Factsheet for TraesCS1A01G161100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G245000.1	plasma membrane
TraesCS3A01G490100.1	plasma membrane
TraesCS3B01G275000.1	plasma membrane
TraesCS3B01G550900.1	plasma membrane
TraesCS3B01G551200.1	plasma membrane
TraesCS3D01G246500.1	plasma membrane
TraesCS3D01G496100.1	plasma membrane
TraesCS7A01G533800.1	plasma membrane
TraesCS7D01G521200.1	plasma membrane
TraesCSU01G171600.1	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63380.1	TraesCS7A01G533800.1	AT1G75820.1	22535420
AT3G63380.1	TraesCS7D01G521200.1	AT1G75820.1	22535420
AT3G63380.1	TraesCSU01G171600.1	AT1G75820.1	22535420
AT3G63380.1	TraesCS3A01G245000.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3A01G490100.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3B01G275000.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3B01G550900.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3B01G551200.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3D01G246500.1	AT4G39400.1	22535420
AT3G63380.1	TraesCS3D01G496100.1	AT4G39400.1	22535420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062826	Potato	plasma membrane	20.92	44.41
PGSC0003DMT400096083	Potato	plasma membrane	18.49	44.05
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	48.45	41.45
PGSC0003DMT400097702	Potato	plasma membrane	19.43	40.34
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	52.63	40.25
Solyc01g097400.1.1	Tomato	cytosol	14.84	40.0
TraesCS1A01G332800.1	Wheat	plastid	53.85	38.96
EER91614	Sorghum	plasma membrane	50.47	36.96
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	50.07	36.59
Os10t0418100-01	Rice	golgi	49.66	35.56
VIT_05s0020g04350.t01	Wine grape	plasma membrane	15.25	35.53
KRH67272	Soybean	peroxisome, plasma membrane	40.22	32.53
VIT_14s0030g02110.t01	Wine grape	plasma membrane	41.97	31.45
VIT_05s0020g04380.t01	Wine grape	plasma membrane	42.65	31.23
GSMUA_Achr4P10650_001	Banana	mitochondrion	33.33	31.19
AT3G22910.1	Thale cress	plasma membrane	42.78	31.17
VIT_05s0020g04390.t01	Wine grape	plastid	42.38	31.03
KRG93759	Soybean	plastid	42.65	30.71
Bra033900.1-P	Field mustard	plasma membrane	41.97	30.64
KRH41701	Soybean	mitochondrion	40.76	30.63
CDY10680	Canola	plasma membrane	41.84	30.57
CDY40822	Canola	plasma membrane	41.84	30.51
Bra023790.1-P	Field mustard	plasma membrane	41.84	30.48
CDY34219	Canola	plasma membrane	41.84	30.48
CDY10319	Canola	plasma membrane	41.97	30.34
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	42.91	30.29
VIT_05s0020g04300.t01	Wine grape	plasma membrane	42.78	30.25
KRH29171	Soybean	plasma membrane	38.73	30.18
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	40.35	29.69
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	15.38	29.69
GSMUA_Achr7P25650_001	Banana	plasma membrane	29.55	29.59
KRG95593	Soybean	plasma membrane	42.65	29.56
VIT_05s0020g04240.t01	Wine grape	plasma membrane	38.19	29.54
CDX93910	Canola	plasma membrane	40.89	29.33
VIT_05s0020g04280.t01	Wine grape	plastid	42.24	29.28
AT3G63380.1	Thale cress	plasma membrane	40.62	29.14
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	41.43	28.8
VIT_14s0030g02080.t01	Wine grape	plasma membrane	41.3	28.76
PGSC0003DMT400050008	Potato	plasma membrane	38.87	28.63
TraesCS6A01G152700.2	Wheat	cytosol	39.95	27.06
TraesCS2A01G432700.1	Wheat	plastid, unclear	39.0	26.73
Zm00001d043925_P001	Maize	plasma membrane	22.4	26.43
PGSC0003DMT400089589	Potato	plasma membrane	28.07	26.43
TraesCS5A01G276700.4	Wheat	plasma membrane	38.87	26.21
TraesCS3A01G475500.1	Wheat	plasma membrane	36.71	26.08
TraesCS7A01G254400.1	Wheat	plasma membrane	37.92	25.95
TraesCS5A01G136200.1	Wheat	plasma membrane	36.03	25.77
TraesCS5A01G068700.1	Wheat	plasma membrane	35.09	25.49
VIT_19s0014g01620.t01	Wine grape	plasma membrane	19.7	25.3
TraesCS1A01G312300.1	Wheat	plasma membrane	35.36	25.14
TraesCS4A01G046800.3	Wheat	plasma membrane	33.6	24.41
TraesCS4A01G234700.1	Wheat	plastid	33.87	23.86
PGSC0003DMT400096782	Potato	plasma membrane	20.65	23.61
VIT_05s0020g04360.t01	Wine grape	plasma membrane	23.08	23.59
PGSC0003DMT400094259	Potato	plasma membrane	28.61	23.53
PGSC0003DMT400048740	Potato	plastid	32.52	23.44
PGSC0003DMT400089336	Potato	plasma membrane	28.34	23.2
PGSC0003DMT400093936	Potato	plasma membrane	38.6	23.2
Solyc09g082870.1.1	Tomato	plasma membrane	32.25	22.17
VIT_05s0020g04270.t01	Wine grape	plasma membrane	39.14	16.23
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	42.65	15.41
VIT_05s0020g04220.t01	Wine grape	plastid	42.38	15.27
TraesCS1A01G047000.1	Wheat	plasma membrane	21.46	15.04
TraesCS4A01G253500.1	Wheat	peroxisome	20.24	15.0
TraesCS4A01G103000.2	Wheat	unclear	20.51	14.31

Protein Annotations

EnsemblPlants:TraesCS1A01G161100.1	EnsemblPlantsGene:TraesCS1A01G161100	Gene3D:1.20.1110.10	Gene3D:2.70.150.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PANTHER:PTHR24093	PANTHER:PTHR24093:SF304	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	SEG:seg
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:-:289630792..289633845

Molecular Weight (calculated)

79897.4 Da

IEP (calculated)

8.707

GRAVY (calculated)

0.228

Length

741 amino acids

Sequence
(BLAST)

001: MPNPRGGRLA EAGRRWRKAL NVVRTLLRWL APVRVLPLSA SYVAIDMNDG NKPDADAATH IRYETPGADV RIDILGAAAH SFNFKSLVKE KRQCSFRRLG
101: GAAEIAALLN SHPERGIDER VYDMRCRKAQ HGENTYPESK PRGFFIHFRD AHRDVFLVAL LACSVISLAF GIKEHRLREG CYDGAGIFLA VLLVSGLSAH
201: STHNQDKRAH NDASDSAKIT VSRDAGTRVV LIFDVVVGDV VILHTGDTVP ADGVFLNGHD LHVDETDITG EPQAIEINAE NSPFLAAGVK VICGHGSMLV
301: TAVGTNTSWG GPWSSLSTMS IHPEPLRTRV ESIISTVTKV GQAATVVTVT VLAARHFTGS AAGKLPLLDK GVPLAVALMI TFSMKRVLKD NALVHHLSAL
401: ETMASVTVIC ICTGRLTHNE MKATNEACAK AGVAVKMLTA DDIAASRAVA TECGIISSND TGDVTIITGP EFRNMPHARQ VERVDEIRVI AMSGPLDKLV
501: LEKRLKKKGH VLAEGTNDKS DEVITAIQSG RCMYNNFQKI IQFYLTVNIV ATVVDFVAAI TACDAPLSSV QLLWVNLAMG ALGALALAAD TPTDALMDGP
601: PIARTAPLIS DAMWRNLIAQ AGFQIAVLLV LQHLAAQDNK GTVVFNVFML FQVFNQFNVR GVEKKNAFAG VLKNKMFLVI ITLMFVLQVV TMEVLTRFVG
701: AKKLGLWQWG ACVAVAAGSC TVGWAVKFIP VPVGSLTRLA F

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.