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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 2
  • endoplasmic reticulum 2
  • plastid 1
  • vacuole 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid, vacuole
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:cytosol
Plant-mPloc:endoplasmic reticulum, plastid, vacuole
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH52089 Soybean endoplasmic reticulum, mitochondrion 96.76 96.76
PGSC0003DMT400055386 Potato plasma membrane 83.02 83.27
VIT_18s0001g09150.t01 Wine grape plasma membrane 83.12 83.2
Solyc04g077870.2.1 Tomato plasma membrane 82.83 83.07
Bra010917.1-P Field mustard plasma membrane 81.35 81.51
AT1G27770.1 Thale cress plasma membrane 81.45 81.37
CDX90109 Canola plasma membrane 81.16 81.32
CDY11764 Canola plasma membrane 81.06 81.22
GSMUA_Achr4P10940_001 Banana cytosol 70.95 80.96
GSMUA_Achr6P16920_001 Banana cytosol 61.14 80.91
GSMUA_Achr4P32520_001 Banana plasma membrane 65.36 80.53
KRH28359 Soybean cytosol, peroxisome, plasma membrane 79.98 80.22
KRH77121 Soybean cytosol, endoplasmic reticulum, peroxisome 78.8 79.19
Os12t0586600-01 Rice plasma membrane 78.9 78.82
Zm00001d030893_P004 Maize plasma membrane 78.21 78.14
KXG23838 Sorghum plasma membrane 78.21 78.14
KRH58090 Soybean cytosol 77.53 77.91
KRH04436 Soybean cytosol, endoplasmic reticulum, plasma membrane 76.74 77.12
TraesCS5D01G080700.1 Wheat plasma membrane 76.94 76.86
TraesCS5B01G075100.2 Wheat plasma membrane 76.64 76.57
TraesCS5A01G068700.1 Wheat plasma membrane 76.55 76.47
HORVU5Hr1G018160.3 Barley cytosol 75.96 74.93
EER93815 Sorghum plastid 68.4 67.47
Zm00001d033334_P001 Maize plastid 68.01 67.02
Os03t0616400-01 Rice plastid 67.91 66.99
HORVU4Hr1G013660.3 Barley plasma membrane, plastid 68.79 66.76
TraesCS4D01G079200.1 Wheat plasma membrane 68.3 66.29
TraesCS4B01G080300.1 Wheat plastid 68.3 66.16
TraesCS4A01G234700.1 Wheat plastid 67.81 65.68
KRH23922 Soybean plasma membrane 54.37 65.02
KRG95209 Soybean plasma membrane 63.1 62.13
KRH33214 Soybean endoplasmic reticulum 63.1 62.13
KRH39871 Soybean plasma membrane, plastid 63.4 62.06
KRH66886 Soybean plasma membrane 62.9 61.81
KRH72028 Soybean cytosol, nucleus, plasma membrane 62.71 61.74
KRH47020 Soybean golgi, plasma membrane 36.41 50.34
KRH67272 Soybean peroxisome, plasma membrane 41.12 45.74
KRH09610 Soybean plasma membrane 48.68 45.46
KRH37353 Soybean plasma membrane 48.18 45.25
KRH44631 Soybean nucleus 48.48 45.24
KRH12351 Soybean cytosol, nucleus, peroxisome 47.89 45.1
KRH02761 Soybean cytosol, nucleus, peroxisome 47.5 44.9
KRH19116 Soybean cytosol 47.3 44.88
GSMUA_Achr3P30070_001 Banana cytosol, nucleus, plasma membrane 70.36 44.37
KRH41701 Soybean mitochondrion 42.89 44.32
KRH29171 Soybean plasma membrane 41.31 44.27
KRH23705 Soybean nucleus, plastid 47.79 44.15
KRG93759 Soybean plastid 42.89 42.47
KRG95593 Soybean plasma membrane 43.08 41.07
KRH47024 Soybean cytosol, nucleus, plasma membrane 11.68 33.71
KRH67591 Soybean endoplasmic reticulum 28.07 26.98
KRG95874 Soybean endoplasmic reticulum 28.07 26.98
KRH06423 Soybean plasma membrane 27.48 26.49
KRH47857 Soybean plasma membrane 27.58 26.19
KRH61432 Soybean plasma membrane 25.42 25.87
KRH14123 Soybean plasma membrane 24.63 24.39
Protein Annotations
Gene3D:1.20.1110.10Gene3D:1.20.5.170EntrezGene:100810758Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10
Gene3D:3.40.50.1000EMBL:ACUP02002162InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfInterPro:Ca_ATPase_N_domncoils:CoilEnsemblPlantsGene:GLYMA_04G045400GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005515
GO:GO:0005516GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005886
GO:GO:0005887GO:GO:0006810GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0043231GO:GO:0070588GO:GO:0099132InterPro:HAD-like_sf
InterPro:HAD_sfUniProt:I1JTQ7InterPro:IPR023214InterPro:IPR023299EnsemblPlants:KRH61405ProteinID:KRH61405
ProteinID:KRH61405.1InterPro:P-type_ATPase_IIBPFAM:PF00122PFAM:PF00689PFAM:PF00690PFAM:PF12515
PFAM:PF13246PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR24093PANTHER:PTHR24093:SF221
InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665
TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517TMHMM:TMhelixUniParc:UPI00023393ABSEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:3622849..3633180
Molecular Weight (calculated)
111262.0 Da
IEP (calculated)
6.195
GRAVY (calculated)
0.181
Length
1019 amino acids
Sequence
(BLAST)
0001: MESYLSENFG DVKPKNSSEE ALQRWRKACW LVKNHKRRFR FTANLSKRFE AEAIRRSNQE KFRVAVLVSQ AALQFIHGLN LSTEYTVPEE VKTAGFEICA
0101: DELGSIVEGR DLKKLKSHGG VDAITSKLNT SVDDGISTSQ HLLNQRKEIY GVNKFAESPA RGFWVFVWEA LQDTTLMILA VCALVSLVVG IIMEGWPKGA
0201: QDGIGIVASI LLVVFVTATS DYRQSLQFKD LDKEKKKITV QVTRNSCRQK LSIYDLLPGD IVHLNIGDQV PADGFFVSGF SVLINESSLT GESEPVNVSE
0301: LNPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVVTFS VLVQGLFSRK LREGSQWTWS GDDAMQIVEF
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRH LAACETMGSA TTICSDKTGT LTTNHMTVVK VCICGKIKEV NGSKVSSDFS SDIHDSALAV
0501: LLESIFNNTG GEVVKNKDEK IEILGSPTET ALLELGLSLG GDFLKERQRS KLVKVEPFNS TKKRMGVVLQ LPDGGFRAHC KGASEIILAA CDKVVDSSGE
0601: VVPLNEDSIN HLNNMIETFA GEALRTLCLA YLDIDDEFSV GTPIPTRGYT FIAIVGIKDP VRPGVRESVA ICRSAGIAVR MVTGDNINTA KAIARECGIL
0701: TDGIAIEGPE FREKSEVELL DIIPKIQVMA RSSPMDKHTL VKHLRTTFQE VVSVTGDGTN DAPALHEADI GLAMGIAGTE VAKESADVII LDDNFSTIVT
0801: VAKWGRSVYI NIQKFVQFQL TVNVVALIVN FSSACLTGNA PLTAVQLLWV NMIMDTLGAL ALATEPPNDE LMKRPPVGRK GNFISNVMWR NILGQSIYQF
0901: VVIWFLQTRG KVTFHLDGPD SDLILNTLIF NSFVFCQVFN EISSRDMERV NVFQGILKNY VFVAVLTCTV VFQIIIVEFL GTFANTSPLS LKQWFGSVLF
1001: GVLGMPIAAA LKMIPVGSV
Best Arabidopsis Sequence Match ( AT1G27770.4 )
(BLAST)
0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH
Arabidopsis Description
ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.