Factsheet for VIT_05s0020g04300.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04280.t01	Wine grape	plastid	90.65	88.87
VIT_05s0020g04390.t01	Wine grape	plastid	84.45	87.45
VIT_05s0020g04380.t01	Wine grape	plasma membrane	84.45	87.45
PGSC0003DMT400096083	Potato	plasma membrane	24.62	82.96
PGSC0003DMT400062826	Potato	plasma membrane	27.58	82.81
VIT_05s0020g04240.t01	Wine grape	plasma membrane	73.86	80.79
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	81.11	79.74
VIT_05s0020g04360.t01	Wine grape	plasma membrane	53.63	77.52
VIT_19s0014g01620.t01	Wine grape	plasma membrane	42.37	76.95
KRG93759	Soybean	plastid	73.28	74.64
PGSC0003DMT400097702	Potato	plasma membrane	25.1	73.67
VIT_05s0020g04350.t01	Wine grape	plasma membrane	21.47	70.75
CDY34219	Canola	plasma membrane	68.51	70.6
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	70.71	70.57
CDY40822	Canola	plasma membrane	68.42	70.57
Bra023790.1-P	Field mustard	plasma membrane	68.42	70.5
AT3G22910.1	Thale cress	plasma membrane	67.46	69.52
CDY10680	Canola	plasma membrane	67.18	69.43
Bra033900.1-P	Field mustard	plasma membrane	66.79	68.97
CDY10319	Canola	plasma membrane	67.08	68.59
VIT_14s0030g02110.t01	Wine grape	plasma membrane	64.03	67.85
PGSC0003DMT400096782	Potato	plasma membrane	41.89	67.75
PGSC0003DMT400089589	Potato	plasma membrane	49.71	66.2
VIT_14s0030g02080.t01	Wine grape	plasma membrane	66.32	65.32
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	23.86	65.1
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	62.21	64.75
GSMUA_Achr7P25650_001	Banana	plasma membrane	45.13	63.92
PGSC0003DMT400089336	Potato	plasma membrane	53.63	62.1
GSMUA_Achr4P10650_001	Banana	mitochondrion	45.52	60.23
TraesCSU01G003600.1	Wheat	plastid	55.82	57.58
TraesCS1D01G335400.1	Wheat	plastid	56.01	57.55
TraesCS1D01G335500.1	Wheat	plastid	55.82	57.52
EER91614	Sorghum	plasma membrane	55.53	57.51
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	55.63	57.5
TraesCS1B01G346400.1	Wheat	plastid	55.92	57.45
HORVU1Hr1G076950.3	Barley	plastid	56.11	57.2
TraesCS1A01G332800.1	Wheat	plastid	55.82	57.13
Os10t0418100-01	Rice	golgi	55.82	56.52
PGSC0003DMT400093936	Potato	plasma membrane	65.65	55.8
TraesCS1D01G066500.1	Wheat	mitochondrion	44.47	55.21
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	43.32	52.42
Zm00001d043925_P001	Maize	plasma membrane	30.06	50.16
VIT_11s0052g00320.t01	Wine grape	plasma membrane	51.43	49.91
VIT_09s0018g02130.t01	Wine grape	plasma membrane	51.62	47.67
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	93.13	47.59
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	42.56	46.03
VIT_05s0020g04270.t01	Wine grape	plasma membrane	77.0	45.16
VIT_18s0001g09150.t01	Wine grape	plasma membrane	42.56	43.81
VIT_07s0129g00180.t01	Wine grape	plasma membrane	41.98	43.18
VIT_13s0158g00360.t01	Wine grape	plasma membrane	42.37	42.86
TraesCS1A01G161100.1	Wheat	mitochondrion	30.25	42.78
VIT_05s0020g04220.t01	Wine grape	plastid	83.78	42.7
VIT_08s0007g08960.t01	Wine grape	plasma membrane	41.7	42.3
VIT_07s0129g00110.t01	Wine grape	plasma membrane	20.99	41.12
VIT_00s0691g00010.t01	Wine grape	plasma membrane	30.25	40.69
VIT_00s0463g00030.t01	Wine grape	plasma membrane	34.92	36.02
VIT_06s0004g03900.t01	Wine grape	plasma membrane	27.48	27.14
VIT_08s0040g02830.t01	Wine grape	plasma membrane	26.62	26.25
VIT_18s0001g08850.t01	Wine grape	plasma membrane	23.0	26.0
VIT_15s0046g00040.t01	Wine grape	plasma membrane	26.05	25.98

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100259585	wikigene:100259585	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB50471	ProteinID:CCB50471.1	UniProt:F6HDV0	EMBL:FN595749	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	EntrezGene:LOC100259585	wikigene:LOC100259585	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093
PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000210AA22	ArrayExpress:VIT_05s0020g04300
EnsemblPlantsGene:VIT_05s0020g04300	EnsemblPlants:VIT_05s0020g04300.t01	RefSeq:XP_002279629	RefSeq:XP_002279629.1	SEG:seg	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV0]

Coordinates

chr5:-:6026551..6039177

Molecular Weight (calculated)

115399.0 Da

IEP (calculated)

7.100

GRAVY (calculated)

0.028

Length

1048 amino acids

Sequence
(BLAST)

0001: MDILHSFFLR PSFVPLDFTG KSFAESAVNI SEKTGNCPTQ KSGLMLSEIE SILDVPATLG RHNKRWHLAF ATIYCSRALH SLLNKKKSSK PPVSTHSFVV
0101: LSVEPHLAFP NIDHTSLTAV VKEKNLDQLR KLGGVEGVAD ALKTDTKSGI HGAVEDVAER QETFGSNTYP RPPTKSFFYF VLEAFKDLTI LILLACATLS
0201: LGFGIKEHGP KEGWYDGGSI FVAVFLVISV SAVSNFRQNR QFEKLSKVSN NIEVEVVRGG HRQKISIFDI VVGDVACLKI GDQVPADGLF LAGHSLQVDE
0301: SSMTGESDHV EINSSQNPFL FSGTKVADGY AQMLVTSVGM NTTWGEMMST ISRDNNEQTP LQARLNKLTS SIGKVGLAVA FLVLLVLVVR YFTGNTEDEN
0401: GNQEFNGSKT KADDIVNAMV RIIAAAVTIV VVAIPEGLPL AVTLTLAYSM KRMMADQAMV RKLSACETMG SATTICTDKT GTLTLNQMKV TKYWLGKEPV
0501: EDSSSIATNV LKLIQQGVAL NTTGSIYRAT SKSEFEFSGS PTEKALLSWA VLELDMDMER LKQNYTILHV EAFNSEKKRS GILMRKKADN KIHVHWKGAA
0601: EMILAMCSSY YDASGSMKEL DDGERMTFEQ IIQGMAASSL RCIAFAHKQI PEEEQEIREG RQKLKEDSLT LIGLVGIKDP CRPGVRKAVE DCQYAGVNVK
0701: MITGDNVFTA RAIATECGIL RPDQDINSEA VVEGEVFRKY TSEERMEKVD KICVMARSSP FDKLLMVQCL KQKGHVVAVT GDGTNDAPAL KEADIGLSMG
0801: IQGTEVAKES SDIIILDDNF ASVATVLRWG RCVYDNIQKF IQFQLTVNVA ALVINFVAAV SAGEVPLTAV QLLWVNLIMD TLGALALATE QPTKELMEKP
0901: PVGRKEPLIS NVMWRNLLAQ ALYQIAILLT LQFKGQSIFG VSEKVKDTLI FNTFVLCQVF NEFNARKLEK KNVFKGLHKN KLFLGIIGIT IILQVVMVEF
1001: LKKFADTERL DWGQWGACIG IAAASWPIGW VVKCIPVSDK PFLSYLKW

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.