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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY70305 Canola plasma membrane 29.07 97.97
Solyc07g022790.2.1 Tomato plasma membrane 39.93 83.59
CDY53835 Canola nucleus, plasma membrane, plastid 31.0 83.44
CDY22604 Canola plasma membrane 95.78 79.56
AT1G10130.1 Thale cress plasma membrane 95.66 79.46
Solyc07g022780.2.1 Tomato mitochondrion 34.98 79.23
VIT_18s0001g08850.t01 Wine grape plasma membrane 83.35 74.54
KRH61432 Soybean plasma membrane 83.59 69.23
Bra019960.1-P Field mustard plasma membrane 85.65 67.94
GSMUA_Achr6P23080_001 Banana plasma membrane 80.7 67.92
CDX93457 Canola cytosol, nucleus, plasma membrane 98.31 67.63
KXG37640 Sorghum plasma membrane 78.65 65.2
HORVU4Hr1G010200.3 Barley plasma membrane 78.65 65.2
TraesCS4A01G253500.1 Wheat peroxisome 78.53 65.1
TraesCS4B01G061900.1 Wheat plasma membrane 78.53 65.1
TraesCS4D01G060900.1 Wheat plasma membrane 78.53 65.1
Zm00001d033886_P001 Maize mitochondrion 75.03 64.39
Os03t0730800-01 Rice plasma membrane 42.82 55.47
CDY06279 Canola plasma membrane 23.04 50.93
CDX95122 Canola cytosol, plasma membrane, vacuole 17.61 47.71
CDY22720 Canola peroxisome, plasma membrane 45.24 37.24
CDY06268 Canola plasma membrane 45.72 37.16
CDY09907 Canola plasma membrane 45.36 36.94
CDY07153 Canola plasma membrane 46.92 36.91
CDY51719 Canola plasma membrane 46.68 36.72
CDY28053 Canola plasma membrane 46.68 35.57
CDY35928 Canola plasma membrane 42.94 34.17
CDY65296 Canola cytosol 2.53 31.82
CDY19574 Canola plasma membrane 21.59 29.73
CDY65295 Canola cytosol 8.81 27.55
CDX89371 Canola plasma membrane 10.98 27.08
CDY68458 Canola cytosol, peroxisome, plasma membrane 21.23 26.43
CDY40822 Canola plasma membrane 27.62 22.54
CDY34219 Canola plasma membrane 27.62 22.52
CDY10680 Canola plasma membrane 27.26 22.29
CDX76883 Canola plasma membrane 27.26 22.29
CDX93910 Canola plasma membrane 27.74 22.27
CDY49443 Canola plasma membrane 27.14 22.19
CDY14779 Canola plasma membrane 26.54 22.16
CDY10319 Canola plasma membrane 27.38 22.15
CDY22420 Canola plasma membrane 27.02 22.05
CDY38264 Canola plasma membrane 28.47 21.99
CDY44033 Canola plasma membrane 27.02 21.98
CDY11764 Canola plasma membrane 26.9 21.93
CDY20693 Canola cytosol 28.23 21.87
CDX90109 Canola plasma membrane 26.78 21.83
CDY29571 Canola plasma membrane 26.66 21.79
CDY43534 Canola cytosol 27.86 21.79
CDX72644 Canola plasma membrane 26.54 21.7
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 26.78 21.66
CDY30184 Canola plasma membrane 27.74 21.66
CDX68595 Canola plasma membrane 27.62 21.64
CDY46716 Canola cytosol 27.74 21.44
CDY27537 Canola plasma membrane 28.23 21.43
CDY06915 Canola plasma membrane 26.66 21.41
CDY06114 Canola plasma membrane 26.42 21.37
CDX72049 Canola plasma membrane 26.42 21.37
CDY33829 Canola plasma membrane 26.42 21.37
CDX82212 Canola plasma membrane 27.86 21.19
CDY32412 Canola plasma membrane 27.86 21.19
CDY37311 Canola plasma membrane 27.86 21.17
CDY19575 Canola plasma membrane 27.74 21.0
CDY61305 Canola cytosol 12.3 20.94
CDY50072 Canola plasma membrane 27.5 20.82
CDY32902 Canola plasma membrane 27.99 20.68
CDY53981 Canola cytosol 28.23 20.21
CDX94389 Canola plasma membrane 23.64 19.12
CDX89375 Canola plasma membrane 23.64 19.01
CDY38720 Canola plasma membrane 20.87 18.15
CDX94386 Canola cytosol 22.68 17.87
CDY38719 Canola plasma membrane 19.9 17.26
CDX95120 Canola mitochondrion 0.72 4.17
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078E2V1
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDX94924
ProteinID:CDX94924ProteinID:CDX94924.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005388GO:GO:0005488GO:GO:0005575GO:GO:0006810GO:GO:0006816GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00100400001InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:IPR023299InterPro:P-type_ATPase_IIAPFAM:PF00122PFAM:PF00689PFAM:PF00702
PFAM:PF13246PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF39
InterPro:P_typ_ATPaseSUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01116
TIGRFAMs:TIGR01494TMHMM:TMhelixUniParc:UPI0004EF2EF3SEG:seg::
Description
BnaC05g07470D
Coordinates
chrLK031886:-:154369..162221
Molecular Weight (calculated)
90886.4 Da
IEP (calculated)
7.051
GRAVY (calculated)
0.179
Length
829 amino acids
Sequence
(BLAST)
001: MWFFSCRINS KCCSVEKDVD CPLTTNAVYQ DKKNILFSGT DVVAGRGRAV VVGVGSNTAM GSIHDSMLHT DDEATPLKKK LDEFGSFLAK VIAGICVLVW
101: VVNIGHFSDP SHGGFFKGAI HYFKIAVALA VAAIPEGLPA VVTTCLALGT KKMARLNAIV RSLPSVETLG CTTVICSDKT GTLTTNMMSV SKICVVQSTD
201: HGPVINEFSV SGTTYAPEGT VFDNNGQQLD FPAQSPCLHH LAMCSSLCND SILQYNPDKD SYEKIGESTE VALRVLAEKV GLPGFDSMPS ALNMLSKHER
301: AAYCNHYWEN QFKKVYVLEF TRDRKMMSVL CSHKQMDVMF SKGAPESIIA RCTKLLCNSD GSVVPLTAAS RAELESRFHS FGDETLRCLA LAFKTVPHGQ
401: QTISYDNEND LTFIGLVGML DPPRKEVRDA MLACMTAGIR VIVVTGDNKS TAESICRKIG AFDNLVDFSG LSYTASEFER LPAVQQNLAL RRMTLFSRVE
501: PSHKRMLVEA LQNQNEVVAM TGDGVNDAPA LKKADIGIAM GSGTAVAKSA SDMVLADDNF ASIVAAVAEG RAIYNNTKQF IRYMISSNIG EVVCIFVAAV
601: LGIPDTLAPV QLLWVNLVTD GLPATAIGFN KQDSDVMKAK PRKVGEAVVT GWLFFRYLVI GVYVGLATVA GFIWWFVYSE GGPKLTYSEL MNFETCALRE
701: TSYPCSIFED RHPSTVAMTV LVVVEMFNAL NNLSENQSLL VITPRSNLWL VGSIILTMVL HMLILYVHPL AVLFSVTPLS WAEWTAVLYL SFPVIIIDEV
801: LKFLSRNTGL RFRFRLRKTD LLPKDRRDK
Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)
001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK
Arabidopsis Description
ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.