Factsheet for VIT_05s0020g04270.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
endoplasmic reticulum 1
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	51.76	86.77
VIT_05s0020g04380.t01	Wine grape	plasma membrane	45.27	79.94
VIT_05s0020g04390.t01	Wine grape	plastid	45.05	79.55
VIT_05s0020g04300.t01	Wine grape	plasma membrane	45.16	77.0
PGSC0003DMT400062826	Potato	plasma membrane	15.0	76.79
PGSC0003DMT400096083	Potato	plasma membrane	13.32	76.53
VIT_05s0020g04280.t01	Wine grape	plastid	45.27	75.68
VIT_05s0020g04240.t01	Wine grape	plasma membrane	39.45	73.59
VIT_19s0014g01620.t01	Wine grape	plasma membrane	23.56	72.96
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	81.03	70.6
VIT_05s0020g04360.t01	Wine grape	plasma membrane	28.6	70.48
KRG93759	Soybean	plastid	39.9	69.29
PGSC0003DMT400097702	Potato	plasma membrane	13.82	69.19
VIT_05s0020g04350.t01	Wine grape	plasma membrane	12.03	67.61
VIT_05s0020g04220.t01	Wine grape	plastid	77.34	67.22
CDY40822	Canola	plasma membrane	37.05	65.16
Bra023790.1-P	Field mustard	plasma membrane	37.05	65.09
CDY34219	Canola	plasma membrane	36.99	65.0
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	38.11	64.86
AT3G22910.1	Thale cress	plasma membrane	36.77	64.6
CDY10680	Canola	plasma membrane	36.6	64.5
Bra033900.1-P	Field mustard	plasma membrane	36.54	64.33
CDY10319	Canola	plasma membrane	36.49	63.61
PGSC0003DMT400089589	Potato	plasma membrane	27.59	62.64
VIT_14s0030g02110.t01	Wine grape	plasma membrane	34.25	61.88
PGSC0003DMT400096782	Potato	plasma membrane	22.38	61.73
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	34.08	60.48
VIT_14s0030g02080.t01	Wine grape	plasma membrane	35.81	60.15
GSMUA_Achr4P10650_001	Banana	mitochondrion	25.13	56.69
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	12.09	56.25
GSMUA_Achr7P25650_001	Banana	plasma membrane	23.28	56.22
PGSC0003DMT400089336	Potato	plasma membrane	28.15	55.58
TraesCS1D01G335500.1	Wheat	plastid	31.06	54.57
TraesCSU01G003600.1	Wheat	plastid	31.0	54.53
TraesCS1B01G346400.1	Wheat	plastid	31.11	54.51
TraesCS1D01G335400.1	Wheat	plastid	31.06	54.41
HORVU1Hr1G076950.3	Barley	plastid	31.23	54.28
TraesCS1A01G332800.1	Wheat	plastid	30.89	53.91
EER91614	Sorghum	plasma membrane	30.39	53.66
Os10t0418100-01	Rice	golgi	31.0	53.53
TraesCS1D01G066500.1	Wheat	mitochondrion	25.24	53.44
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	30.22	53.25
PGSC0003DMT400093936	Potato	plasma membrane	34.92	50.61
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	23.95	49.42
VIT_11s0052g00320.t01	Wine grape	plasma membrane	28.26	46.76
Zm00001d043925_P001	Maize	plasma membrane	16.23	46.18
VIT_09s0018g02130.t01	Wine grape	plasma membrane	28.82	45.37
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	23.84	43.96
VIT_18s0001g09150.t01	Wine grape	plasma membrane	23.34	40.96
VIT_07s0129g00180.t01	Wine grape	plasma membrane	23.06	40.43
VIT_08s0007g08960.t01	Wine grape	plasma membrane	22.94	39.69
VIT_13s0158g00360.t01	Wine grape	plasma membrane	23.0	39.67
VIT_07s0129g00110.t01	Wine grape	plasma membrane	11.81	39.44
TraesCS1A01G161100.1	Wheat	mitochondrion	16.23	39.14
VIT_00s0691g00010.t01	Wine grape	plasma membrane	16.12	36.97
VIT_00s0463g00030.t01	Wine grape	plasma membrane	18.91	33.27
VIT_08s0040g02830.t01	Wine grape	plasma membrane	15.11	25.4
VIT_06s0004g03900.t01	Wine grape	plasma membrane	15.05	25.35
VIT_15s0046g00040.t01	Wine grape	plasma membrane	14.38	24.45
VIT_18s0001g08850.t01	Wine grape	plasma membrane	12.42	23.95

Protein Annotations

Gene3D:1.20.1110.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CCB50469	ProteinID:CCB50469.1
ncoils:Coil	UniProt:F6HDU8	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000210AA20
ArrayExpress:VIT_05s0020g04270	EnsemblPlantsGene:VIT_05s0020g04270	EnsemblPlants:VIT_05s0020g04270.t01	SEG:seg	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDU8]

Coordinates

chr5:-:5964252..5982994

Molecular Weight (calculated)

196286.0 Da

IEP (calculated)

6.339

GRAVY (calculated)

0.032

Length

1787 amino acids

Sequence
(BLAST)

0001: MSNKLDLSSV CMESLLEVPS TLSKPKRRWH LAFATIYCSR ALYSLLNHPV NNKKRSKTLP TSPSSFVILN VKPQHGFSNF DQHSLTQIVK HKSLTQLLEL
0101: GGVEGVAIVL ETDAENGIHG AVEGVTCRRK AFGSNTYQEP PTKSFFYFVV EAFKDVTILI LVACATLSLG FGIKEEGLKE GWYDGGSILV AVFLVISVSA
0201: VSNFRQNRQF DKLSKVSNNI QVDVVRDGRR QQISIFEVVV GDVVCLKIGD QVPADGLFQD GHSLQVDESS MTGESDHVEV DTSLNPFFRD ANEQTPLQAR
0301: LNKLTSSIGK VGLAVAFLVL TVLLVRYFTG STEDENGNQE FKGSLTKADD IVNAVVRIIA AAVTIVVVAI PEGLPLAVTL TLAYSMKRMM ADQAMVRRLS
0401: ACETMGSATT ICTDKTGTLT LNQMKVTKFW LGQDPIQENA SSSIATDVLK LIQQGVALNT TGSIYRATSG SKYEFSGSPT EKAILSWAVL ELNMDMEELK
0501: QTCTILRVEA FNSEKKQSGV ALRNKADNKV HVHWKGAAEM ILEMCSTYYD ASGSMRDLGH VERTTFEQII QGMAASSLRC IAFAHNQLPE EEHEIREATQ
0601: KLKEDSLTLI GLVGIKDPCR PGVRKAVEDC QHAGVNVKMI TGDNIFTARA IATECGILRP DQDMNNEAVV EGEVFWQYTP DERMEKVDKI RVMARSSPFD
0701: KLLMVQCLKQ KGHVVAVTGD GTNDAPALKE ADIGLSMGIQ GTEVAKESSD IIILDDNFAS VATVLRWGRC VYNNIQKFIQ FQLTVNVAAL VINFVAAVSA
0801: GEIPLTAVQL LWVNLIMDTL GALALATEQP TKELMEKPPM GRTEPLISNI MWRNLLAQAL YQIAVLLTLQ FKGESIFGVS KKVKDTLIFN TFVLCQVFNE
0901: FNARELEKKT IFKGLHKNKL FLGIIGITII LQVVMVEFLK KFADTERLDW GQWVMLCCIH LSLPTFPYSC LSLFSPHHRY IPFCLSQSMS NIFHLNLNCK
1001: EPIPDVPTIL SKPNKRWHLA LHPLLNEKRK ESSKLPVTTP SFVALNVKPD AFSSIDQTSL TAIVKEKNLD LLLEFGGVES VADALETDVK NGICGAVHDI
1101: ALRQEVFGSN TYQTAKSLFH FVMEPFKDLT ILILLLCATL SLGSGIKEHG LKEGWYDGGS IFAAVLLIIS VSTLSNFRHN RLLEKLSKVS NNIKVDVVRN
1201: GRRQQISIFE IVVGDVVCLK ISDQVPADGL FLDGHPLQVD ESSMTGESDH VEVNSSQNPF LFSGTKVADG SAQMLVTSVG VNTTCGQMMS TISRDTNDQT
1301: PLQARLKKLT SSTGKVGMAI AFLVLVASLV RYFSGNTEDE NGNQEFIGSN TKAVDMVNSV VRIIAAAVTI VVVAMPEGLS LAVTLILAYS MKRMMADQTM
1401: VRKLSACETM GSVTTICTDK TGTLTLNQMK VIKFCLGQEP IEAFSSISTN LLNLIQQGAA LNTSGSVYRA TSGSKFELSG SPTEKAILSW AVLELDMDME
1501: ILKQTCTILH VEAFKSEKKR SGVSIRSKAD NTIHVHWKGA AEMILAMCSR YYDASGSMKD MDDDERMIFE QIIQGMAASS LRCIAFAHIQ ISEEEHEIGV
1601: GLQKLKEDSL TLIGLVGIKD PCRPGVRKAV EDCQCAGVNV KMITSDNAFT ARAIATECGI LKPDQGMTNE AVVEGEIFRN YTLEERMEKV DKIRVMARSS
1701: PFDKLLMVQC LKQKGHVVAV TGDGTNDAPA LKEAHIGLSM GIQGTEVAKE SSDIIVLDDN FTSVATVLRW GRCKQVVLGD DWDNHYT

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.