CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH24413	plasma membrane
KRH29397	plasma membrane
KRH29398	plasma membrane
KRH53813	plasma membrane
KRH64131	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63380.1	KRH24413	AT1G75820.1	22535420
AT3G63380.1	KRH29397	AT1G75820.1	22535420
AT3G63380.1	KRH29398	AT1G75820.1	22535420
AT3G63380.1	KRH53813	AT4G39400.1	22535420
AT3G63380.1	KRH64131	AT4G39400.1	22535420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67272	Soybean	peroxisome, plasma membrane	82.6	96.4
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	69.22	70.48
AT3G63380.1	Thale cress	plasma membrane	65.95	68.25
CDX93910	Canola	plasma membrane	65.39	67.67
KRG93759	Soybean	plastid	64.08	66.57
KRH41701	Soybean	mitochondrion	58.65	63.59
KRH29171	Soybean	plasma membrane	55.66	62.57
GSMUA_Achr7P25650_001	Banana	plasma membrane	42.1	60.81
GSMUA_Achr4P10650_001	Banana	mitochondrion	43.87	59.22
KRH47020	Soybean	golgi, plasma membrane	39.76	57.67
TraesCS1D01G335500.1	Wheat	plastid	54.54	57.33
TraesCS1D01G335400.1	Wheat	plastid	54.54	57.16
EER91614	Sorghum	plasma membrane	53.98	57.02
TraesCSU01G003600.1	Wheat	plastid	54.16	56.99
TraesCS1B01G346400.1	Wheat	plastid	54.35	56.96
HORVU1Hr1G076950.3	Barley	plastid	54.44	56.61
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	53.6	56.51
TraesCS1A01G332800.1	Wheat	plastid	54.07	56.45
Os10t0418100-01	Rice	golgi	53.88	55.65
TraesCS1D01G066500.1	Wheat	mitochondrion	43.87	55.57
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	42.94	53.0
Zm00001d043925_P001	Maize	plasma membrane	29.75	50.64
KRH09610	Soybean	plasma membrane	51.54	50.5
KRH23705	Soybean	nucleus, plastid	51.64	50.05
KRH19116	Soybean	cytosol	50.23	50.0
KRH37353	Soybean	plasma membrane	50.7	49.95
KRH02761	Soybean	cytosol, nucleus, peroxisome	50.33	49.91
KRH44631	Soybean	nucleus	50.89	49.82
KRH12351	Soybean	cytosol, nucleus, peroxisome	50.33	49.72
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	42.38	46.75
KRH23922	Soybean	plasma membrane	36.3	45.54
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	42.56	44.87
KRH58090	Soybean	cytosol	42.47	44.77
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	42.0	44.19
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	41.72	43.98
KRH72028	Soybean	cytosol, nucleus, plasma membrane	41.81	43.19
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	41.07	43.08
KRH61405	Soybean	endoplasmic reticulum	41.07	43.08
KRH66886	Soybean	plasma membrane	41.53	42.82
KRH33214	Soybean	endoplasmic reticulum	41.35	42.71
TraesCS1A01G161100.1	Wheat	mitochondrion	29.56	42.65
KRG95209	Soybean	plasma membrane	41.25	42.61
KRH39871	Soybean	plasma membrane, plastid	40.69	41.79
KRH47024	Soybean	cytosol, nucleus, plasma membrane	11.41	34.56
KRH14123	Soybean	plasma membrane	29.75	30.9
KRH67591	Soybean	endoplasmic reticulum	27.03	27.26
KRH06423	Soybean	plasma membrane	26.94	27.25
KRG95874	Soybean	endoplasmic reticulum	26.94	27.17
KRH61432	Soybean	plasma membrane	25.16	26.87
KRH47857	Soybean	plasma membrane	26.94	26.84

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100790034	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02012120	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_19G159900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1N9K8	InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRG95593
ProteinID:KRG95593	ProteinID:KRG95593.1	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690
PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF292
InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI00023DDE0F	SEG:seg	:

Description

hypothetical protein

Coordinates

chr19:-:42081928..42086294

Molecular Weight (calculated)

118021.0 Da

IEP (calculated)

7.456

GRAVY (calculated)

0.052

Length

1069 amino acids

Sequence
(BLAST)

0001: MSNSQNPKYD DSSFLIDITT TVNYTINTAK KRWRFAYTAI YSRRVMLALA KEVISKRNTN THPYSKLFQS QSSGSGSILD IIEPLIPQHG TNNHYSLVPD
0101: VDKARLASMV KDKNLEAFAE FGGVEGVANI LGTIPAKGIS GSDDDVATRR ELFGSNTYQR PPPKVFLSFV VEAFNDTTIL ILLVCAGLSL GFGIKEHGPG
0201: EGWYEGGSIF VAVFLVVVVT ALSNFRQERQ FDKLSKISNN IKVEVVRNGR PQQISIFEVH VGDIVSLKIG DQIPADGLFL SGYSLLVDES SMTGESDHVE
0301: IEPSNSPFLL SGAKVVDGFA QMLVTSVGTN TAWGEMMSSI SRDTKERTPL QARLDKLTSS IGKVGLAVAF LVLIVLLIRY FTGNTQDDKG NQEFQGSKTD
0401: VNDVFNAVVR IVAAAVTIVV VAIPEGLPLA VTLTLAYSMK RMMADQAMVR KLSACETMGS ATVICTDKTG TLTLNQMRVT KFWLGLENAM ENFSNAMAPK
0501: VLELFHQGVG LNTTGSIYKP SSESEPEISG SPTEKAILLW AASDLGMDMD ELKRTHEVLH VETFNSEKKR SGVAIRKKTN STVHVHWKGA AEIILAMCSN
0601: YIDNNGIEKS LDEDRSKLEK IIQGMAASSL RCIAFAYMHI SEDNDYNDKE KVHQILRKDG LTLLGIVGLK DPCRSDVKKA VETCKLAGVS IKMITGDNIF
0701: TAKAIAAECG ILDLDGHVNA GEVVEGVEFR NYTEEERMEK VEKIRVMARS SPLDKLLMVQ CLKKKGHVVA VTGDGTNDAP ALKEADIGLS MGIQGTEVAK
0801: ESSDIVILDD NFNSVATVLR WGRCVYNNIQ KFIQFQLTVN VAALVINFVA AVSSGDVPLT TVQLLWVNLI MDTLGALALA TERPTKELME KQPVGRTEPL
0901: ITRIMWRNLL AQALYQIAVL LVLQFNGKSI FNVNGKVKDT LIFNTFVLCQ VFNEFNSRSM EKLNVFQGTH KNHLFLGIVG ITLVLQVLMV ELLRKFADTE
1001: RLTWEQWGIC IGIAAVSWPI AWFTKLVPVS DITFFSHHVK WVKVLVFKIK HLFSFYLVTR LKNHKFQAS

Best Arabidopsis Sequence Match ( AT3G63380.1 )
(BLAST)

0001: MRDLKEYDYS ALLLNLTTSS LNKAQRRWRF AYAAIYSMRA MLSLVKEIVP ARIDPKTSDA SLSLSYTALE SGEGAKINSM PLSYVPAIDQ EQLVEIMKGK
0101: DLPGIQALGG VEGVAASLRT NPTKGIHGNE QEVSRRRDLF GSNTYHKPPP KGLLFFVYEA FKDLTILILL VCAIFSLGFG IKEHGIKEGW YEGGSIFVAV
0201: FLVIVVSALS NFRQERQFDK LSKISNNIKV EVLRDSRRQH ISIFDVVVGD VVFLKIGDQI PADGLFLEGH SLQVDESSMT GESDHLEVDH KDNPFLFSGT
0301: KIVDGFAQML VVSVGMSTTW GQTMSSINQD SSERTPLQVR LDTLTSTIGK IGLTVAALVL VVLLVRYFTG NTEKEGKREY NGSKTPVDTV VNSVVRIVAA
0401: AVTIVVVAIP EGLPLAVTLT LAYSMKRMMS DQAMVRKLSA CETMGSATVI CTDKTGTLTL NEMKVTKFWL GQESIHEDST KMISPDVLDL LYQGTGLNTT
0501: GSVCVSDSGS TPEFSGSPTE KALLSWTVLN LGMDMESVKQ KHEVLRVETF SSAKKRSGVL VRRKSDNTVH VHWKGAAEMV LAMCSHYYTS TGSVDLMDST
0601: AKSRIQAIIQ GMAASSLRCI AFAHKIASND SVLEEDGLTL MGIVGLKDPC RPGVSKAVET CKLAGVTIKM ITGDNVFTAK AIAFECGILD HNDKDEEDAV
0701: VEGVQFRNYT DEERMQKVDK IRVMARSSPS DKLLMVKCLR LKGHVVAVTG DGTNDAPALK EADIGLSMGI QGTEVAKESS DIVILDDNFA SVATVLKWGR
0801: CVYNNIQKFI QFQLTVNVAA LVINFIAAIS AGEVPLTAVQ LLWVNLIMDT LGALALATER PTNELLKRKP VGRTEALITN VMWRNLLVQS LYQIAVLLIL
0901: QFKGMSIFSV RKEVKDTLIF NTFVLCQVFN EFNAREMEKK NVFKGLHRNR LFIGIIAITI VLQVIMVEFL KKFADTVRLN GWQWGTCIAL ASLSWPIGFF
1001: TKFIPVSETP FLSYFKNPRS LFKGSRSPSL KKP

Arabidopsis Description

ACA12Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VEV7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.