Factsheet for PGSC0003DMT400093936

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062826	Potato	plasma membrane	26.44	93.41
PGSC0003DMT400096083	Potato	plasma membrane	22.47	89.07
PGSC0003DMT400097702	Potato	plasma membrane	25.22	87.11
PGSC0003DMT400096782	Potato	plasma membrane	42.74	81.33
PGSC0003DMT400089589	Potato	plasma membrane	51.58	80.81
PGSC0003DMT400089336	Potato	plasma membrane	55.88	76.13
VIT_05s0020g04390.t01	Wine grape	plastid	55.23	67.29
VIT_05s0020g04380.t01	Wine grape	plasma membrane	54.99	67.0
VIT_05s0020g04240.t01	Wine grape	plasma membrane	51.34	66.08
KRG93759	Soybean	plastid	54.91	65.79
VIT_05s0020g04300.t01	Wine grape	plasma membrane	55.8	65.65
CDY40822	Canola	plasma membrane	53.04	64.37
Bra023790.1-P	Field mustard	plasma membrane	52.64	63.82
CDY34219	Canola	plasma membrane	52.55	63.72
VIT_05s0020g04280.t01	Wine grape	plastid	55.23	63.7
AT3G22910.1	Thale cress	plasma membrane	51.91	62.93
CDY10680	Canola	plasma membrane	51.66	62.82
Bra033900.1-P	Field mustard	plasma membrane	51.34	62.36
VIT_05s0020g04350.t01	Wine grape	plasma membrane	16.06	62.26
CDY10319	Canola	plasma membrane	51.42	61.85
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	53.28	61.63
VIT_19s0014g01620.t01	Wine grape	plasma membrane	28.71	61.35
PGSC0003DMT400050008	Potato	plasma membrane	48.34	59.24
VIT_05s0020g04360.t01	Wine grape	plasma membrane	33.66	57.24
GSMUA_Achr7P25650_001	Banana	plasma membrane	33.82	56.35
GSMUA_Achr4P10650_001	Banana	mitochondrion	35.69	55.56
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	44.44	54.04
HORVU1Hr1G076950.3	Barley	plastid	45.01	53.99
TraesCS1D01G335500.1	Wheat	plastid	44.53	53.98
TraesCSU01G003600.1	Wheat	plastid	44.36	53.84
TraesCS1B01G346400.1	Wheat	plastid	44.53	53.82
EER91614	Sorghum	plasma membrane	44.04	53.66
TraesCS1D01G335400.1	Wheat	plastid	44.36	53.63
TraesCS1A01G332800.1	Wheat	plastid	44.44	53.52
Os10t0418100-01	Rice	golgi	44.12	52.56
TraesCS1D01G066500.1	Wheat	mitochondrion	35.77	52.25
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	34.39	48.96
Zm00001d043925_P001	Maize	plasma membrane	24.25	47.61
PGSC0003DMT400021028	Potato	plasma membrane	34.47	45.21
PGSC0003DMT400094259	Potato	plasma membrane	32.36	44.28
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	34.23	43.55
PGSC0003DMT400048740	Potato	plastid	34.63	41.54
PGSC0003DMT400033064	Potato	plasma membrane	34.87	41.11
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	33.82	41.0
PGSC0003DMT400055386	Potato	plasma membrane	33.58	40.75
PGSC0003DMT400055192	Potato	plasma membrane	33.41	40.51
TraesCS1A01G161100.1	Wheat	mitochondrion	23.2	38.6
VIT_05s0020g04270.t01	Wine grape	plasma membrane	50.61	34.92
VIT_05s0020g04220.t01	Wine grape	plastid	55.96	33.56
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	55.15	33.15
PGSC0003DMT400000352	Potato	peroxisome	21.25	25.0
PGSC0003DMT400040184	Potato	plasma membrane	21.33	24.79

Protein Annotations

Gene3D:1.20.1110.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:IPR023299	UniProt:M1DT14
InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF13246
EnsemblPlantsGene:PGSC0003DMG400043507	PGSC:PGSC0003DMG400043507	EnsemblPlants:PGSC0003DMT400093936	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
PANTHER:PTHR24093	PANTHER:PTHR24093:SF292	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI0002958872
SEG:seg	:	:	:	:	:

Description

Cation-transporting atpase plant [Source:PGSC_GENE;Acc:PGSC0003DMG400043507]

Coordinates

chr9:-:54687820..54691521

Molecular Weight (calculated)

135835.0 Da

IEP (calculated)

6.717

GRAVY (calculated)

-0.043

Length

1233 amino acids

Sequence
(BLAST)

0001: MNNITTDFPA EIESSNKKRW HLAFATIYCS RAFKNKVSPA IVPSYSHGSP AYNPTKVLGD TIAIDVVQDH PFFSGIDHSS LAKLVKDKNT DELADLGGVQ
0101: GVAASLKTDT TNGVSGDPED VARRHEAFGS NMYRKAPAKS FFIFVWESFK YPTIIVLLIW GALSIVLGIK EDGVKEGWCD GGGIYVAVLL FVTVSSTSHF
0201: RQTRQFDKLS KETKIIQVEA VRKGRRQQIS IFEIVVGDVI CLKIGDQVPA DGILVQGHSL QVDESSMTGE SDHVEINISQ NPFLISGTKV VDGYGMMLVT
0301: SVNMNTTWGE MMSEISSGPN EHTPLQERLE KLTSSIDKVG WLVAFLVFVV QLVLYFTGTT KDENGNKKFN RSKTSSGDVI NAVVGIVANA VIIVVVAIPE
0401: GLPLAITLTL AYLMKRMMDD KAIVRKLSAC ETMGSATIIC TDKTGTLTLN KMTVTKFFLG IQHVKAESHT TISAKVLELF HQGVGLNTTG SVFKSSDPSS
0501: NFEFSGSPTE KAILSWAVTE LNMEMDQIKR NFNILHVEAF NSEKKKSGVL IKNNSDGTIH AHWKGAAEMI SRMCSHYYDL EGNVKPLEES DKEECDRIIE
0601: GMAASSLRCI AFAHKQVPKA EQEDHEHMHG NVPDNSIILL GFLGLKDPCR PGMKKAVEDC QNAGVKIKMI TGDNVFTAKA MAEIHTSISA KVLELFHQGV
0701: GLNTTGSVFK SSDPSSNFEF SGSPTEKAIL SWAVTELNME MDQIKRNFNI LHVEAFNSEK KKSGVLIKNN SDGTIHAHWK GAAEMISRMC SHYYDLEGNV
0801: KPLEESDKEE CDRIIEGMAA SSLRCIAFAH KQVPKAEQKD NEHMHGNVPD NSFILLGFVG LKDPCRPGVK KAVEACQSAG VNIKMITGDN VFTAKAIATE
0901: CGILHPNQEV DEGEVIEGEE FRSLTDEERM ERVEKICVMA RSSPFDKLLM VQCLRKKGHV VAVTGDGAND APALKEADIG LSMGIQGTEV AKESSDIVIL
1001: DANFASVVTI LKWGRCFYIN IQKFIQFQLT ANVAALMISF VAAVLSGEEP LTSVQLLWVN LIMDTLGALA LATEKPTEEV MKKKPVGRTA PLITNIMWRN
1101: LMAQASYQIA VLSTLQFKGE SIFGVSKKVN DTLFFNTFVL CQVFNEFNAR NLEEKNVFKG IHKNKLFMAI IGITLVLQVV MVEFLKKFAN TERLNWGQWG
1201: ICIGFAAASW PIGWLVKCIN VPERPIFSYL RLK

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.