Skip to main content
crop-pal logo
Soybean
Search for another protein from :
Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum

Predictor Summary:
  • cytosol 2
  • endoplasmic reticulum 2
  • plastid 1
  • vacuole 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, plastid, vacuole
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 endoplasmic reticulum: 27224218
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61405 Soybean endoplasmic reticulum 96.76 96.76
PGSC0003DMT400055386 Potato plasma membrane 83.02 83.27
Solyc04g077870.2.1 Tomato plasma membrane 82.92 83.17
VIT_18s0001g09150.t01 Wine grape plasma membrane 82.63 82.71
GSMUA_Achr4P32520_001 Banana plasma membrane 65.85 81.14
Bra010917.1-P Field mustard plasma membrane 80.96 81.12
CDX90109 Canola plasma membrane 80.77 80.92
GSMUA_Achr6P16920_001 Banana cytosol 61.14 80.91
AT1G27770.1 Thale cress plasma membrane 80.96 80.88
GSMUA_Achr4P10940_001 Banana cytosol 70.85 80.85
CDY11764 Canola plasma membrane 80.67 80.83
KRH28359 Soybean cytosol, peroxisome, plasma membrane 79.1 79.33
Os12t0586600-01 Rice plasma membrane 79.2 79.12
KRH77121 Soybean cytosol, endoplasmic reticulum, peroxisome 78.12 78.5
Zm00001d030893_P004 Maize plasma membrane 78.21 78.14
KXG23838 Sorghum plasma membrane 78.21 78.14
KRH58090 Soybean cytosol 77.43 77.81
KRH04436 Soybean cytosol, endoplasmic reticulum, plasma membrane 76.74 77.12
TraesCS5D01G080700.1 Wheat plasma membrane 76.94 76.86
TraesCS5B01G075100.2 Wheat plasma membrane 76.64 76.57
TraesCS5A01G068700.1 Wheat plasma membrane 76.55 76.47
HORVU5Hr1G018160.3 Barley cytosol 75.96 74.93
EER93815 Sorghum plastid 68.5 67.57
Zm00001d033334_P001 Maize plastid 68.4 67.41
Os03t0616400-01 Rice plastid 67.81 66.89
HORVU4Hr1G013660.3 Barley plasma membrane, plastid 68.3 66.29
TraesCS4D01G079200.1 Wheat plasma membrane 68.11 66.1
TraesCS4B01G080300.1 Wheat plastid 68.11 65.97
TraesCS4A01G234700.1 Wheat plastid 67.52 65.4
KRH23922 Soybean plasma membrane 54.17 64.79
KRH33214 Soybean endoplasmic reticulum 63.0 62.03
KRG95209 Soybean plasma membrane 62.9 61.93
KRH66886 Soybean plasma membrane 62.81 61.72
KRH72028 Soybean cytosol, nucleus, plasma membrane 62.61 61.64
KRH39871 Soybean plasma membrane, plastid 62.9 61.58
KRH47020 Soybean golgi, plasma membrane 36.51 50.47
KRH67272 Soybean peroxisome, plasma membrane 41.12 45.74
KRH09610 Soybean plasma membrane 48.48 45.28
KRH44631 Soybean nucleus 48.38 45.15
KRH37353 Soybean plasma membrane 47.79 44.88
KRH12351 Soybean cytosol, nucleus, peroxisome 47.5 44.73
KRH41701 Soybean mitochondrion 43.08 44.52
KRH29171 Soybean plasma membrane 41.51 44.48
KRH02761 Soybean cytosol, nucleus, peroxisome 47.01 44.43
GSMUA_Achr3P30070_001 Banana cytosol, nucleus, plasma membrane 70.27 44.31
KRH19116 Soybean cytosol 46.61 44.23
KRH23705 Soybean nucleus, plastid 47.69 44.06
KRG93759 Soybean plastid 42.69 42.27
KRG95593 Soybean plasma membrane 43.08 41.07
KRH47024 Soybean cytosol, nucleus, plasma membrane 11.38 32.86
KRH67591 Soybean endoplasmic reticulum 28.26 27.17
KRG95874 Soybean endoplasmic reticulum 28.26 27.17
KRH06423 Soybean plasma membrane 27.77 26.77
KRH47857 Soybean plasma membrane 27.87 26.47
KRH61432 Soybean plasma membrane 25.42 25.87
KRH14123 Soybean plasma membrane 24.93 24.68
Protein Annotations
Gene3D:1.20.1110.10Gene3D:1.20.5.170Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000
EMBL:ACUP02003404InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sfInterPro:Ca_ATPase_N_domEnsemblPlantsGene:GLYMA_06G046000GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005886GO:GO:0005887GO:GO:0006810
GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0043231GO:GO:0070588GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sfUniProt:I1K861
InterPro:IPR023214InterPro:IPR023299EnsemblPlants:KRH52089ProteinID:KRH52089ProteinID:KRH52089.1InterPro:P-type_ATPase_IIB
PFAM:PF00122PFAM:PF00689PFAM:PF00690PFAM:PF12515PFAM:PF13246PRINTS:PR00119
PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR24093PANTHER:PTHR24093:SF221InterPro:P_typ_ATPaseSMART:SM00831
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517
TMHMM:TMhelixUniParc:UPI00023C3389SEG:seg:::
Description
hypothetical protein
Coordinates
chr6:+:3487287..3494740
Molecular Weight (calculated)
111441.0 Da
IEP (calculated)
6.131
GRAVY (calculated)
0.159
Length
1019 amino acids
Sequence
(BLAST)
0001: MEIYLSENFG DVKPKNSSEE ALQRWRKACW LVKNHKRRFR FTANLSKRFE AEAIRRSNQE KFRVAVLVSQ AAIQFIHGLN LSSEYTVPEE VKAAGFEICA
0101: DELGSIVEGR DSKKLKSHGG VDAITNKLNT SVDDGISTSE HLVNQRKEIY GVNKFAESPA RGFWVYVWES LQDTTLMILA VCALVSLVVG IIMEGWPKGA
0201: QDGIGIVASI LLVVFVTATS DYRQSLQFKD LDKEKKKITV QVTRNSCRQK LSMYDLLPGD IVHLNIGDQV PADGLFVSGF SVLINESSLT GESEPVNVSE
0301: LNPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVVTFS VLVQGLFSRK LREGSQWMWS GDDAMQIVEF
0401: FAIAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRH LAACETMGSA TTICSDKTGT LTTNHMTVVK AYICGKIKEV NGSKVYSDFS SDIHDSALAI
0501: LLESIFNNTG GEVVKNKDEK IEILGSPTET ALLEFGLSLG GDFHKERQRS KLVKVEPFNS IKKRMGVVLQ LPDGGFRAHC KGASEIILAS CDKVVDSSGE
0601: VVALNEDSIN HLNNMIETFA GEALRTLCLA YLDIHDEFSV GTAIPTRGYT CIGIVGIKDP VRPGVRESVA ICRSAGIAVR MVTGDNINTA KAIARECGIL
0701: TDGIAIEGPE FREKSEEELL DIIPKIQVMA RSSPMDKHTL VKHLRTTFQE VVSVTGDGTN DAPALHEADI GLAMGIAGTE VAKESADVII LDDNFSTIVT
0801: VAKWGRSVYV NIQKFVQFQL TVNVVALIVN FSSACLTGNA PLTAVQLLWV NMIMDTLGAL ALATEPPNEE LMKRPPVGRK GNFISNVMWR NILGQSIYQF
0901: VVIWFLQTRG KVTFHLDGPD SDLILNTLIF NSFVFCQVFN EISSRDMERI NVFEGILKNY VFVAVLTSTV VFQIIIVEFL GTFANTSPLS LKQWFGSVLF
1001: GVLGMPIAAA LKMIPVGSV
Best Arabidopsis Sequence Match ( AT1G27770.4 )
(BLAST)
0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH
Arabidopsis Description
ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.