Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06279 | Canola | plasma membrane | 93.14 | 76.0 |
| Os05t0120700-01 | Rice | plasma membrane | 62.42 | 67.97 |
| CDY70305 | Canola | plasma membrane | 30.72 | 38.21 |
| CDY22720 | Canola | peroxisome, plasma membrane | 94.12 | 28.6 |
| CDY09907 | Canola | plasma membrane | 93.46 | 28.09 |
| CDY06268 | Canola | plasma membrane | 93.46 | 28.04 |
| CDY35928 | Canola | plasma membrane | 92.48 | 27.16 |
| AT1G07810.1 | Thale cress | plasma membrane | 92.16 | 26.58 |
| AT1G07670.2 | Thale cress | plasma membrane | 91.83 | 26.48 |
| CDY28053 | Canola | plasma membrane | 92.16 | 25.92 |
| GSMUA_Achr6P15410_001 | Banana | plasma membrane | 74.84 | 25.59 |
| Zm00001d028687_P001 | Maize | extracellular, mitochondrion | 83.01 | 23.94 |
| Zm00001d047769_P001 | Maize | plasma membrane | 82.35 | 23.73 |
| EER92445 | Sorghum | plasma membrane | 82.03 | 23.66 |
| TraesCS1D01G047900.1 | Wheat | plasma membrane | 80.72 | 23.43 |
| KRG95874 | Soybean | endoplasmic reticulum | 81.05 | 23.4 |
| VIT_06s0004g03900.t01 | Wine grape | plasma membrane | 80.72 | 23.28 |
| PGSC0003DMT400040184 | Potato | plasma membrane | 80.72 | 23.28 |
| TraesCS1B01G060700.1 | Wheat | golgi | 80.39 | 23.27 |
| HORVU1Hr1G007310.1 | Barley | plasma membrane | 79.74 | 23.26 |
| KRH67591 | Soybean | endoplasmic reticulum | 80.39 | 23.21 |
| Solyc11g072880.1.1 | Tomato | nucleus, plastid, unclear | 80.39 | 23.19 |
| TraesCS1A01G047000.1 | Wheat | plasma membrane | 79.74 | 23.08 |
| EES18919 | Sorghum | plasma membrane | 79.74 | 23.06 |
| GSMUA_Achr3P17740_001 | Banana | plasma membrane | 76.8 | 23.06 |
| Zm00001d011013_P001 | Maize | plasma membrane | 78.76 | 22.91 |
| TraesCS4A01G103000.2 | Wheat | unclear | 79.41 | 22.88 |
| TraesCS4B01G201500.2 | Wheat | golgi | 79.41 | 22.88 |
| TraesCS4D01G202200.2 | Wheat | plasma membrane | 79.08 | 22.79 |
| HORVU4Hr1G058210.4 | Barley | plastid | 79.41 | 22.44 |
| GSMUA_Achr2P16100_001 | Banana | plasma membrane | 62.75 | 21.1 |
| GSMUA_Achr10P... | Banana | plasma membrane | 60.78 | 20.85 |
| CDY07153 | Canola | plasma membrane | 69.93 | 20.3 |
| CDY51719 | Canola | plasma membrane | 69.93 | 20.3 |
| CDY65295 | Canola | cytosol | 16.01 | 18.49 |
| CDX94924 | Canola | plasma membrane | 47.71 | 17.61 |
| CDX89371 | Canola | plasma membrane | 17.65 | 16.07 |
| CDY53835 | Canola | nucleus, plasma membrane, plastid | 15.69 | 15.58 |
| CDY22604 | Canola | plasma membrane | 47.71 | 14.63 |
| CDY19574 | Canola | plasma membrane | 26.47 | 13.46 |
| CDX93457 | Canola | cytosol, nucleus, plasma membrane | 47.71 | 12.12 |
| Os03t0281600-01 | Rice | plasma membrane | 29.09 | 10.53 |
| CDY14779 | Canola | plasma membrane | 25.49 | 7.85 |
| CDY40822 | Canola | plasma membrane | 25.16 | 7.58 |
| CDY34219 | Canola | plasma membrane | 25.16 | 7.57 |
| CDX93910 | Canola | plasma membrane | 25.49 | 7.55 |
| CDX82212 | Canola | plasma membrane | 26.8 | 7.52 |
| CDY32412 | Canola | plasma membrane | 26.8 | 7.52 |
| CDY10319 | Canola | plasma membrane | 25.16 | 7.51 |
| CDY10680 | Canola | plasma membrane | 24.84 | 7.5 |
| CDY06915 | Canola | plasma membrane | 25.16 | 7.46 |
| CDY50072 | Canola | plasma membrane | 26.47 | 7.4 |
| CDX76883 | Canola | plasma membrane | 24.51 | 7.4 |
| CDY27537 | Canola | plasma membrane | 26.14 | 7.33 |
| CDX72049 | Canola | plasma membrane | 24.51 | 7.32 |
| CDY06114 | Canola | plasma membrane | 24.51 | 7.32 |
| CDY49443 | Canola | plasma membrane | 24.18 | 7.3 |
| CDY22420 | Canola | plasma membrane | 24.18 | 7.28 |
| CDY44033 | Canola | plasma membrane | 24.18 | 7.26 |
| CDY37311 | Canola | plasma membrane | 25.82 | 7.24 |
| CDX67686 | Canola | cytosol, peroxisome, plasma membrane, plastid | 24.18 | 7.22 |
| CDY33829 | Canola | plasma membrane | 24.18 | 7.22 |
| CDY19575 | Canola | plasma membrane | 25.82 | 7.21 |
| CDY29571 | Canola | plasma membrane | 23.86 | 7.2 |
| CDX72644 | Canola | plasma membrane | 23.86 | 7.2 |
| CDY38264 | Canola | plasma membrane | 25.16 | 7.18 |
| CDY20693 | Canola | cytosol | 24.84 | 7.1 |
| CDX90109 | Canola | plasma membrane | 23.53 | 7.08 |
| CDY11764 | Canola | plasma membrane | 23.2 | 6.98 |
| CDX68595 | Canola | plasma membrane | 23.86 | 6.9 |
| CDY43534 | Canola | cytosol | 23.86 | 6.89 |
| CDY32902 | Canola | plasma membrane | 24.84 | 6.77 |
| CDY30184 | Canola | plasma membrane | 23.2 | 6.69 |
| CDY46716 | Canola | cytosol | 23.2 | 6.62 |
| CDY53981 | Canola | cytosol | 24.84 | 6.56 |
| CDX89375 | Canola | plasma membrane | 20.26 | 6.01 |
| CDY38720 | Canola | plasma membrane | 18.63 | 5.98 |
| CDY38719 | Canola | plasma membrane | 18.63 | 5.96 |
| CDX94389 | Canola | plasma membrane | 19.93 | 5.95 |
| CDX94386 | Canola | cytosol | 19.61 | 5.7 |
| CDX95120 | Canola | mitochondrion | 2.61 | 5.56 |
| CDY61305 | Canola | cytosol | 5.23 | 3.29 |
| CDY65296 | Canola | cytosol | 0.0 | 0.0 |
| CDY68458 | Canola | cytosol, peroxisome, plasma membrane | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.1110.10 | MapMan:35.1 | GO:A0A078E1V1 | InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cation-transptr_C | EnsemblPlants:CDX95122 |
| ProteinID:CDX95122 | ProteinID:CDX95122.1 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00100663001 |
| InterPro:HAD-like_sf | PFAM:PF00689 | PRINTS:PR00119 | PRINTS:PR00120 | PANTHER:PTHR42861 | PANTHER:PTHR42861:SF4 |
| InterPro:P_typ_ATPase | SUPFAM:SSF56784 | SUPFAM:SSF81665 | TIGRFAMs:TIGR01494 | TMHMM:TMhelix | UniParc:UPI0004EE7AC4 |
Description
BnaC05g05490D
Coordinates
chrLK031886:-:1265106..1266339
Molecular Weight (calculated)
33509.9 Da
IEP (calculated)
5.042
GRAVY (calculated)
0.449
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGDGVNDAH ALKLADIGVA MGISGTEVAK EASDMVLADD NFSTIVAAVG EGRSIDNNMK AFIRYMISSN IGEVASIFLT AALGIPEGMI PVQLLDDSLI
101: TPWILFRYMV IGMYVGVFII WYTHSSFMGI DLSQDGHSLV SYSQLANWGQ CSSWEGFKVS PFTAGSQTFS FDSNPCEYFH QGKIKASTLS LSVLVAIEMF
201: NSLNALSEDG SLVTMPPWVN PWLLLAMAVS FGLHFVILYV PFLAQVFGIV PLKLNEWLLV LDVSLPVILI DEVLKFVGRL TSGYCYSTRT SSAKQKTGVR
301: RKRMII
101: TPWILFRYMV IGMYVGVFII WYTHSSFMGI DLSQDGHSLV SYSQLANWGQ CSSWEGFKVS PFTAGSQTFS FDSNPCEYFH QGKIKASTLS LSVLVAIEMF
201: NSLNALSEDG SLVTMPPWVN PWLLLAMAVS FGLHFVILYV PFLAQVFGIV PLKLNEWLLV LDVSLPVILI DEVLKFVGRL TSGYCYSTRT SSAKQKTGVR
301: RKRMII
0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E
Arabidopsis Description
ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.