CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 3
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH24625
KRH26664
KRH29625

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G37640.1	KRH24625	AT4G03290.1	21798944
AT4G37640.1	KRH29625	AT4G03290.1	21798944
AT4G37640.1	KRH22653	AT5G22290.1	21798944
AT4G37640.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	97.63	97.63
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	84.22	84.06
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	83.92	83.92
VIT_07s0129g00180.t01	Wine grape	plasma membrane	82.25	81.84
Bra017841.1-P	Field mustard	plasma membrane	81.66	81.66
CDX72644	Canola	plasma membrane	81.66	81.66
CDY29571	Canola	plasma membrane	81.56	81.56
PGSC0003DMT400055192	Potato	plasma membrane	81.56	81.32
AT4G37640.1	Thale cress	plasma membrane	81.07	81.07
Solyc02g092450.2.1	Tomato	nucleus, unclear	81.26	81.02
GSMUA_Achr4P10940_001	Banana	cytosol	71.3	80.96
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	81.16	80.92
CDY44033	Canola	plasma membrane	81.26	80.86
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	80.87	80.79
CDY22420	Canola	plasma membrane	80.87	80.71
Solyc02g064680.2.1	Tomato	nucleus, unclear	80.57	80.33
VIT_07s0129g00110.t01	Wine grape	plasma membrane	42.31	80.19
Bra039940.1-P	Field mustard	plasma membrane	80.18	80.18
CDY49443	Canola	plasma membrane	80.08	80.08
CDX76883	Canola	plasma membrane	79.98	79.98
GSMUA_Achr4P32520_001	Banana	plasma membrane	65.09	79.81
Bra010605.1-P	Field mustard	plasma membrane	80.97	79.71
GSMUA_Achr6P16920_001	Banana	cytosol	59.76	78.7
Os12t0586600-01	Rice	plasma membrane	78.01	77.55
KRH61405	Soybean	endoplasmic reticulum	77.91	77.53
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	77.81	77.43
Zm00001d030893_P004	Maize	plasma membrane	76.82	76.37
TraesCS5D01G080700.1	Wheat	plasma membrane	76.53	76.08
TraesCS5A01G068700.1	Wheat	plasma membrane	76.43	75.98
KXG23838	Sorghum	plasma membrane	76.33	75.88
TraesCS5B01G075100.2	Wheat	plasma membrane	76.23	75.78
HORVU5Hr1G018160.3	Barley	cytosol	75.54	74.15
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	68.44	66.1
EER93815	Sorghum	plastid	67.26	66.02
TraesCS4D01G079200.1	Wheat	plasma membrane	67.95	65.62
Os03t0616400-01	Rice	plastid	66.67	65.44
TraesCS4A01G234700.1	Wheat	plastid	67.65	65.21
TraesCS4B01G080300.1	Wheat	plastid	67.55	65.11
Zm00001d033334_P001	Maize	plastid	66.27	64.99
KRH23922	Soybean	plasma membrane	54.44	64.79
KRG95209	Soybean	plasma membrane	62.43	61.16
KRH33214	Soybean	endoplasmic reticulum	62.33	61.06
KRH39871	Soybean	plasma membrane, plastid	62.43	60.81
KRH72028	Soybean	cytosol, nucleus, plasma membrane	61.74	60.48
KRH66886	Soybean	plasma membrane	61.64	60.27
KRH47020	Soybean	golgi, plasma membrane	37.18	51.15
KRH67272	Soybean	peroxisome, plasma membrane	42.8	47.38
KRH44631	Soybean	nucleus	49.01	45.51
KRH09610	Soybean	plasma membrane	48.42	45.0
KRH37353	Soybean	plasma membrane	48.13	44.98
KRH12351	Soybean	cytosol, nucleus, peroxisome	47.93	44.92
KRH02761	Soybean	cytosol, nucleus, peroxisome	47.63	44.81
KRH19116	Soybean	cytosol	46.94	44.32
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	70.61	44.31
KRH23705	Soybean	nucleus, plastid	48.03	44.15
KRH41701	Soybean	mitochondrion	42.41	43.61
KRH29171	Soybean	plasma membrane	40.83	43.53
KRG93759	Soybean	plastid	43.89	43.25
KRG95593	Soybean	plasma membrane	44.77	42.47
KRH47024	Soybean	cytosol, nucleus, plasma membrane	11.54	33.14
KRH67591	Soybean	endoplasmic reticulum	28.8	27.55
KRG95874	Soybean	endoplasmic reticulum	28.8	27.55
KRH06423	Soybean	plasma membrane	28.11	26.96
KRH61432	Soybean	plasma membrane	26.53	26.87
KRH47857	Soybean	plasma membrane	28.21	26.65
KRH14123	Soybean	plasma membrane	25.15	24.78

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100776926	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02003199	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:Ca_ATPase_N_dom	EnsemblPlantsGene:GLYMA_05G105200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1K2D4
InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH58090	ProteinID:KRH58090	ProteinID:KRH58090.1	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF12515	PFAM:PF13246	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF262	InterPro:P_typ_ATPase	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix
UniParc:UPI000233A3F0	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:27933311..27937831

Molecular Weight (calculated)

110823.0 Da

IEP (calculated)

5.646

GRAVY (calculated)

0.168

Length

1014 amino acids

Sequence
(BLAST)

0001: MESYLHENFG GVKSKNTTEE ALQKWRKVCG VVKNPKRRFR FTANISKRSE AAAMRRTNQE KLRVAVLVSK AAFQFIQGVQ PSDYVVPDEV KAAGFQICAE
0101: ELGSIVEGHD VKKLKFHGGV DGIAGKLSTS TTTGLSGDSE SRHRRQELFG VNKFTESEVR SFWIFVYEAL QDMTLMILGV CAFVSLIVGI ATEGWPKGAH
0201: DGLGIVASIL LVVFVTATSD YRQSLQFKDL DKEKKKISIQ VTRNGYRQKM SIYSLLPGDI VHLSIGDQVP ADGLFVSGFS VLIDESSLTG ESEPVMVTSQ
0301: NPFLLSGTKV QDGSCTMLIT TVGMRTQWGK LMATLSEGGD DETPLQVKLN GVATIIGKIG LVFAVITFAV LVKGLMGRKL QEGRFWWWSA DDAMEMLEFF
0401: AIAVTIVVVA VPEGLPLAVT LSLAFAMKKM MNDKALVRHL AACETMGSAT TICSDKTGTL TTNRMTVVKT CIFMNIKEVT SNDSSLSTEL PDSALKMLLQ
0501: SIFNNTGGEV VVNKKGKREI LGTPTESALL EFGLSLGGDF HAERQTCKVV KVEPFNSERK RMGVVLEIPD GGLRAHCKGA SEIILAACDK VMNSNGDVVS
0601: IDEESSNYLN STIDQFASEA LRTLCLAYME LENGFSAEDP IPVSGYTCVG IVGIKDPVRP SVKESVEVCR SAGIVVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPDFR EKTQEELFEL IPKIQVMARS SPLDKHTLVK HLRTTFGEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALLVNFS SACMTGSAPL TAVQLLWVNM IMDTLGALAL ATEPPTDDLM KRTPVGRKGE FISNVMWRNI LGQALYQFVV
0901: IWFLQSVGKW VFFLRGPDAE VVLNTLIFNT FVFCQVFNEV NSREMEEVDV FKGIWDNHVF IAVLSATVFF QILIVEYLGT FANTTPLSLV QWIFCLGAGY
1001: VGMPLAVRLK QIPV

Best Arabidopsis Sequence Match ( AT4G37640.1 )
(BLAST)

0001: MESYLNENFD VKAKHSSEEV LEKWRNLCGV VKNPKRRFRF TANLSKRYEA AAMRRTNQEK LRIAVLVSKA AFQFISGVSP SDYTVPEDVK AAGFEICADE
0101: LGSIVESHDV KKLKFHGGVD GLAGKLKASP TDGLSTEAAQ LSQRQELFGI NKFAESEMRG FWVFVWEALQ DMTLMILGVC AFVSLIVGIA TEGWPKGSHD
0201: GLGIAASILL VVFVTATSDY RQSLQFRDLD KEKKKITVQV TRNGFRQKLS IYDLLPGDIV HLAIGDQVPA DGLFLSGFSV VIDESSLTGE SEPVMVNAQN
0301: PFLMSGTKVQ DGSCKMMITT VGMRTQWGKL MATLTEGGDD ETPLQVKLNG VATIIGKIGL FFAVVTFAVL VQGMFMRKLS TGTHWVWSGD EALELLEYFA
0401: IAVTIVVVAV PEGLPLAVTL SLAFAMKKMM NDKALVRHLA ACETMGSATT ICSDKTGTLT TNHMTVVKSC ICMNVQDVAN KGSSLQSEIP ESAVKLLIQS
0501: IFNNTGGEVV VNKHGKTELL GTPTETAILE LGLSLGGKFQ EERKSYKVIK VEPFNSTKKR MGVVIELPEG GRMRAHTKGA SEIVLAACDK VVNSSGEVVP
0601: LDEESIKYLN VTINEFANEA LRTLCLAYMD IEGGFSPDDA IPASGFTCVG IVGIKDPVRP GVKESVELCR RAGITVRMVT GDNINTAKAI ARECGILTDD
0701: GIAIEGPVFR EKNQEELLEL IPKIQVMARS SPMDKHTLVK QLRTTFDEVV AVTGDGTNDA PALHEADIGL AMGIAGTEVA KESADVIILD DNFSTIVTVA
0801: KWGRSVYINI QKFVQFQLTV NVVALVVNFS SACLTGSAPL TAVQLLWVNM IMDTLGALAL ATEPPNDELM KRLPVGRRGN FITNAMWRNI LGQAVYQFIV
0901: IWILQAKGKA MFGLDGPDST LMLNTLIFNC FVFCQVFNEI SSREMEEIDV FKGILDNYVF VVVIGATVFF QIIIIEFLGT FASTTPLTIT QWIFSIFIGF
1001: LGMPIAAGLK TIPV

Arabidopsis Description

ACA2Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178V2M5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.