Factsheet for VIT_19s0014g01620.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04350.t01	Wine grape	plasma membrane	35.18	63.84
PGSC0003DMT400062826	Potato	plasma membrane	38.3	63.32
PGSC0003DMT400096083	Potato	plasma membrane	33.45	62.06
PGSC0003DMT400097702	Potato	plasma membrane	36.74	59.38
VIT_05s0020g04390.t01	Wine grape	plastid	78.34	44.66
VIT_05s0020g04380.t01	Wine grape	plasma membrane	77.82	44.37
VIT_05s0020g04240.t01	Wine grape	plasma membrane	73.31	44.15
VIT_05s0020g04300.t01	Wine grape	plasma membrane	76.95	42.37
VIT_05s0020g04280.t01	Wine grape	plastid	76.78	41.44
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	74.0	40.06
GSMUA_Achr7P25650_001	Banana	plasma membrane	49.57	38.65
KRG93759	Soybean	plastid	67.42	37.8
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	68.28	37.52
PGSC0003DMT400089589	Potato	plasma membrane	49.74	36.47
CDY40822	Canola	plasma membrane	63.6	36.12
CDY34219	Canola	plasma membrane	63.43	35.99
CDY10680	Canola	plasma membrane	63.08	35.9
Bra023790.1-P	Field mustard	plasma membrane	63.26	35.89
Bra033900.1-P	Field mustard	plasma membrane	63.08	35.86
AT3G22910.1	Thale cress	plasma membrane	63.08	35.79
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	62.05	35.55
CDY10319	Canola	plasma membrane	62.91	35.41
VIT_14s0030g02110.t01	Wine grape	plasma membrane	60.14	35.09
VIT_14s0030g02080.t01	Wine grape	plasma membrane	64.3	34.87
GSMUA_Achr4P10650_001	Banana	mitochondrion	46.1	33.59
VIT_05s0020g04360.t01	Wine grape	plasma membrane	39.69	31.59
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	47.31	31.52
EER91614	Sorghum	plasma membrane	55.11	31.42
TraesCS1B01G346400.1	Wheat	plastid	55.11	31.18
TraesCS1D01G335400.1	Wheat	plastid	55.11	31.18
TraesCSU01G003600.1	Wheat	plastid	54.77	31.1
TraesCS1D01G335500.1	Wheat	plastid	54.77	31.07
TraesCS1A01G332800.1	Wheat	plastid	54.77	30.86
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	54.07	30.77
HORVU1Hr1G076950.3	Barley	plastid	54.59	30.64
Os10t0418100-01	Rice	golgi	53.38	29.76
TraesCS1D01G066500.1	Wheat	mitochondrion	42.98	29.38
PGSC0003DMT400093936	Potato	plasma membrane	61.35	28.71
VIT_11s0052g00320.t01	Wine grape	plasma membrane	53.03	28.33
VIT_00s0691g00010.t01	Wine grape	plasma membrane	37.09	27.47
VIT_09s0018g02130.t01	Wine grape	plasma membrane	52.86	26.87
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	44.89	26.73
PGSC0003DMT400089336	Potato	plasma membrane	40.03	25.52
PGSC0003DMT400096782	Potato	plasma membrane	28.08	25.0
VIT_07s0129g00180.t01	Wine grape	plasma membrane	42.63	24.14
VIT_13s0158g00360.t01	Wine grape	plasma membrane	42.46	23.65
VIT_18s0001g09150.t01	Wine grape	plasma membrane	41.59	23.58
VIT_05s0020g04270.t01	Wine grape	plasma membrane	72.96	23.56
Zm00001d043925_P001	Maize	plasma membrane	25.13	23.09
VIT_08s0007g08960.t01	Wine grape	plasma membrane	41.25	23.04
VIT_05s0020g04220.t01	Wine grape	plastid	76.78	21.55
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	76.08	21.4
VIT_00s0463g00030.t01	Wine grape	plasma membrane	36.74	20.87
TraesCS1A01G161100.1	Wheat	mitochondrion	25.3	19.7
VIT_07s0129g00110.t01	Wine grape	plasma membrane	15.94	17.2
VIT_18s0001g08850.t01	Wine grape	plasma membrane	25.82	16.07
VIT_06s0004g03900.t01	Wine grape	plasma membrane	29.29	15.93
VIT_08s0040g02830.t01	Wine grape	plasma membrane	28.6	15.52
VIT_15s0046g00040.t01	Wine grape	plasma membrane	27.73	15.22
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.20.1110.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cyto_dom_N	ProteinID:CCB46274	ProteinID:CCB46274.1	UniProt:F6H1X8	EMBL:FN595229	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00689	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81660	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI0002109545	ArrayExpress:VIT_19s0014g01620	EnsemblPlantsGene:VIT_19s0014g01620
EnsemblPlants:VIT_19s0014g01620.t01	SEG:seg	:	:	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6H1X8]

Coordinates

chr19:-:1702005..1703823

Molecular Weight (calculated)

63472.6 Da

IEP (calculated)

6.578

GRAVY (calculated)

0.167

Length

577 amino acids

Sequence
(BLAST)

001: MMADQAMVRK LSACETMGSA TTICTDKTGI LTLNQMEVTK FWLGQDPVGV SSSISTNLLN LIHQGVALNT FGSVYRATSG SKFEFSDSPI EKAILSWAVR
101: KLDMDMETTK LSCTILHVEP FNSEKKRSGV SMRSNADNTI HVHWKGAAEM ILAICSSYYD ASGSMKDLDD GERMKFEQII EGMAARSLRC IAFAHKQIPE
201: EDHGIGAGLQ KLKEDNLTLI GLVGIEDPCR PGVREAVETC RCAGVDVKMI TGDNIFIARA IATDCGILRP DQGTTSEVVV EGEVFRKYTP EERMEKVGKI
301: RVMARSSPFD KHLMVQCLKQ KGHVVAVTGD GTYDAPALME ANIGLCMGIQ GTQVAKESSD IIILDDNFDS IARVFMWGRF VHYNVQKFIQ LQLTVTLAAL
401: VINVVAVVSA HEVLFDVLSL LWLTLILDTL CALALATQQP TKDLNEGPPV SQTQPLITNI MWRNILAQAV YQIAVGLTLK FIGESIFHVN EKVKNTLILN
501: ISALCQVFNL VNAKKLEKKN KLFWGITGIA IVLEVVAVEF LKKFGDTKRL SWGQWAACIG VAAVSWPIGF LVEYIPV

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.