Factsheet for TraesCS1A01G312300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G324000.1	Wheat	plasma membrane	96.74	96.74
TraesCS1D01G312500.1	Wheat	plasma membrane	96.45	96.45
HORVU1Hr1G067550.14	Barley	nucleus	94.53	92.58
EES18436	Sorghum	plasma membrane	84.84	84.84
Zm00001d038576_P001	Maize	plasma membrane, plastid	83.3	83.38
Os05t0495600-00	Rice	plasma membrane	77.16	76.06
TraesCS5A01G136200.1	Wheat	plasma membrane	66.51	66.89
KRH23922	Soybean	plasma membrane	53.26	65.14
VIT_08s0007g08960.t01	Wine grape	plasma membrane	63.72	64.28
VIT_13s0158g00360.t01	Wine grape	plasma membrane	63.15	63.51
KRH33214	Soybean	endoplasmic reticulum	63.05	63.48
CDY14779	Canola	plasma membrane	60.27	63.24
AT3G57330.1	Thale cress	cytosol, peroxisome, plasma membrane, plastid	62.09	63.12
Bra003276.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	62.09	63.12
KRH72028	Soybean	cytosol, nucleus, plasma membrane	62.67	63.09
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	62.0	63.02
KRH66886	Soybean	plasma membrane	62.67	62.97
CDY33829	Canola	plasma membrane	61.9	62.93
AT2G41560.1	Thale cress	plasma membrane	62.19	62.91
KRG95209	Soybean	plasma membrane	62.48	62.9
Bra016926.1-P	Field mustard	plasma membrane	62.19	62.79
CDY06915	Canola	plasma membrane	62.09	62.69
CDY06114	Canola	plasma membrane	61.52	62.54
CDX72049	Canola	plasma membrane	61.32	62.34
Bra007319.1-P	Field mustard	plasma membrane	61.04	62.29
PGSC0003DMT400021028	Potato	plasma membrane	56.14	62.23
KRH39871	Soybean	plasma membrane, plastid	62.0	62.06
Solyc10g079300.1.1	Tomato	plasma membrane	55.57	61.66
PGSC0003DMT400033064	Potato	plasma membrane	61.32	61.09
Solyc04g016260.2.1	Tomato	unclear	61.13	61.07
TraesCS3A01G475500.1	Wheat	plasma membrane	60.27	60.21
TraesCS4A01G046800.3	Wheat	plasma membrane	57.97	59.22
TraesCS5A01G068700.1	Wheat	plasma membrane	57.1	58.33
TraesCS4A01G234700.1	Wheat	plastid	54.03	53.52
TraesCS2A01G432700.1	Wheat	plastid, unclear	44.53	42.92
TraesCS7A01G254400.1	Wheat	plasma membrane	44.05	42.38
TraesCS5A01G276700.4	Wheat	plasma membrane	44.53	42.22
TraesCS6A01G152700.2	Wheat	cytosol	44.05	41.96
TraesCS1A01G332800.1	Wheat	plastid	39.25	39.94
TraesCS1A01G161100.1	Wheat	mitochondrion	25.14	35.36
TraesCS4A01G253500.1	Wheat	peroxisome	25.14	26.2
TraesCS1A01G047000.1	Wheat	plasma membrane	26.2	25.83
TraesCS4A01G103000.2	Wheat	unclear	25.91	25.42

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:Ca_ATPase_N_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF12515	PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093
PANTHER:PTHR24093:SF337	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1A01G312300	EnsemblPlants:TraesCS1A01G312300.1
TIGR:cd02081	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:504270881..504284093

Molecular Weight (calculated)

114418.0 Da

IEP (calculated)

6.426

GRAVY (calculated)

0.224

Length

1042 amino acids

Sequence
(BLAST)

0001: MEGGGSSWAS MEGYLNEYFH IPAKNPPSDA RLRWRRAVGL VVRNRRRRFR EFSALGAIDD AQRRRILGKV QVVINVHRAA LHFINGVKQY HLTHELAEEG
0101: FSISPDELAE ITGMREDSTI LKLHGGTSGI SRKIKASLQD GVNEIEITTR QKLYGTNMHA EKPARSFWMF VWDALHDLTL NILIVCALVS LVVGLATEGW
0201: PKGIYDGLGI ILSILLVVLV TASSDYKQSR KFMELDREKQ KIYVLVTRDK KTKKVLIQDL VVGDILHLSI GDVVPADGLF ISGYCLLVDE SSLSGESEPI
0301: QVSEEKPFLH GGSKVVDGTA KMLVTAVGSR TEWGKIMGTL SDNGVDETPL QVKLNGVATI IGQIGLVFAI LTFVVLLARF LVNKGMDVGL MNWSANDALT
0401: IVNYFAIAVT IIVVAVPEGL PLAVTLSLAF AMKKLMNDKA LVRHLAACET MGSVSCICTD KTGTLTTNHM IVDMVWIGNI SKSVNGDSKI TELKSVISER
0501: SMAILIQGIF VNTGSEVVKG DDGKRTILGT PTEAALLEFG LTVEGDRYTE YNKIRRVRVE PFNSVKKKMS VIIHLPNGGF RSFCKGAPEI ILEHCDTMLN
0601: GEGDIVPLSD MQKQNVLNII NSFASEALRT LCIAFQDLNE FSDEQTIPEN GYTLIALFGI KDPVRPGVRD AVMTCMAAGI TVRMVTGDNI NTAKAIAKEC
0701: GILTEDGIAI EGRELHGKSE DELRELLPKI QVMARSLPMD KFKLVTSLKS MYQEVVAVTG DGTNDAPALC ESDIGLAMGI AGTEVAKENA DVIIMDDNFK
0801: TIINVARWGR AVYVNIQKFV QFQLTVNIVA LIVNFVSACV IGTAPLTAVQ LLWVNMIMDT LGALALATEP PNDEMMKWSP VRRGDSFITK VMWRNILGQA
0901: LYQLLVLGTL MIVGKRLLDI EGPTADKTIN TLIFNSFVFC QVFNEINSRE MDKINVFRGI FRNWIFVGIL TATVIFQVII VELLGTFANT VPLSLELWSL
1001: SVVLGSVSMI VSVILKCIPV ESGKRFTKPH GYELIPEGPE AL

Best Arabidopsis Sequence Match ( AT2G41560.1 )
(BLAST)

0001: MSNLLRDFEV EAKNPSLEAR QRWRSSVSIV KNRTRRFRNI RDLDKLADYE NKKHQIQEKI RVAFFVQKAA LHFIDAAARP EYKLTDEVKK AGFSIEADEL
0101: ASMVRKNDTK SLAQKGGVEE LAKKVSVSLS EGIRSSEVPI REKIFGENRY TEKPARSFLM FVWEALHDIT LIILMVCAVV SIGVGVATEG FPRGMYDGTG
0201: ILLSILLVVM VTAISDYKQS LQFRDLDREK KKIIVQVTRD GSRQEISIHD LVVGDVVHLS IGDQVPADGI FISGYNLEID ESSLSGESEP SHVNKEKPFL
0301: LSGTKVQNGS AKMLVTTVGM RTEWGKLMET LVDGGEDETP LQVKLNGVAT IIGKIGLSFA VLTFVVLCIR FVLDKATSGS FTNWSSEDAL TLLDYFAISV
0401: TIIVVAVPEG LPLAVTLSLA FAMKKLMSDR ALVRHLAACE TMGSSTCICT DKTGTLTTNH MVVNKVWICD KVQERQEGSK ESFELELSEE VQSTLLQGIF
0501: QNTGSEVVKD KDGNTQILGS PTERAILEFG LLLGGDFNTQ RKEHKILKIE PFNSDKKKMS VLIALPGGGA RAFCKGASEI VLKMCENVVD SNGESVPLTE
0601: ERITSISDII EGFASEALRT LCLVYKDLDE APSGELPDGG YTMVAVVGIK DPVRPGVREA VQTCQAAGIT VRMVTGDNIS TAKAIAKECG IYTEGGLAIE
0701: GSEFRDLSPH EMRAIIPKIQ VMARSLPLDK HTLVSNLRKI GEVVAVTGDG TNDAPALHEA DIGLAMGIAG TEVAKENADV IIMDDNFKTI VNVARWGRAV
0801: YINIQKFVQF QLTVNVVALI INFVSACITG SAPLTAVQLL WVNMIMDTLG ALALATEPPN EGLMKRAPIA RTASFITKTM WRNIAGQSVY QLIVLGILNF
0901: AGKSLLKLDG PDSTAVLNTV IFNSFVFCQV FNEINSREIE KINVFKGMFN SWVFTWVMTV TVVFQVIIVE FLGAFASTVP LSWQHWLLSI LIGSLNMIVA
1001: VILKCVPVES RHHHDGYDLL PSGPSSSNSA

Arabidopsis Description

ACA4Calcium-transporting ATPase 4, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:O22218]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.