Factsheet for GSMUA_Achr6P16920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
endoplasmic reticulum 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10940_001	Banana	cytosol	82.6	71.22
GSMUA_Achr4P32520_001	Banana	plasma membrane	74.55	69.41
VIT_07s0129g00110.t01	Wine grape	plasma membrane	45.06	64.86
VIT_07s0129g00180.t01	Wine grape	plasma membrane	82.34	62.22
Solyc04g077870.2.1	Tomato	plasma membrane	81.69	61.91
PGSC0003DMT400055386	Potato	plasma membrane	81.43	61.71
VIT_18s0001g09150.t01	Wine grape	plasma membrane	81.3	61.49
CDX72644	Canola	plasma membrane	80.91	61.44
Bra017841.1-P	Field mustard	plasma membrane	80.91	61.44
CDY29571	Canola	plasma membrane	80.91	61.44
KRH28359	Soybean	cytosol, peroxisome, plasma membrane	81.04	61.42
AT4G37640.1	Thale cress	plasma membrane	80.78	61.34
KRH77121	Soybean	cytosol, endoplasmic reticulum, peroxisome	80.52	61.14
KRH61405	Soybean	endoplasmic reticulum	80.91	61.14
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	80.91	61.14
CDY22420	Canola	plasma membrane	80.52	61.02
CDY44033	Canola	plasma membrane	80.65	60.94
AT2G22950.1	Thale cress	cytosol, peroxisome, plasma membrane	80.26	60.89
CDY49443	Canola	plasma membrane	80.0	60.75
Bra039940.1-P	Field mustard	plasma membrane	80.0	60.75
Bra010917.1-P	Field mustard	plasma membrane	80.0	60.57
CDX76883	Canola	plasma membrane	79.74	60.55
AT1G27770.1	Thale cress	plasma membrane	80.0	60.39
CDX90109	Canola	plasma membrane	79.74	60.37
CDY11764	Canola	plasma membrane	79.74	60.37
Bra010605.1-P	Field mustard	plasma membrane	80.39	60.1
PGSC0003DMT400033890	Potato	cytosol, peroxisome, plasma membrane	78.96	59.78
KRH58090	Soybean	cytosol	78.7	59.76
Solyc02g064680.2.1	Tomato	nucleus, unclear	78.83	59.69
PGSC0003DMT400055192	Potato	plasma membrane	78.31	59.29
KRH04436	Soybean	cytosol, endoplasmic reticulum, plasma membrane	78.05	59.27
Solyc02g092450.2.1	Tomato	nucleus, unclear	78.18	59.19
GSMUA_Achr9P17740_001	Banana	plasma membrane	57.66	54.75
GSMUA_Achr5P08080_001	Banana	plasma membrane	59.09	53.72
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	20.65	49.53
GSMUA_AchrUn_...	Banana	plasma membrane	45.58	39.71
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	80.0	38.12
GSMUA_Achr1P23580_001	Banana	plasma membrane	51.69	36.89
GSMUA_Achr7P25650_001	Banana	plasma membrane	34.81	36.22
GSMUA_Achr4P10650_001	Banana	mitochondrion	36.1	35.1
GSMUA_AchrUn_...	Banana	plasma membrane	50.78	34.0
GSMUA_AchrUn_...	Banana	plasma membrane	21.56	31.44
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	46.75	31.28
GSMUA_Achr2P16100_001	Banana	plasma membrane	29.48	24.95
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	16.88	24.12
GSMUA_Achr6P15410_001	Banana	plasma membrane	27.79	23.91
GSMUA_Achr10P...	Banana	plasma membrane	26.75	23.09
GSMUA_Achr1P04000_001	Banana	plasma membrane	26.23	21.89
GSMUA_Achr3P17740_001	Banana	plasma membrane	28.44	21.49
GSMUA_Achr6P23080_001	Banana	plasma membrane	25.97	20.3
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	9.35	18.6

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:1.20.5.170	MapMan:24.1.2.2.2	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:Ca_ATPase_N_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524
GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr6G16920_001	EnsemblPlants:GSMUA_Achr6P16920_001
EnsemblPlants:GSMUA_Achr6T16920_001	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0T7P0	InterPro:P-type_ATPase_IIB
PFAM:PF00122	PFAM:PF00689	PFAM:PF00702	PFAM:PF12515	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF221	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000294E252	SEG:seg

Description

Calcium-transporting ATPase 1, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr6G16920_001]

Coordinates

chr6:-:11295441..11300893

Molecular Weight (calculated)

84131.7 Da

IEP (calculated)

6.925

GRAVY (calculated)

0.203

Length

770 amino acids

Sequence
(BLAST)

001: MESYLNQNFG GVKPKHSSEE ALQRWRKLCG VVKNPKRRFR FTANLSKRSE ASAMRKSNQE KLRVAVLVSK AALQFVHGVT LPSEYSVPEE VKAAGFRIYT
101: TLIILAVCAF VSLIVGVSAE GWPKGSHDGL GIAASILLVV FVTATSDYRQ SLQFKDLDKE KKKISVQVTR DGFRQKISIY DILPGDIVHL AIGDQVRDGS
201: CKMLVTTVGM RTQWGKLMAT LGEGGDDETP LQVKLNGGLI RHKIQDGLYL SWSIDDALEL LDYFAIAVTI VVVAVPEGLP LAVTLSLAFA MKKMMNDKAL
301: VRHLAACETM GSATSICSDK TGTLTTNHMT ILLEAIFNNT SGEAVRQETN LVKVEPFNSV KKRMGVVLQL PGGGYRAHCK GASEIILAAC SNQIPVDGYT
401: CIGIVGIKDP VRPGVKESVA VCRSAGITVR MVTGDNINTA KAIARECGIL TDDGVAIEGP DFRKKSLEEM NRLIPKLQVM ARSSPLDKYT LVKHLQTMFK
501: EVVAVTGDGT NDAPALHEAD IGLAMGIAGT EVAKESADVI ILDDNFSTIA IVAKWGRSVY INIQKFVQFQ LTVNVVALVV NFSSACLTGH APLTAVQLLW
601: VNMIMDTLGA LALATEPPND ELMKQAPVGR EDNFISNAMW RNIFGQAFYQ FIVIWYLQTE GKELFQLVGP DSDLTLNTLI FNSFVFCQVF NEISSREIEN
701: IDVLHGILEN YIFVSVITCT VIFQFIIVQF LGDFADTTPL TLSEWVVSAL IGFLGMPIAA AIKMNPVDSK

Best Arabidopsis Sequence Match ( AT1G27770.4 )
(BLAST)

0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH

Arabidopsis Description

ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.