Factsheet for GSMUA_Achr6P15410_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06279	Canola	plasma membrane	33.3	79.47
CDX95122	Canola	cytosol, plasma membrane, vacuole	25.59	74.84
GSMUA_Achr3P17740_001	Banana	plasma membrane	82.35	72.33
GSMUA_Achr10P...	Banana	plasma membrane	72.07	72.31
GSMUA_Achr2P16100_001	Banana	plasma membrane	73.52	72.31
KRG95874	Soybean	endoplasmic reticulum	77.32	65.28
VIT_06s0004g03900.t01	Wine grape	plasma membrane	77.21	65.13
VIT_08s0040g02830.t01	Wine grape	plasma membrane	77.21	65.0
KRH67591	Soybean	endoplasmic reticulum	76.98	65.0
AT1G07810.1	Thale cress	plasma membrane	75.31	63.52
AT1G07670.2	Thale cress	plasma membrane	74.86	63.15
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	74.86	63.15
PGSC0003DMT400040184	Potato	plasma membrane	74.75	63.05
Bra031593.1-P	Field mustard	plasma membrane	74.64	63.02
CDY22720	Canola	peroxisome, plasma membrane	70.5	62.66
CDY06268	Canola	plasma membrane	70.95	62.25
CDY09907	Canola	plasma membrane	70.73	62.18
Bra031583.1-P	Field mustard	plasma membrane	65.81	61.1
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	36.31	60.3
CDY28053	Canola	plasma membrane	72.85	59.93
CDY35928	Canola	plasma membrane	68.04	58.45
Bra029645.1-P	Field mustard	plasma membrane, plastid	74.41	55.78
GSMUA_Achr1P04000_001	Banana	plasma membrane	56.31	54.6
CDY68458	Canola	cytosol, peroxisome, plasma membrane	36.65	49.25
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	20.78	48.06
CDY61305	Canola	cytosol	23.69	43.53
GSMUA_Achr6P23080_001	Banana	plasma membrane	43.35	39.39
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	11.4	31.78
GSMUA_Achr7P25650_001	Banana	plasma membrane	23.58	28.51
GSMUA_Achr6P16920_001	Banana	cytosol	23.91	27.79
GSMUA_Achr4P32520_001	Banana	plasma membrane	25.47	27.57
GSMUA_Achr9P17740_001	Banana	plasma membrane	24.92	27.5
GSMUA_Achr4P10650_001	Banana	mitochondrion	24.02	27.15
GSMUA_Achr5P08080_001	Banana	plasma membrane	24.69	26.09
GSMUA_Achr4P10940_001	Banana	cytosol	25.36	25.42
GSMUA_AchrUn_...	Banana	plasma membrane	24.47	24.77
GSMUA_Achr1P23580_001	Banana	plasma membrane	27.82	23.08
GSMUA_AchrUn_...	Banana	plasma membrane	27.93	21.74
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	26.37	20.5
GSMUA_AchrUn_...	Banana	plasma membrane	10.5	17.8
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	27.26	15.1

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr6G15410_001	EnsemblPlants:GSMUA_Achr6P15410_001	EnsemblPlants:GSMUA_Achr6T15410_001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	UniProt:M0T789	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF3
InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI000294BAE7	:	:	:	:

Description

Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:GMGC_GENE;Acc:GSMUA_Achr6G15410_001]

Coordinates

chr6:-:10267262..10275448

Molecular Weight (calculated)

98310.4 Da

IEP (calculated)

6.243

GRAVY (calculated)

0.106

Length

895 amino acids

Sequence
(BLAST)

001: MHHQICVPAL LDPKHFTMEV SIKKRARDII TPNKFTDITL HDASRKFPEV SAKYGLRSDE VLTRREIYGL NELEKHSGPS IWHLVLEQFK DTLVRILLVA
101: AVVSFECMVF AGTTVVNGSC VCLVTQTGMN TEIGKIHSQI HEASQSEEDT PLKKKLNEFG EVLTAIIGVI CAVVWLINKC TYYFEIAVAL AVAAIPEGLP
201: AVITTCLALG TRKMAQKNAL VRKLPSVETL GCTTVICSDK TGTLTTNQMS VVRLVAMGRW TDTLRTFKVD GTTYNPRDGK IHEWPSSDMD ANLQIIAKIA
301: AVCNDSSISQ SGHHFVTSGM PTEAALKVLV EKMGLPGDCD TSLVDSDDIL KCCKWWNEMA QRVATLEFDR IRKSMGVIVK SKSGTNCLLV KGAVENLLER
401: SSYIQLLDGS VVLLDDRSKS LILDALHDMS TNQLRCLGFA YKDDLTEFAT YDGEDHPAHK LLLDPSNYSS IETGLIFVGL VGLRDPPRKE VHKAIEDCRT
501: AGIRVMVITG DNKETAEAIC RDIGVFTLDE DIHSKSFTGK DFMSRSSNEK KSLLRQNGGL LFSRAEPRHK QEIVRLLKED GEVVAMTGDG VNDAPALKMA
601: DIGIAMGIAG TEVAKEASDM VLADDNFNTI VAAVGEGRSI YNNMKAFIRY MISSNIGEVA SIFLTAALGI PEGLIPVQLL WVNLVTDGPP ATALGFNPPD
701: NDIMKKPPRR SDDSLITAWI LFRYMVIGLY VGIATVGIFI IWYTHGSFAG IDLSGDGHTL VTYSQLSNWG ECSSWEGFKT GKVKAMTLSL SVLVAIEMFN
801: SLNALSEDGS LLSMPPWANP WLLLAMSISF GLHFLILYVP FLAQVFGIVP LSFNEWLLVL VVAFPVILID EVLKFVGRCT NSSGAKRRPT KHKDE

Best Arabidopsis Sequence Match ( AT1G07810.1 )
(BLAST)

0001: MGKGSEDLVK KESLNSTPVN SDTFPAWAKD VAECEEHFVV SREKGLSSDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPM GRMDANLQMI AKIAAICNDA NVEQSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG DVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGNKL LLVKGAVENV LERSTHIQLL DGSKRELDQY SRDLILQSLR DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLI FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGIEFMDVQ DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DMVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHSSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTLSTKQKE E

Arabidopsis Description

ECA1Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:P92939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.