CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89371	Canola	plasma membrane	30.32	94.94
CDY65296	Canola	cytosol	4.94	78.79
CDY65295	Canola	cytosol	19.77	78.49
CDX94389	Canola	plasma membrane	76.05	78.05
CDX89375	Canola	plasma membrane	75.95	77.5
CDY46716	Canola	cytosol	49.62	48.65
CDY20693	Canola	cytosol	49.43	48.6
CDY38264	Canola	plasma membrane	49.43	48.46
CDX68595	Canola	plasma membrane	48.48	48.2
CDY30184	Canola	plasma membrane	48.57	48.12
CDY43534	Canola	cytosol	48.19	47.83
CDY38719	Canola	plasma membrane	43.35	47.7
CDY19574	Canola	plasma membrane	27.0	47.18
CDY38720	Canola	plasma membrane	42.4	46.8
CDY32902	Canola	plasma membrane	49.33	46.26
CDY37311	Canola	plasma membrane	46.48	44.82
CDY53981	Canola	cytosol	49.33	44.82
CDY27537	Canola	plasma membrane	46.29	44.6
CDY50072	Canola	plasma membrane	46.39	44.57
CDX82212	Canola	plasma membrane	46.1	44.5
CDY32412	Canola	plasma membrane	46.1	44.5
CDY19575	Canola	plasma membrane	46.29	44.47
CDY40822	Canola	plasma membrane	38.88	40.26
CDY34219	Canola	plasma membrane	38.59	39.92
CDY10680	Canola	plasma membrane	37.93	39.35
CDX72644	Canola	plasma membrane	37.64	39.05
CDY49443	Canola	plasma membrane	37.55	38.95
CDY29571	Canola	plasma membrane	37.45	38.86
CDX76883	Canola	plasma membrane	37.36	38.76
CDY10319	Canola	plasma membrane	37.74	38.73
CDY22420	Canola	plasma membrane	37.36	38.68
CDY44033	Canola	plasma membrane	37.45	38.67
CDY11764	Canola	plasma membrane	37.07	38.35
CDX93910	Canola	plasma membrane	37.64	38.33
CDX90109	Canola	plasma membrane	36.88	38.15
CDY14779	Canola	plasma membrane	35.84	37.97
CDY06915	Canola	plasma membrane	36.22	36.92
CDY06114	Canola	plasma membrane	35.74	36.68
CDY33829	Canola	plasma membrane	35.65	36.59
CDX72049	Canola	plasma membrane	35.65	36.59
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	35.55	36.49
CDY53835	Canola	nucleus, plasma membrane, plastid	7.98	27.27
CDX94924	Canola	plasma membrane	17.87	22.68
CDY22604	Canola	plasma membrane	21.2	22.34
CDY06268	Canola	plasma membrane	21.29	21.96
CDY09907	Canola	plasma membrane	20.91	21.61
CDY06279	Canola	plasma membrane	7.7	21.6
CDY07153	Canola	plasma membrane	21.29	21.25
CDY51719	Canola	plasma membrane	21.2	21.16
CDY22720	Canola	peroxisome, plasma membrane	20.06	20.95
CDY68458	Canola	cytosol, peroxisome, plasma membrane	13.02	20.57
CDY35928	Canola	plasma membrane	19.96	20.15
CDY28053	Canola	plasma membrane	20.63	19.94
CDX95122	Canola	cytosol, plasma membrane, vacuole	5.7	19.61
CDY61305	Canola	cytosol	8.65	18.69
CDY70305	Canola	plasma membrane	4.09	17.48
CDX93457	Canola	cytosol, nucleus, plasma membrane	19.87	17.34
CDX95120	Canola	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	GO:A0A078DYT8	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDX94386	ProteinID:CDX94386
ProteinID:CDX94386.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	EnsemblPlantsGene:GSBRNA2T00157509001	InterPro:HAD-like_sf
InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702
PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120	PANTHER:PTHR24093	PANTHER:PTHR24093:SF368	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI0004EEB485	SEG:seg	:	:

Description

BnaC01g17980D

Coordinates

chrLK031881:-:671352..678595

Molecular Weight (calculated)

115923.0 Da

IEP (calculated)

6.466

GRAVY (calculated)

0.152

Length

1052 amino acids

Sequence
(BLAST)

0001: MQSPRRRSVD LEAGFAGDEG VTQEMAVFHD GGVVTESRNP FRRFRSAVLA ITATRRFKIV LDSKKDSERE EVCGSHDHQA TTRAAARLLY QSEEPVQVVG
0101: IEIPDEFGGI KLEEFVSSIS RDDGLRVLKL CDGASCLPYT ISTQLVTGLS RLLLTDLEKG ICGSHEDIQR RRDIFGSNTY PLKKEGNFCM FLGEASRGFT
0201: LIVLVFAAMA SLLLQIKTKT INHGWYEEAG IIITVILVIF VTAISNYNQS LQFEKVNDEK RKICIEVTRD GRRVKVSIYD IVVGDIIPLK SVRYNMLQVP
0301: ADGVLVSGYS LQIGEYETMG TNKTVNKDTD IDPILISGSI VEDGIGTMLV TRVGMNTQWR MPMASIPLYT GRQTPLQVYL NRVVTAFSLI SISVALVVFL
0401: IESCLYFMGR TKNKDGSPMF VAGKTTLDEE IDMVIKFVIL GVTIVVAAVP EGLPLAVTLN IAYMSRKLGG EKALVQKLSA CEAMGSATTI MEVVDVCAGG
0501: VRPQNLDTMS ELSPLQISLI AEGIALNTNG SVYHPEGGSE DSEPEVFGSA TERAILNFGV KLGMNFDEIK SKSTIFRVSP FNSSRKRRGV AVQLHDSQVR
0601: VHWKGAAKAI LASCEGYMAR DNIASMDQEK ISQFENIIDD MCNEGLRCAA LAYRNYPEGD IHRNEAFTNI PESNLVLLAI IGIKDSCRPG IGDSIEQCRN
0701: AGIKVCMVTG DDLLTAKAIA MECGILTATS DINTTILASN FSSMSDAERE EIAENILVMG RSSPEENHLL LKELRKKGHV VAATGKGIRD APSLRQADIS
0801: LAMGIGGTAI AKECSDIIVL DDNFASILTV IQWGRSLYTN IQRFVQFRLT VSASALIICV VVAIHSHEIP LNVAQLLWVN LLIDTFGALA LASEPPIDNL
0901: MRRSPVRKGA PFITKLMWAK FVLQVAYQVT ALLLLNFRGE SILKLENKSV DHAYKVKNTL VFNSFVFCQV FNEFECRTLD QTNMFSGILK NHLFLGTIII
1001: TVILQVIVIE CLGIFISTVR LDWKQWLISI GIGFFSQVAG RFPFQAFPYL RN

Best Arabidopsis Sequence Match ( AT4G29900.1 )
(BLAST)

0001: MSGQFNNSPR GEDKDVEAGT SSFTEYEDSP FDIASTKNAP VERLRRWRQA ALVLNASRRF RYTLDLKREE DKKQMLRKMR AHAQAIRAAH LFKAAASRVT
0101: GIASPLPTPG GGDFGIGQEQ IVSISRDQNI GALQELGGVR GLSDLLKTNL EKGIHGDDDD ILKRKSAFGS NTYPQKKGRS FWRFVWEASQ DLTLIILIVA
0201: AVASLALGIK TEGIEKGWYD GISIAFAVLL VIVVTATSDY RQSLQFQNLN EEKRNIRLEV TRDGRRVEIS IYDIVVGDVI PLNIGDQVPA DGVLVAGHSL
0301: AVDESSMTGE SKIVQKNSTK HPFLMSGCKV ADGNGTMLVT GVGVNTEWGL LMASVSEDNG GETPLQVRLN GVATFIGIVG LTVAGVVLFV LVVRYFTGHT
0401: KNEQGGPQFI GGKTKFEHVL DDLVEIFTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN EMTVVECYAG
0501: LQKMDSPDSS SKLPSAFTSI LVEGIAHNTT GSVFRSESGE IQVSGSPTER AILNWAIKLG MDFDALKSES SAVQFFPFNS EKKRGGVAVK SPDSSVHIHW
0601: KGAAEIVLGS CTHYMDESES FVDMSEDKMG GLKDAIDDMA ARSLRCVAIA FRTFEADKIP TDEEQLSRWE LPEDDLILLA IVGIKDPCRP GVKNSVLLCQ
0701: QAGVKVRMVT GDNIQTAKAI ALECGILASD SDASEPNLIE GKVFRSYSEE ERDRICEEIS VMGRSSPNDK LLLVQSLKRR GHVVAVTGDG TNDAPALHEA
0801: DIGLAMGIQG TEVAKEKSDI IILDDNFESV VKVVRWGRSV YANIQKFIQF QLTVNVAALV INVVAAISAG EVPLTAVQLL WVNLIMDTLG ALALATEPPT
0901: DHLMDRAPVG RREPLITNIM WRNLFIQAMY QVTVLLILNF RGISILHLKS KPNAERVKNT VIFNAFVICQ VFNEFNARKP DEINIFRGVL RNHLFVGIIS
1001: ITIVLQVVIV EFLGTFASTT KLDWEMWLVC IGIGSISWPL AVIGKLIPVP ETPVSQYFRI NRWRRNSSG

Arabidopsis Description

ACA10Calcium-transporting ATPase 10, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SZR1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.