CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016926.1-P	Field mustard	plasma membrane	98.49	94.77
CDY06915	Canola	plasma membrane	98.49	94.77
AT2G41560.1	Thale cress	plasma membrane	92.14	88.83
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	85.2	82.54
CDX72049	Canola	plasma membrane	85.1	82.44
CDY33829	Canola	plasma membrane	84.89	82.24
CDY06114	Canola	plasma membrane	84.89	82.24
GSMUA_Achr9P17740_001	Banana	plasma membrane	56.8	69.54
VIT_08s0007g08960.t01	Wine grape	plasma membrane	72.31	69.51
KRG95209	Soybean	plasma membrane	72.41	69.47
KRH66886	Soybean	plasma membrane	72.0	68.95
PGSC0003DMT400021028	Potato	plasma membrane	65.06	68.72
Solyc10g079300.1.1	Tomato	plasma membrane	64.55	68.26
KRH33214	Soybean	endoplasmic reticulum	71.1	68.21
KRH72028	Soybean	cytosol, nucleus, plasma membrane	71.0	68.12
Solyc04g016260.2.1	Tomato	unclear	70.09	66.73
PGSC0003DMT400033064	Potato	plasma membrane	70.09	66.54
GSMUA_Achr5P08080_001	Banana	plasma membrane	56.7	66.47
EES16530	Sorghum	plasma membrane	68.28	65.38
TraesCS5D01G142900.2	Wheat	plasma membrane	67.77	64.96
TraesCS5A01G136200.1	Wheat	plasma membrane	67.67	64.86
TraesCS5B01G135200.1	Wheat	plasma membrane	67.57	64.77
HORVU5Hr1G043640.2	Barley	cytosol	67.47	64.67
Os12t0136900-00	Rice	plasma membrane	67.27	64.29
EES07943	Sorghum	plasma membrane	66.87	64.03
Os11t0140400-01	Rice	cytosol	57.6	63.7
HORVU3Hr1G102890.1	Barley	plasma membrane	66.47	63.28
Os01t0939100-01	Rice	plasma membrane	66.16	62.99
Zm00001d052457_P001	Maize	plasma membrane	62.84	62.97
Zm00001d042164_P002	Maize	cytosol, nucleus, plasma membrane	66.16	62.87
OQU88174	Sorghum	cytosol, nucleus, plasma membrane	66.16	62.81
TraesCS3A01G475500.1	Wheat	plasma membrane	65.96	62.8
CDX72644	Canola	plasma membrane	64.05	62.72
CDY29571	Canola	plasma membrane	64.05	62.72
TraesCS3D01G470100.1	Wheat	plasma membrane	65.76	62.61
TraesCS3B01G519000.1	Wheat	plasma membrane	65.66	62.51
Zm00001d011896_P001	Maize	cytosol, nucleus, plasma membrane	65.86	62.46
CDY22420	Canola	plasma membrane	63.65	62.2
CDY44033	Canola	plasma membrane	63.65	62.02
Zm00001d023258_P002	Maize	plasma membrane	65.26	61.95
CDY49443	Canola	plasma membrane	62.74	61.44
CDX76883	Canola	plasma membrane	62.64	61.34
EES18436	Sorghum	plasma membrane	64.15	61.13
TraesCS1D01G312500.1	Wheat	plasma membrane	64.05	61.04
TraesCS1B01G324000.1	Wheat	plasma membrane	63.95	60.94
TraesCS1A01G312300.1	Wheat	plasma membrane	63.24	60.27
Zm00001d038576_P001	Maize	plasma membrane, plastid	63.14	60.23
CDY11764	Canola	plasma membrane	61.53	60.08
CDX90109	Canola	plasma membrane	61.43	59.98
HORVU1Hr1G067550.14	Barley	nucleus	64.15	59.87
Os05t0495600-00	Rice	plasma membrane	61.93	58.18
CDY19574	Canola	plasma membrane	29.81	49.17
CDX89371	Canola	plasma membrane	15.91	47.02
CDY20693	Canola	cytosol	48.04	44.58
CDY38264	Canola	plasma membrane	48.14	44.55
CDX68595	Canola	plasma membrane	47.43	44.52
CDY37311	Canola	plasma membrane	48.84	44.45
CDY43534	Canola	cytosol	47.43	44.43
CDX82212	Canola	plasma membrane	48.74	44.4
CDY32412	Canola	plasma membrane	48.64	44.31
CDY46716	Canola	cytosol	47.83	44.27
CDY27537	Canola	plasma membrane	48.64	44.23
CDY50072	Canola	plasma membrane	48.64	44.11
CDY19575	Canola	plasma membrane	48.64	44.11
CDY30184	Canola	plasma membrane	47.13	44.07
CDY65295	Canola	cytosol	11.58	43.4
CDY32902	Canola	plasma membrane	48.14	42.6
CDY10680	Canola	plasma membrane	43.1	42.21
CDY40822	Canola	plasma membrane	42.9	41.93
CDY34219	Canola	plasma membrane	42.9	41.89
CDY10319	Canola	plasma membrane	42.9	41.56
CDX93910	Canola	plasma membrane	43.2	41.53
CDY53981	Canola	cytosol	48.24	41.36
CDX89375	Canola	plasma membrane	37.36	35.98
CDX94386	Canola	cytosol	37.97	35.84
CDX94389	Canola	plasma membrane	36.76	35.61
CDY65296	Canola	cytosol	2.32	34.85
CDY53835	Canola	nucleus, plasma membrane, plastid	10.67	34.42
CDY38720	Canola	plasma membrane	31.92	33.26
CDY38719	Canola	plasma membrane	31.42	32.64
CDY06279	Canola	plasma membrane	10.88	28.8
CDY22720	Canola	peroxisome, plasma membrane	28.0	27.61
CDY06268	Canola	plasma membrane	27.29	26.57
CDY22604	Canola	plasma membrane	26.69	26.55
CDX94924	Canola	plasma membrane	22.16	26.54
CDY09907	Canola	plasma membrane	27.19	26.52
CDY51719	Canola	plasma membrane	28.0	26.38
CDY07153	Canola	plasma membrane	27.9	26.28
CDY28053	Canola	plasma membrane	28.5	26.01
CDY35928	Canola	plasma membrane	26.79	25.53
CDX95122	Canola	cytosol, plasma membrane, vacuole	7.85	25.49
CDY68458	Canola	cytosol, peroxisome, plasma membrane	16.92	25.23
CDY61305	Canola	cytosol	10.98	22.38
CDX93457	Canola	cytosol, nucleus, plasma membrane	24.97	20.58
CDY70305	Canola	plasma membrane	4.93	19.92
CDX95120	Canola	mitochondrion	0.3	2.08

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078FPF0
UniProt:A0A078FPF0	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY14779	ProteinID:CDY14779	ProteinID:CDY14779.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0070588	GO:GO:0099132	EnsemblPlantsGene:GSBRNA2T00084641001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF296
InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI0004EDBEC4	SEG:seg	:	:

Description

BnaC04g47760DCalcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078FPF0]

Coordinates

chrLK032047:-:327552..333664

Molecular Weight (calculated)

107812.0 Da

IEP (calculated)

5.165

GRAVY (calculated)

0.197

Length

993 amino acids

Sequence
(BLAST)

001: MIRNIPDLDK RAENETKRHQ IQEKLRVAFY VQKAALQFIG AAGRPEYKLT DEVKEAGFSV EPDELASMVR NHDTRGLANN GGVVALAKKV SVSDLNEGVK
101: SSELPIREKI FGENRYAEKP PRSFLMFVWE ALQDITLIIL MVCAVVSIGV GVATEGFPKG MYDGTGILLS ILLVVMVTAI SDYKQSLQFI DLDREKKKII
201: VQVTRDGTRQ EISIHDLVVG DVVHLSIGDQ VPADGVFISG YNLEIDESSL SGESEPSHVN KQKPFLLAGT KVQNGSAKML VTTVGMRTEW GKLMETLVDG
301: GEDETPLQVK LNGVATIIGK IGLSFAVLTF LVLCVRFVLE KATAGSFTNW SSEDALTLLD YFAISVTIIV VAVPEGLPLA VTLSLAFAMK KLMSDRALVR
401: HLAACETMGS ATCICTDKTG TLTTNHMVVN KVYICDNVHE RQESFQLKLP EEVQSILLQG IFQNTGSEVV KDKDGDTQIL GSPTERAILE FGLLLGGDFG
501: EQRKEHKILK IEPFNSDKKK MSVLIALPGG GARAFCKGAS EIVLKMCENV VDSNGETVPL TEELIKNISD VIEGFASEAL RTLCLVYKDL DEAPSGDLPD
601: GGYTMVAVVG IKDPVRPGVR EAVETCQAAG ITVRMVTGDN ISTAKAIAKE CGIFTEGGLA IEGSQFRDLP PHEMRAIIPK IQVMARSLPL DKHTLVSNLR
701: KIGEVVAVTG DGTNDAPALH EADIGLAMGI AGTEVAKENA DVIIMDDNFK TIVKVARWGR AVYINIQKFV QFQLTVNVVA LIINFVSACI TGSAPLTAVQ
801: LLWVNMIMDT LGALALATEP PNEGLMKRPP IARTASFITK TMWRNIAGQS VYQLIVLGTL NFAGKSLLDL NGPDSTAVLN TVIFNSFVFC QVFNEVNSRE
901: IEKINVFTGM FNSWVFTGVM VVTVVFQVII VEFLGAFAST VPLTWQHWLL SILIGSLSMI VAVILKCIPV ESSRQHHDGY DLLPSGPSSS NSA

Best Arabidopsis Sequence Match ( AT2G41560.1 )
(BLAST)

0001: MSNLLRDFEV EAKNPSLEAR QRWRSSVSIV KNRTRRFRNI RDLDKLADYE NKKHQIQEKI RVAFFVQKAA LHFIDAAARP EYKLTDEVKK AGFSIEADEL
0101: ASMVRKNDTK SLAQKGGVEE LAKKVSVSLS EGIRSSEVPI REKIFGENRY TEKPARSFLM FVWEALHDIT LIILMVCAVV SIGVGVATEG FPRGMYDGTG
0201: ILLSILLVVM VTAISDYKQS LQFRDLDREK KKIIVQVTRD GSRQEISIHD LVVGDVVHLS IGDQVPADGI FISGYNLEID ESSLSGESEP SHVNKEKPFL
0301: LSGTKVQNGS AKMLVTTVGM RTEWGKLMET LVDGGEDETP LQVKLNGVAT IIGKIGLSFA VLTFVVLCIR FVLDKATSGS FTNWSSEDAL TLLDYFAISV
0401: TIIVVAVPEG LPLAVTLSLA FAMKKLMSDR ALVRHLAACE TMGSSTCICT DKTGTLTTNH MVVNKVWICD KVQERQEGSK ESFELELSEE VQSTLLQGIF
0501: QNTGSEVVKD KDGNTQILGS PTERAILEFG LLLGGDFNTQ RKEHKILKIE PFNSDKKKMS VLIALPGGGA RAFCKGASEI VLKMCENVVD SNGESVPLTE
0601: ERITSISDII EGFASEALRT LCLVYKDLDE APSGELPDGG YTMVAVVGIK DPVRPGVREA VQTCQAAGIT VRMVTGDNIS TAKAIAKECG IYTEGGLAIE
0701: GSEFRDLSPH EMRAIIPKIQ VMARSLPLDK HTLVSNLRKI GEVVAVTGDG TNDAPALHEA DIGLAMGIAG TEVAKENADV IIMDDNFKTI VNVARWGRAV
0801: YINIQKFVQF QLTVNVVALI INFVSACITG SAPLTAVQLL WVNMIMDTLG ALALATEPPN EGLMKRAPIA RTASFITKTM WRNIAGQSVY QLIVLGILNF
0901: AGKSLLKLDG PDSTAVLNTV IFNSFVFCQV FNEINSREIE KINVFKGMFN SWVFTWVMTV TVVFQVIIVE FLGAFASTVP LSWQHWLLSI LIGSLNMIVA
1001: VILKCVPVES RHHHDGYDLL PSGPSSSNSA

Arabidopsis Description

ACA4Calcium-transporting ATPase 4, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:O22218]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.