Factsheet for GSMUA_Achr3P17740_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 1
peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P15410_001	Banana	plasma membrane	72.33	82.35
CDY06279	Canola	plasma membrane	29.73	80.8
GSMUA_Achr10P...	Banana	plasma membrane	69.87	79.82
CDX95122	Canola	cytosol, plasma membrane, vacuole	23.06	76.8
GSMUA_Achr2P16100_001	Banana	plasma membrane	68.2	76.37
KRH67591	Soybean	endoplasmic reticulum	71.93	69.15
KRG95874	Soybean	endoplasmic reticulum	71.93	69.15
VIT_06s0004g03900.t01	Wine grape	plasma membrane	71.84	68.99
VIT_08s0040g02830.t01	Wine grape	plasma membrane	71.84	68.86
CDY09907	Canola	plasma membrane	67.71	67.78
CDY06268	Canola	plasma membrane	67.71	67.65
AT1G07810.1	Thale cress	plasma membrane	70.36	67.58
AT1G07670.2	Thale cress	plasma membrane	69.97	67.2
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	69.97	67.2
PGSC0003DMT400040184	Potato	plasma membrane	69.97	67.2
Bra031583.1-P	Field mustard	plasma membrane	63.3	66.91
Bra031593.1-P	Field mustard	plasma membrane	69.48	66.79
CDY22720	Canola	peroxisome, plasma membrane	65.55	66.34
CDY35928	Canola	plasma membrane	65.16	63.72
CDY28053	Canola	plasma membrane	68.01	63.69
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	32.09	60.67
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	22.37	58.91
Bra029645.1-P	Field mustard	plasma membrane, plastid	68.99	58.88
GSMUA_Achr1P04000_001	Banana	plasma membrane	52.8	58.29
CDY68458	Canola	cytosol, peroxisome, plasma membrane	36.41	55.71
CDY61305	Canola	cytosol	24.73	51.75
GSMUA_Achr6P23080_001	Banana	plasma membrane	40.43	41.83
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	10.21	32.4
GSMUA_Achr4P32520_001	Banana	plasma membrane	23.85	29.38
GSMUA_Achr7P25650_001	Banana	plasma membrane	20.8	28.65
GSMUA_Achr6P16920_001	Banana	cytosol	21.49	28.44
GSMUA_Achr4P10650_001	Banana	mitochondrion	21.59	27.78
GSMUA_Achr9P17740_001	Banana	plasma membrane	21.3	26.76
GSMUA_Achr4P10940_001	Banana	cytosol	23.26	26.54
GSMUA_AchrUn_...	Banana	plasma membrane	22.37	25.79
GSMUA_Achr5P08080_001	Banana	plasma membrane	21.2	25.5
GSMUA_Achr1P23580_001	Banana	plasma membrane	25.42	24.0
GSMUA_AchrUn_...	Banana	plasma membrane	25.32	22.43
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	24.63	21.81
GSMUA_AchrUn_...	Banana	plasma membrane	10.7	20.64
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	25.22	15.9

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G17740_001	EnsemblPlants:GSMUA_Achr3P17740_001	EnsemblPlants:GSMUA_Achr3T17740_001	InterPro:HAD-like_sf
InterPro:IPR023299	UniProt:M0SFJ0	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF3
InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002950A24	SEG:seg	:	:

Description

Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:GMGC_GENE;Acc:GSMUA_Achr3G17740_001]

Coordinates

chr3:-:19264400..19272989

Molecular Weight (calculated)

110868.0 Da

IEP (calculated)

5.498

GRAVY (calculated)

0.040

Length

1019 amino acids

Sequence
(BLAST)

0001: MGKGGQDERK KGGLDPPTTN FPAWARTVQE CEAEFKVSAE YGLRSDEVLK RREIYGLNEL EKHSGPSIWQ LVLEQFNDTL VRILLVAAVV SFVLAWYDGD
0101: EENNAEKALE ALKEIQSEHA AVRRDGNLIP NLPAKDLLPG DIQASLTGEN AAVNKTNHHV EHEDIDIQGK ECMVFAGTTV VNGSCVCLVT QTGMNTEIGK
0201: IHSQIHEASQ SEDDAPLKKK LNEFGEVLTA IIGVICALVW LINCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI
0301: CSDKTGTLTT NQMSVVRLIY DWPASSMDVN LQMIAKIAAV CNDASITQSG HHFVTSGMPT EAALKLTSNN SLPNYPTAIR LPITSKLKTK KAQLGWQKKD
0401: SHSPAWQETA LELPTQTDGK GTRTIDTCQN TYILTLLGGA EIHFWKRDCT NPNSQGRAVL KEEGECQLEG ISTVFTVLVE KMGLPGGYDP SSLDSAEILR
0501: CCKWWNGIAQ RVATLEFNRT RKSMGVIVKS KSGTNSLLVK GAVENLLERS THIQLLDGSV VLLDDSSKNL IMNALREMST NALRCLGFAY KDDLAEFSAY
0601: DGGDHPAHKL LLDPSNYASI ETGLIFVGLV GLRDPPRKEV YRAIEDCRAA GIRVMVITGD NKETAEAICR DIGAILRQNG ALLFSRAEPG HKQEIVRLLK
0701: EDGEVVAMTG DGVNDAPALK MADIGIAMGI AGTEVAKEAS DMVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE VASIFLTAAL GIPEGLIPVQ
0801: LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGIATVGI FIIWYTHGSF MGIDLSGDGH TLVTYAQLSN WGECSSWDGF
0901: KTGKVKAMTL SLSVLVAIEM FNSLNALSED GSLLSMPPWV NPWLLLAMSV SFGLHFLILY VPFLAQVFGI VPLSFNEWLL VLAVALPVIL IDEVLKFVGR
1001: CTSSSGARRR SASAKHKDE

Best Arabidopsis Sequence Match ( AT1G07810.1 )
(BLAST)

0001: MGKGSEDLVK KESLNSTPVN SDTFPAWAKD VAECEEHFVV SREKGLSSDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPM GRMDANLQMI AKIAAICNDA NVEQSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG DVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGNKL LLVKGAVENV LERSTHIQLL DGSKRELDQY SRDLILQSLR DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLI FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGIEFMDVQ DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DMVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHSSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTLSTKQKE E

Arabidopsis Description

ECA1Calcium-transporting ATPase 1, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:P92939]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.