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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10680 Canola plasma membrane 95.22 96.25
CDY40822 Canola plasma membrane 90.24 91.04
CDY34219 Canola plasma membrane 90.24 90.95
AT3G22910.1 Thale cress plasma membrane 86.63 87.32
PGSC0003DMT400062826 Potato plasma membrane 27.12 79.66
PGSC0003DMT400096083 Potato plasma membrane 23.9 78.78
PGSC0003DMT400097702 Potato plasma membrane 24.88 71.43
VIT_05s0020g04380.t01 Wine grape plasma membrane 69.46 70.36
VIT_05s0020g04390.t01 Wine grape plastid 69.27 70.16
KRG93759 Soybean plastid 67.51 67.25
VIT_05s0020g04300.t01 Wine grape plasma membrane 68.59 67.08
VIT_05s0020g04280.t01 Wine grape plastid 68.98 66.14
VIT_05s0020g04240.t01 Wine grape plasma membrane 61.76 66.08
VIT_05s0020g04350.t01 Wine grape plasma membrane 20.1 64.78
VIT_05s0020g04260.t01 Wine grape mitochondrion, plasma membrane 66.44 63.88
CDX93910 Canola plasma membrane 64.2 63.7
VIT_19s0014g01620.t01 Wine grape plasma membrane 35.41 62.91
PGSC0003DMT400096782 Potato plasma membrane 39.51 62.5
PGSC0003DMT400089589 Potato plasma membrane 47.61 62.01
Solyc09g082890.1.1 Tomato peroxisome, plasma membrane 22.44 59.9
VIT_05s0020g04360.t01 Wine grape plasma membrane 42.34 59.86
GSMUA_Achr7P25650_001 Banana plasma membrane 42.83 59.32
PGSC0003DMT400089336 Potato plasma membrane 50.54 57.24
TraesCS1D01G335500.1 Wheat plastid 56.1 56.54
TraesCS1D01G335400.1 Wheat plastid 56.2 56.47
TraesCS1B01G346400.1 Wheat plastid 56.1 56.37
GSMUA_Achr4P10650_001 Banana mitochondrion 43.51 56.31
TraesCSU01G003600.1 Wheat plastid 55.8 56.3
TraesCS1A01G332800.1 Wheat plastid 56.0 56.05
HORVU1Hr1G076950.3 Barley plastid 56.0 55.84
EER91614 Sorghum plasma membrane 54.83 55.53
Zm00001d014166_P001 Maize mitochondrion, plasma membrane 54.73 55.33
Os10t0418100-01 Rice golgi 55.51 54.98
CDY19574 Canola plasma membrane 32.2 54.82
TraesCS1D01G066500.1 Wheat mitochondrion 44.29 53.79
HORVU0Hr1G016220.1 Barley peroxisome, plasma membrane 43.71 51.73
PGSC0003DMT400093936 Potato plasma membrane 61.85 51.42
Zm00001d043925_P001 Maize plasma membrane 30.73 50.16
CDY38264 Canola plasma membrane 52.29 49.95
CDY20693 Canola cytosol 51.9 49.72
CDX68595 Canola plasma membrane 51.32 49.72
CDY46716 Canola cytosol 52.0 49.67
CDY43534 Canola cytosol 51.02 49.34
CDX82212 Canola plasma membrane 52.39 49.27
CDY32412 Canola plasma membrane 52.39 49.27
CDY30184 Canola plasma membrane 51.02 49.25
CDY19575 Canola plasma membrane 52.59 49.22
CDY50072 Canola plasma membrane 52.49 49.13
CDY37311 Canola plasma membrane 52.29 49.13
CDY27537 Canola plasma membrane 52.29 49.08
CDY32902 Canola plasma membrane 52.1 47.59
CDX89371 Canola plasma membrane 15.32 46.73
CDY53981 Canola cytosol 52.29 46.29
CDY65296 Canola cytosol 2.93 45.45
TraesCS4B01G007200.1 Wheat cytosol, peroxisome, plasma membrane 42.54 44.99
CDY11764 Canola plasma membrane 43.71 44.05
CDY49443 Canola plasma membrane 43.41 43.89
CDX76883 Canola plasma membrane 43.41 43.89
CDX90109 Canola plasma membrane 43.41 43.76
CDY22420 Canola plasma membrane 43.32 43.7
CDX72644 Canola plasma membrane 43.22 43.69
CDY29571 Canola plasma membrane 43.12 43.59
CDY44033 Canola plasma membrane 43.12 43.38
CDY65295 Canola cytosol 11.12 43.02
CDY14779 Canola plasma membrane 41.56 42.9
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 42.15 42.15
CDY06114 Canola plasma membrane 42.15 42.15
CDX72049 Canola plasma membrane 42.05 42.05
TraesCS1A01G161100.1 Wheat mitochondrion 30.34 41.97
CDY33829 Canola plasma membrane 41.85 41.85
CDY06915 Canola plasma membrane 41.66 41.38
CDX94389 Canola plasma membrane 38.05 38.05
CDX89375 Canola plasma membrane 38.05 37.83
CDX94386 Canola cytosol 38.73 37.74
CDY38720 Canola plasma membrane 34.44 37.04
VIT_05s0020g04270.t01 Wine grape plasma membrane 63.61 36.49
CDY38719 Canola plasma membrane 32.2 34.52
VIT_05s0020g04220.t01 Wine grape plastid 69.07 34.44
VIT_05s0020g04330.t01 Wine grape mitochondrion, plasma membrane 67.61 33.79
CDY53835 Canola nucleus, plasma membrane, plastid 9.37 31.17
CDY06279 Canola plasma membrane 10.44 28.53
CDX94924 Canola plasma membrane 22.15 27.38
CDY22604 Canola plasma membrane 26.63 27.35
CDY07153 Canola plasma membrane 27.71 26.95
CDY51719 Canola plasma membrane 27.32 26.57
CDY22720 Canola peroxisome, plasma membrane 25.56 26.02
CDY06268 Canola plasma membrane 25.76 25.88
CDY09907 Canola plasma membrane 25.46 25.64
CDX95122 Canola cytosol, plasma membrane, vacuole 7.51 25.16
CDY28053 Canola plasma membrane 26.44 24.91
CDY70305 Canola plasma membrane 5.95 24.8
CDY35928 Canola plasma membrane 24.78 24.38
CDY68458 Canola cytosol, peroxisome, plasma membrane 14.83 22.82
CDY61305 Canola cytosol 10.54 22.18
CDX93457 Canola cytosol, nucleus, plasma membrane 24.59 20.91
CDX95120 Canola mitochondrion 0.1 0.69
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000GO:A0A078FBD7
UniProt:A0A078FBD7InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY10319ProteinID:CDY10319ProteinID:CDY10319.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0070588GO:GO:0099132EnsemblPlantsGene:GSBRNA2T00032181001InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:IPR023299InterPro:P-type_ATPase_IIBPFAM:PF00122PFAM:PF00689PFAM:PF00690
PFAM:PF00702PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR24093PANTHER:PTHR24093:SF414
InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665
TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517TMHMM:TMhelixUniParc:UPI0004EE2284SEG:seg:
Description
BnaC05g29600DCalcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078FBD7]
Coordinates
chrLK032002:-:517924..521001
Molecular Weight (calculated)
113440.0 Da
IEP (calculated)
8.229
GRAVY (calculated)
-0.017
Length
1025 amino acids
Sequence
(BLAST)
0001: MATQVSDHAK KGNSVGVKFL LELPKTLSTS SKKWHQAFIK IYSSRTILNC AKHTIRKPGL FPRSISYTAV DIDHHQGDFT IDKETQGDFT IDKETLNDLV
0101: KNKNQEKLES LGGTDGLVSA LKTNTRLGIN EEADEIQRRR SMFGSNTYTR PPSKSLINFV VKAFKDLTIL ILLGCATLSL GFGIKEHGLK EGWYDGGSIF
0201: VAVFLVVAVS AVSNFRQNRQ FDKLSKVSSN IKIDVVRNGR RQEISIFDIV VGDIVCLNIG DQVPADGVFV EGHSLHVDES SMTGESDQIE VNLNGNTFLF
0301: SGTKIADGFG KMVVTSVGMN TAWGQMMSHI SRDTTEQTPL QTRLNKLTSS IGKVGLLVAF LVLLVLLVRY FTGSTKDESG NREYNGKKTK SDEIVNAVVE
0401: MVAAAVTIIV VAIPEGLPLA VTLTLAYSMK RMMKDQAMVR KLSACETMGS ATTICTDKTG TLTLNQMKVT EFWSGLESRN ASSSLSRTVL ELFHQGVAMN
0501: TTGSVFKADS NSSEYEFSGS PTEKAILSWA VEELKMDMEE VLREHEVLHF EAFNSEKKRS GVLIKKRGEI TVHWKGAAEK ILAMCCTFYD GYGVAKEIQE
0601: DDKVKFEKII QSMAAKSLRC IAFAYSERND NNETKKLKEE NLTLLGIIGI KDPCRPGVKK AVEDCKLAGV NIKMITGDNI FTARAIAVEC GILIPEDETN
0701: EDAVLDGEAF RSYTQQQRLE KVERIKVMAR SSPFDKLLMV KCLKELGHVV AVTGDGTNDA PALKEADIGL SMGIQGTEVA KESSDIVILD DNFASVATVL
0801: KWGRCVYNNI QKFIQFQLTV NVAALVINFV AAVSAGEVPL TAVQLLWVNL IMDTLGALAL ATEKPSNDLM KNKPVGRTGP LITNVMWRNL LAQAVYQIAV
0901: LLVFQFRGKE VFDVTERVKN TLIFNTFVLC QVFNEFNARS LEKKNVFEGL HKNRLFVGII VVTVVLQVVM VEFLKRFADT EMLNWGQWGV CVAIGAASWP
1001: IGWLVKCVPV PEKHFFSYLK WKKRS
Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)
0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS
Arabidopsis Description
ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.