CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062826	Potato	plasma membrane	28.96	85.39
PGSC0003DMT400096083	Potato	plasma membrane	24.98	82.64
VIT_05s0020g04390.t01	Wine grape	plastid	75.02	76.28
PGSC0003DMT400097702	Potato	plasma membrane	26.43	76.19
VIT_05s0020g04380.t01	Wine grape	plasma membrane	74.93	76.19
VIT_05s0020g04300.t01	Wine grape	plasma membrane	74.64	73.28
KRH67272	Soybean	peroxisome, plasma membrane	63.56	71.4
VIT_05s0020g04280.t01	Wine grape	plastid	74.05	71.28
VIT_05s0020g04240.t01	Wine grape	plasma membrane	65.89	70.77
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	72.59	70.08
CDY34219	Canola	plasma membrane	68.9	69.71
Bra023790.1-P	Field mustard	plasma membrane	68.9	69.71
CDY40822	Canola	plasma membrane	68.8	69.69
CDY10680	Canola	plasma membrane	67.74	68.74
AT3G22910.1	Thale cress	plasma membrane	67.74	68.53
Bra033900.1-P	Field mustard	plasma membrane	67.44	68.37
CDY10319	Canola	plasma membrane	67.25	67.51
VIT_19s0014g01620.t01	Wine grape	plasma membrane	37.8	67.42
VIT_05s0020g04350.t01	Wine grape	plasma membrane	20.8	67.3
PGSC0003DMT400096782	Potato	plasma membrane	41.3	65.59
KRH41701	Soybean	mitochondrion	62.39	65.11
PGSC0003DMT400089589	Potato	plasma membrane	49.76	65.06
VIT_05s0020g04360.t01	Wine grape	plasma membrane	45.77	64.97
KRG95593	Soybean	plasma membrane	66.57	64.08
KRH29171	Soybean	plasma membrane	58.31	63.09
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	23.03	61.72
GSMUA_Achr7P25650_001	Banana	plasma membrane	44.02	61.22
PGSC0003DMT400089336	Potato	plasma membrane	52.67	59.89
GSMUA_Achr4P10650_001	Banana	mitochondrion	44.8	58.21
KRH47020	Soybean	golgi, plasma membrane	41.5	57.94
TraesCS1D01G335500.1	Wheat	plastid	56.56	57.23
EER91614	Sorghum	plasma membrane	56.27	57.21
TraesCS1D01G335400.1	Wheat	plastid	56.66	57.16
TraesCSU01G003600.1	Wheat	plastid	56.37	57.09
HORVU1Hr1G076950.3	Barley	plastid	56.75	56.81
TraesCS1B01G346400.1	Wheat	plastid	56.27	56.76
TraesCS1A01G332800.1	Wheat	plastid	56.17	56.45
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	55.59	56.41
Os10t0418100-01	Rice	golgi	56.56	56.23
TraesCS1D01G066500.1	Wheat	mitochondrion	45.19	55.09
PGSC0003DMT400093936	Potato	plasma membrane	65.79	54.91
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	44.02	52.31
KRH37353	Soybean	plasma membrane	52.96	50.23
KRH19116	Soybean	cytosol	52.38	50.19
KRH02761	Soybean	cytosol, nucleus, peroxisome	52.48	50.09
KRH12351	Soybean	cytosol, nucleus, peroxisome	52.58	50.0
KRH44631	Soybean	nucleus	52.48	49.45
KRH09610	Soybean	plasma membrane	51.9	48.95
KRH23705	Soybean	nucleus, plastid	51.99	48.5
Zm00001d043925_P001	Maize	plasma membrane	29.54	48.41
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	44.02	46.75
KRH23922	Soybean	plasma membrane	37.71	45.54
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	44.02	44.59
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	43.73	44.38
KRG95209	Soybean	plasma membrane	44.31	44.06
KRH58090	Soybean	cytosol	43.25	43.89
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	43.15	43.79
KRH66886	Soybean	plasma membrane	43.73	43.39
KRH72028	Soybean	cytosol, nucleus, plasma membrane	43.25	43.0
KRH61405	Soybean	endoplasmic reticulum	42.47	42.89
KRH33214	Soybean	endoplasmic reticulum	42.95	42.71
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	42.27	42.69
TraesCS1A01G161100.1	Wheat	mitochondrion	30.71	42.65
KRH39871	Soybean	plasma membrane, plastid	41.98	41.5
VIT_05s0020g04270.t01	Wine grape	plasma membrane	69.29	39.9
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	73.76	37.01
VIT_05s0020g04220.t01	Wine grape	plastid	73.47	36.77
KRH47024	Soybean	cytosol, nucleus, plasma membrane	10.69	31.16
KRH14123	Soybean	plasma membrane	30.71	30.71
KRH67591	Soybean	endoplasmic reticulum	27.31	26.51
KRH61432	Soybean	plasma membrane	25.56	26.27
KRG95874	Soybean	endoplasmic reticulum	27.02	26.23
KRH06423	Soybean	plasma membrane	26.43	25.73
KRH47857	Soybean	plasma membrane	26.82	25.72

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100793918	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02011617	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	EnsemblPlantsGene:GLYMA_19G038600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588
GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1N6I6	InterPro:IPR023214	InterPro:IPR023299
EnsemblPlants:KRG93759	ProteinID:KRG93759	ProteinID:KRG93759.1	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093
PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000233E1C4	SEG:seg

Description

hypothetical protein

Coordinates

chr19:-:5397711..5401554

Molecular Weight (calculated)

113066.0 Da

IEP (calculated)

7.413

GRAVY (calculated)

0.075

Length

1029 amino acids

Sequence
(BLAST)

0001: MSMPLLTNLQ HIETLLNAPN PTVSASIKRW HSAFMAIYCS RAIMSHSTLK KPNKTKAKAS PSPTPTPTPS FTVVDLNPHH SFDIDQTALT DIVKEKELEN
0101: LDRFGGVEGV AKALQTHVEY GIKGGDDDAE DITRRRQVFG SNTYHKPPSK GFFHFVVEAF KDVTILILMV CAALSLGFGI KEHGIKEGWY DGGSIFVAVF
0201: IVISLSAVSN FRQNRQFDKL SQVSNDIQID VVRSGRRQNV SIFEIVVGDV ICLKIGDQVP ADGLFIEGHS LKVDEASMTG ESDHVEISRQ NHPFLFSGTK
0301: VADGYAKMLV TSVGMNTTWG QMMSSISQDI DEETPLQERL NKLTSSIGKV GLAVAFLVLV VLLVRYFTGN TKDETGIKEF NGSRTKFDDI MNAVVGIVAD
0401: AVTIVVVAIP EGLPLAVTLT LAYSMKKMMA DQAMVRKLSA CETMGSATTI CTDKTGTLTL NEMKVTKVWL GLEPVLESAY TKVAPFVLQL IQEGVALNTT
0501: GSVHKSNKSG SEFEFSGSPT EKAILSWAVL ELNMEMENLT RSCSIIHVET FNSKKKRSGV LLRRKVDNTV NAHWKGAAEM VLKMCSRYYD ASGIVKDLDN
0601: DRMLKFEHII QGMASSSLRC IAFAHVEVAE EELVDEEGNA MAKVKENGLT LLGLVGIKDP CRQGVKNAVE ACQNAGVNIK MITGDNVFTA KAIATECGIL
0701: RPNQDTDGAV IEGEEFRNYT HEERLEKVEK ICVMARSSPF DKLLMVQCLK QKGHVVAVTG DGTNDAPALK EADIGLSMGI QGTEVAKESS DIVILDDNFA
0801: SVVTVLRWGR CVYNNIQKFI QFQLTVNVAA LAINFVAAVS AGKVPLTAVQ LLWVNLIMDT LGALALATEK PTMELMHKPP VGRTKPLITN VMWRNLLAQA
0901: LYQIAILLTL QFKGESIFGV TSGVNDTLIF NTFVLCQVFN EFNARKMEKR NVFKGIHRSK LFLGIIGITI ILQVVMVEFL KKFADTERLN WGQWGICIGL
1001: AAVSWPIGWV VKLIPVPDKP FLSFLSKKK

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.