Factsheet for VIT_00s0463g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0691g00010.t01	Wine grape	plasma membrane	58.76	76.64
VIT_19s0014g01620.t01	Wine grape	plasma membrane	20.87	36.74
VIT_05s0020g04390.t01	Wine grape	plastid	36.42	36.56
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	36.02	36.35
VIT_05s0020g04380.t01	Wine grape	plasma membrane	35.93	36.07
VIT_14s0030g02080.t01	Wine grape	plasma membrane	37.11	35.43
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	36.12	34.95
VIT_05s0020g04300.t01	Wine grape	plasma membrane	36.02	34.92
VIT_05s0020g04350.t01	Wine grape	plasma membrane	10.93	34.91
VIT_14s0030g02110.t01	Wine grape	plasma membrane	33.96	34.88
VIT_05s0020g04280.t01	Wine grape	plastid	36.12	34.33
VIT_05s0020g04240.t01	Wine grape	plasma membrane	32.09	34.03
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	34.94	33.3
VIT_05s0020g04360.t01	Wine grape	plasma membrane	22.05	30.9
VIT_11s0052g00320.t01	Wine grape	plasma membrane	31.89	30.0
KRH14123	Soybean	plasma membrane	30.32	29.93
VIT_09s0018g02130.t01	Wine grape	plasma membrane	32.19	28.81
VIT_18s0001g09150.t01	Wine grape	plasma membrane	28.44	28.39
VIT_13s0158g00360.t01	Wine grape	plasma membrane	28.94	28.38
VIT_08s0007g08960.t01	Wine grape	plasma membrane	28.35	27.88
VIT_07s0129g00180.t01	Wine grape	plasma membrane	27.95	27.87
VIT_07s0129g00110.t01	Wine grape	plasma membrane	14.67	27.85
Solyc07g065300.1.1	Tomato	plasma membrane	22.83	23.82
VIT_08s0040g02830.t01	Wine grape	plasma membrane	19.88	19.0
VIT_05s0020g04270.t01	Wine grape	plasma membrane	33.27	18.91
VIT_06s0004g03900.t01	Wine grape	plasma membrane	19.29	18.47
VIT_18s0001g08850.t01	Wine grape	plasma membrane	16.54	18.12
VIT_15s0046g00040.t01	Wine grape	plasma membrane	18.41	17.79
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	35.63	17.65
VIT_05s0020g04220.t01	Wine grape	plastid	35.14	17.36
TraesCS4D01G079100.1	Wheat	nucleus	0.49	0.76

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100248876	wikigene:100248876	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB57415	ProteinID:CCB57415.1	UniProt:F6HRV7
EMBL:FN596045	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886
GO:GO:0005887	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:IPR023299	EntrezGene:LOC100248876
wikigene:LOC100248876	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PRINTS:PR00119	PANTHER:PTHR24093
PANTHER:PTHR24093:SF363	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01517
TMHMM:TMhelix	UniParc:UPI00021082DF	ArrayExpress:VIT_00s0463g00030	EnsemblPlantsGene:VIT_00s0463g00030	EnsemblPlants:VIT_00s0463g00030.t01	RefSeq:XP_002270864
RefSeq:XP_002270864.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:29716791..29724551

Molecular Weight (calculated)

111629.0 Da

IEP (calculated)

6.160

GRAVY (calculated)

0.013

Length

1016 amino acids

Sequence
(BLAST)

0001: MMMLKLFLSP TTQMSSKSCV SDGDEDLEAQ LSPSTAAGNP CRNRWRSIFL KLQAHQIFIS ILSDPRRSIS LADISSASFY APVRSSDGDD YEDSEPNGTV
0101: GILPPSPQVS LDIPSDAGDV RSSTNANLQH ANIATIVKNK DLDSLIKFGG VPGIAEALHT DLEKGIPGDE QDLHLRRLAS PISKTEPSPT FFQCLLKACN
0201: SYIIFLLLLS MALYLGFGIK KEGLETGWYE GFIILVAIII IVVCHSIRDF WRETQHRSSG KHELSEKMET VVEVLREGSQ KKLSSTSDIV LGDILCIKRG
0301: YLVPADGLLV PGEALELDDQ SESIIHDRNP FMFYGAKVIS GNGRMLVTSV GMNTEWGEMM RKVIQAPNKT PLQAQLDKVN TWTEIFGLLI SILIIVVLFL
0401: RLTLENEDDM PGLPSLKGKP STIKDLMDAV KRIIVKPTGQ LKGYPLVIIV SLAYGNKKAL SGNALVKELS ACAILGSATA ICTDKIGGLT TSTVQVKTCR
0501: IGGEDINGDS VIHPDVIDAL CYGIYALVLD QENPCGLEEE EVVSWAKSRL GMKQDILKQS CTFVGAEELN SNEGGSQVLL RKTRGNETVE CLHWKGPATT
0601: ILTQCSSYYD SEGKKKDMGE KRMDFEKFIQ QMQSKKLKTM AFAYKEINDS SEENSLILIG LLSLRDTDWT ETKEAVQACR NAGVNIKMVS SDNISELRDM
0701: AVQCGMSDPN SLVLDGNAFR NYTEEERMDR VDRISIMGNA LPSDKLLLVE CLKQKGHTVA VIGARTDETP AIRQADVGVT MGTWSTKMAK ETSDIVIFDG
0801: NFSSLVTIMR HGRCAYENVQ KYMQHELTMV IAGLLVTFIT MGHSGDAPIT AIQLAFGSVI VGIPGGLALL TEPPAEKLIG KQPVGQGGTL ITWAMWRNII
0901: TQASYQVAIL VTIQFKGKVI LGISPKVNKS LVFNSFVLCQ VFNLFNCRKM EKKNMFQGIK KNLWFWVAVA AIMGLQAAFI EIEHWVGGSA RLNCAQWGTC
1001: LLIGMVSWVI DYIGKF

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.