053.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00038993001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF4	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI0004EE28F0	:	:	:	:	:

Description

BnaC05g44550DBnaC05g44550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTV4]

Coordinates

chrLK032213:-:396538..401666

Molecular Weight (calculated)

118905.0 Da

IEP (calculated)

4.767

GRAVY (calculated)

0.029

Length

1088 amino acids

Sequence
(BLAST)

0001: MIRSEIHSES IDTTSIHICK GLSVEEEKYL ERSSDPLFNS ISVTDLMGKG GDEDKQSNGS EPLKLDTFPA WAKDVGECEE RFGVSVERGL SSSEVLTRHQ
0101: IYGLNELEKP EGTSLLKLIL EQFNDTLVRI LLAAAVISFV LALVDGDEGG EMGITAFVEP LVIFLILIVN AIVGIWQETN AEKALEALKE IQSQQATVTR
0201: DGVKVSSLPA KELVPGDVVE LRVGDKVPAD MRVVGLVSST LRVEQGSLTG ESEAVSKTTK AVEENADIQG KKCMVFAGTT VVNGSCVCLV THTGMSTEIG
0301: RVHSQIQEAA QHEEDTPLKK KLNEFGEALT LIIGLICALV WLINVKYFLS WEYVDGWPRN FKFSFEKCTY YFEIAVALAV AAIPEGLPAV ITTCLALGTR
0401: KMAQKNALVR KLPSVETLGC TTVICSDKTG TLTTNQMAVS KIVAMGSRIG TLRSFNVEGT SFDPRDGEID DWPVGRMDKN LQMIAKIAAV CNDASVEQSE
0501: NQFVARGMPT EAALKVLVEK MGFPEGANKA SSLADGNGLR CCGLWSELEH RIATLEFDRD RKSMGVMVDS SSGRKLLLVK GAVENVLERS THIQLLDGST
0601: QELDQYSRDL ILQSLHDMSM SALRCLGFAY SDVPSDFATY DGSEDHPAHQ QLLNPSNYSS IESNLTFVGF VGLRDPPRKE VHNKSTAEAI CREIGVFEAD
0701: EDISSRSLTG KEFMDVKDQK NHLRQSGGLL FSRAEPKHKQ EIVRLLKEDG EVVAMTGDGV NDAPALKLAD IGVAMGISGT EVAKEASDMV LADDNFSTIV
0801: AAVGEGRSIY NNMKAFIRYM ISSNIGEVAS IFLTAALGIP EGMIPVQLLW VNLVTDGPPA TALGFNPPDK DIMKKPPRRS DDSLITAWIL FRYLVIGMYV
0901: GVATVGVFII WYTHSSFMGI DLSQDGHSLV SYSQLAHWDQ CSSWEGFKVS PFTAGSQTFS FESNPCEYFH QGKIKASTLS LSVLVAIEMF NSLNALSEDG
1001: SLVTMPPWVN PWLLLAMAVS FGLHFVILYV PFLAQVFGIV PLSLNEWLLV LAVSLPVILI DEVLKFVGRC TSGYRYSPRT PSEKKKTE

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.