Factsheet for GSMUA_Achr4P10650_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
endoplasmic reticulum 1
mitochondrion 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001	plasma membrane
GSMUA_Achr3P26680_001	plasma membrane
GSMUA_Achr4P08920_001	plasma membrane
GSMUA_Achr6P35950_001	plasma membrane
GSMUA_Achr9P24170_001	plasma membrane
GSMUA_AchrUn_...	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63380.1	GSMUA_Achr3P26680_001	AT1G75820.1	22535420
AT3G63380.1	GSMUA_Achr9P24170_001	AT1G75820.1	22535420
AT3G63380.1	GSMUA_Achr1P05250_001	AT4G39400.1	22535420
AT3G63380.1	GSMUA_Achr4P08920_001	AT4G39400.1	22535420
AT3G63380.1	GSMUA_Achr6P35950_001	AT4G39400.1	22535420
AT3G63380.1	GSMUA_AchrUn_...	AT4G39400.1	22535420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25650_001	Banana	plasma membrane	67.8	72.57
Solyc01g097400.1.1	Tomato	cytosol	19.95	57.45
PGSC0003DMT400096083	Potato	plasma membrane	22.47	57.23
PGSC0003DMT400062826	Potato	plasma membrane	24.87	56.45
PGSC0003DMT400097702	Potato	plasma membrane	23.11	51.26
TraesCS1D01G066500.1	Wheat	mitochondrion	54.17	50.83
TraesCS1D01G335500.1	Wheat	plastid	63.51	49.46
TraesCS1B01G346400.1	Wheat	plastid	63.51	49.31
TraesCSU01G003600.1	Wheat	plastid	63.26	49.31
TraesCS1D01G335400.1	Wheat	plastid	63.38	49.22
HORVU1Hr1G076950.3	Barley	plastid	63.76	49.12
EER91614	Sorghum	plasma membrane	62.75	49.11
TraesCS1A01G332800.1	Wheat	plastid	63.38	49.02
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	62.5	48.82
VIT_05s0020g04350.t01	Wine grape	plasma membrane	19.44	48.43
KRH67272	Soybean	peroxisome, plasma membrane	55.93	48.36
Os10t0418100-01	Rice	golgi	63.13	48.31
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	19.44	47.98
VIT_05s0020g04390.t01	Wine grape	plastid	60.1	47.04
VIT_05s0020g04380.t01	Wine grape	plasma membrane	59.72	46.74
KRH41701	Soybean	mitochondrion	58.08	46.65
VIT_19s0014g01620.t01	Wine grape	plasma membrane	33.59	46.1
VIT_05s0020g04300.t01	Wine grape	plasma membrane	60.23	45.52
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	59.85	45.14
KRH29171	Soybean	plasma membrane	53.91	44.9
VIT_05s0020g04240.t01	Wine grape	plasma membrane	54.29	44.89
KRG93759	Soybean	plastid	58.21	44.8
VIT_05s0020g04280.t01	Wine grape	plastid	60.35	44.71
VIT_14s0030g02110.t01	Wine grape	plasma membrane	55.68	44.59
CDY40822	Canola	plasma membrane	57.2	44.59
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	59.97	44.56
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	56.57	44.49
Bra023790.1-P	Field mustard	plasma membrane	57.07	44.44
CDX93910	Canola	plasma membrane	57.95	44.43
CDY34219	Canola	plasma membrane	56.82	44.25
AT3G63380.1	Thale cress	plasma membrane	57.7	44.24
Bra033900.1-P	Field mustard	plasma membrane	56.31	43.94
CDY10680	Canola	plasma membrane	56.19	43.89
KRG95593	Soybean	plasma membrane	59.22	43.87
AT3G22910.1	Thale cress	plasma membrane	56.06	43.66
VIT_14s0030g02080.t01	Wine grape	plasma membrane	58.46	43.52
CDY10319	Canola	plasma membrane	56.31	43.51
PGSC0003DMT400050008	Potato	plasma membrane	54.92	43.24
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	45.33	41.45
PGSC0003DMT400089589	Potato	plasma membrane	40.91	41.17
PGSC0003DMT400096782	Potato	plasma membrane	33.59	41.05
VIT_05s0020g04360.t01	Wine grape	plasma membrane	35.98	39.31
Zm00001d043925_P001	Maize	plasma membrane	31.06	39.17
GSMUA_AchrUn_...	Banana	plasma membrane	43.69	39.14
GSMUA_Achr4P10940_001	Banana	cytosol	43.43	38.52
GSMUA_Achr4P32520_001	Banana	plasma membrane	40.15	38.45
PGSC0003DMT400089336	Potato	plasma membrane	42.42	37.13
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	45.33	37.05
GSMUA_Achr6P16920_001	Banana	cytosol	35.1	36.1
GSMUA_Achr1P23580_001	Banana	plasma membrane	48.74	35.77
PGSC0003DMT400093936	Potato	plasma membrane	55.56	35.69
GSMUA_Achr5P08080_001	Banana	plasma membrane	37.37	34.95
GSMUA_Achr9P17740_001	Banana	plasma membrane	34.97	34.16
GSMUA_AchrUn_...	Banana	plasma membrane	48.74	33.57
TraesCS1A01G161100.1	Wheat	mitochondrion	31.19	33.33
GSMUA_AchrUn_...	Banana	plasma membrane	21.84	32.77
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	15.66	32.29
PGSC0003DMT400094259	Potato	plasma membrane	35.86	31.52
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	44.7	30.76
PGSC0003DMT400048740	Potato	plastid	38.64	29.77
Solyc09g082870.1.1	Tomato	plasma membrane	37.88	27.83
VIT_05s0020g04270.t01	Wine grape	plasma membrane	56.69	25.13
GSMUA_Achr2P16100_001	Banana	plasma membrane	28.16	24.51
GSMUA_Achr6P15410_001	Banana	plasma membrane	27.15	24.02
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	16.04	23.56
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	60.1	23.21
VIT_05s0020g04220.t01	Wine grape	plastid	60.1	23.15
GSMUA_Achr1P04000_001	Banana	plasma membrane	26.26	22.54
GSMUA_Achr10P...	Banana	plasma membrane	25.13	22.31
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	44.07	21.6
GSMUA_Achr3P17740_001	Banana	plasma membrane	27.78	21.59
GSMUA_Achr6P23080_001	Banana	plasma membrane	26.14	21.02
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	9.85	20.16

Protein Annotations

Gene3D:1.20.1110.10	MapMan:24.1.2.1.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr4G10650_001
EnsemblPlants:GSMUA_Achr4P10650_001	EnsemblPlants:GSMUA_Achr4T10650_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
UniProt:M0SMT2	PFAM:PF00122	PFAM:PF00689	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF292	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002951967	SEG:seg	:

Description

Putative calcium-transporting ATPase 12, plasma membrane-type [Source:GMGC_GENE;Acc:GSMUA_Achr4G10650_001]

Coordinates

chr4:+:7737749..7741895

Molecular Weight (calculated)

86851.2 Da

IEP (calculated)

5.336

GRAVY (calculated)

0.047

Length

792 amino acids

Sequence
(BLAST)

001: MEYAFFIASD RRASVPQKRW RIAFTMIYSC RAMCSLSKKR ITGALRTPSY VSLEIVDDDD DECRAPAPPF SIVDADVLKS LVRERRLDEV QRLGGADGIA
101: AGLASDAEAG ISGGGGELDA RREAFGANTY PKTKPKGFFW FHGLKEGWYD GASIFLAIFL CNDISVSIGD QVPGDGLFLQ GHSLQIDESS MTGESHPVDV
201: DAVKNPFLTS GVKVIDGYAS MIITAVGTDT AWGEMMSTIA RETTEPTPLQ ERLERLTSSI GKIGVVVAVL VFAVDAGDVI SVIVSIFQDA VTIIVVAIPE
301: GLPLAVTLTL AFSMKRMMKD NAMVRRLSAC ETMGSVTTIC TDKTGTLTLN QMTVTKFWIG NEEVPVDGGS ISSIAPRVRT LPTEKALLWW AVLDLGMDVE
401: EMKRRYSVVH VEAFNSEKKR SGVLVEEKDS RAMITQWKGA AEMILIRCSH YLDRNGNVRD VDVESRTKLE KTPNLDDNGL TLLGFVGLKD PCRPEVESAI
501: AACRRAGVAV KMITGDNVFT ARAIAIECGI LRDDDIRVMA RSSPFDKLLM VQCLKSKGHV VAVTGDGTND APALKEADVG LSMGIQGTEV AKESSDVVIL
601: NDNFDTVVTV MRWGRCVYNN IQKFLQFQLT VNIAALVINF VSAISTGEVP LTTVQLLWVN LIMDTMGALA LATDRPTKEL MKKPPSIFGV SEEVNNTLIF
701: NTFVLCQVFN EFNARKLEKK NVMMVEFLRE FAGTVRLDWE QWGICVGEGF GGLLWLKALK LKRLLLKTQA NQRLESDSQS QKRGFSCPQT LS

Best Arabidopsis Sequence Match ( AT3G63380.1 )
(BLAST)

0001: MRDLKEYDYS ALLLNLTTSS LNKAQRRWRF AYAAIYSMRA MLSLVKEIVP ARIDPKTSDA SLSLSYTALE SGEGAKINSM PLSYVPAIDQ EQLVEIMKGK
0101: DLPGIQALGG VEGVAASLRT NPTKGIHGNE QEVSRRRDLF GSNTYHKPPP KGLLFFVYEA FKDLTILILL VCAIFSLGFG IKEHGIKEGW YEGGSIFVAV
0201: FLVIVVSALS NFRQERQFDK LSKISNNIKV EVLRDSRRQH ISIFDVVVGD VVFLKIGDQI PADGLFLEGH SLQVDESSMT GESDHLEVDH KDNPFLFSGT
0301: KIVDGFAQML VVSVGMSTTW GQTMSSINQD SSERTPLQVR LDTLTSTIGK IGLTVAALVL VVLLVRYFTG NTEKEGKREY NGSKTPVDTV VNSVVRIVAA
0401: AVTIVVVAIP EGLPLAVTLT LAYSMKRMMS DQAMVRKLSA CETMGSATVI CTDKTGTLTL NEMKVTKFWL GQESIHEDST KMISPDVLDL LYQGTGLNTT
0501: GSVCVSDSGS TPEFSGSPTE KALLSWTVLN LGMDMESVKQ KHEVLRVETF SSAKKRSGVL VRRKSDNTVH VHWKGAAEMV LAMCSHYYTS TGSVDLMDST
0601: AKSRIQAIIQ GMAASSLRCI AFAHKIASND SVLEEDGLTL MGIVGLKDPC RPGVSKAVET CKLAGVTIKM ITGDNVFTAK AIAFECGILD HNDKDEEDAV
0701: VEGVQFRNYT DEERMQKVDK IRVMARSSPS DKLLMVKCLR LKGHVVAVTG DGTNDAPALK EADIGLSMGI QGTEVAKESS DIVILDDNFA SVATVLKWGR
0801: CVYNNIQKFI QFQLTVNVAA LVINFIAAIS AGEVPLTAVQ LLWVNLIMDT LGALALATER PTNELLKRKP VGRTEALITN VMWRNLLVQS LYQIAVLLIL
0901: QFKGMSIFSV RKEVKDTLIF NTFVLCQVFN EFNAREMEKK NVFKGLHRNR LFIGIIAITI VLQVIMVEFL KKFADTVRLN GWQWGTCIAL ASLSWPIGFF
1001: TKFIPVSETP FLSYFKNPRS LFKGSRSPSL KKP

Arabidopsis Description

ACA12Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VEV7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.