Factsheet for GSMUA_Achr7P25650_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 5
golgi 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P05250_001	plasma membrane
GSMUA_Achr3P26680_001	plasma membrane
GSMUA_Achr4P08920_001	plasma membrane
GSMUA_Achr6P35950_001	plasma membrane
GSMUA_Achr9P24170_001	plasma membrane
GSMUA_AchrUn_...	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G63380.1	GSMUA_Achr3P26680_001	AT1G75820.1	22535420
AT3G63380.1	GSMUA_Achr9P24170_001	AT1G75820.1	22535420
AT3G63380.1	GSMUA_Achr1P05250_001	AT4G39400.1	22535420
AT3G63380.1	GSMUA_Achr4P08920_001	AT4G39400.1	22535420
AT3G63380.1	GSMUA_Achr6P35950_001	AT4G39400.1	22535420
AT3G63380.1	GSMUA_AchrUn_...	AT4G39400.1	22535420

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P10650_001	Banana	mitochondrion	72.57	67.8
PGSC0003DMT400096083	Potato	plasma membrane	23.65	56.27
PGSC0003DMT400062826	Potato	plasma membrane	25.95	55.01
Solyc01g097400.1.1	Tomato	cytosol	19.86	53.45
PGSC0003DMT400097702	Potato	plasma membrane	24.19	50.14
VIT_19s0014g01620.t01	Wine grape	plasma membrane	38.65	49.57
TraesCS1D01G066500.1	Wheat	mitochondrion	54.86	48.1
VIT_05s0020g04390.t01	Wine grape	plastid	63.78	46.64
KRH67272	Soybean	peroxisome, plasma membrane	57.43	46.4
VIT_05s0020g04350.t01	Wine grape	plasma membrane	19.86	46.23
GSMUA_AchrUn_...	Banana	mitochondrion, plasma membrane	20.0	46.11
VIT_05s0020g04380.t01	Wine grape	plasma membrane	62.97	46.05
TraesCS1D01G335500.1	Wheat	plastid	63.24	46.02
HORVU1Hr1G076950.3	Barley	plastid	63.92	46.01
TraesCS1B01G346400.1	Wheat	plastid	63.38	45.98
TraesCS1D01G335400.1	Wheat	plastid	63.38	45.98
TraesCSU01G003600.1	Wheat	plastid	62.97	45.87
TraesCS1A01G332800.1	Wheat	plastid	63.11	45.61
EER91614	Sorghum	plasma membrane	62.3	45.55
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	61.89	45.17
VIT_05s0020g04300.t01	Wine grape	plasma membrane	63.92	45.13
Os10t0418100-01	Rice	golgi	62.84	44.93
KRH41701	Soybean	mitochondrion	59.05	44.32
VIT_05s0020g04280.t01	Wine grape	plastid	63.78	44.15
KRG93759	Soybean	plastid	61.22	44.02
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	62.16	43.81
VIT_05s0020g04240.t01	Wine grape	plasma membrane	56.62	43.74
Bra023790.1-P	Field mustard	plasma membrane	60.0	43.66
CDY40822	Canola	plasma membrane	59.86	43.6
CDY34219	Canola	plasma membrane	59.86	43.56
CDY10680	Canola	plasma membrane	59.32	43.29
Bra033900.1-P	Field mustard	plasma membrane	59.19	43.15
VIT_14s0030g02080.t01	Wine grape	plasma membrane	61.89	43.05
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	58.38	42.9
CDY10319	Canola	plasma membrane	59.32	42.83
AT3G22910.1	Thale cress	plasma membrane	58.78	42.77
CDX93910	Canola	plasma membrane	59.32	42.5
AT3G63380.1	Thale cress	plasma membrane	59.05	42.3
VIT_14s0030g02110.t01	Wine grape	plasma membrane	56.49	42.26
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	60.81	42.21
KRH29171	Soybean	plasma membrane	54.19	42.17
KRG95593	Soybean	plasma membrane	60.81	42.1
PGSC0003DMT400050008	Potato	plasma membrane	55.95	41.15
PGSC0003DMT400089589	Potato	plasma membrane	43.24	40.66
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	46.89	40.07
PGSC0003DMT400096782	Potato	plasma membrane	33.38	38.12
VIT_05s0020g04360.t01	Wine grape	plasma membrane	37.03	37.79
GSMUA_AchrUn_...	Banana	plasma membrane	43.92	36.76
Zm00001d043925_P001	Maize	plasma membrane	31.08	36.62
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	46.89	35.81
GSMUA_Achr4P32520_001	Banana	plasma membrane	39.46	35.31
GSMUA_Achr4P10940_001	Banana	cytosol	42.16	34.94
PGSC0003DMT400089336	Potato	plasma membrane	42.7	34.92
GSMUA_Achr6P16920_001	Banana	cytosol	36.22	34.81
GSMUA_Achr5P08080_001	Banana	plasma membrane	39.46	34.47
PGSC0003DMT400093936	Potato	plasma membrane	56.35	33.82
GSMUA_Achr9P17740_001	Banana	plasma membrane	36.76	33.54
GSMUA_Achr1P23580_001	Banana	plasma membrane	48.65	33.36
GSMUA_AchrUn_...	Banana	plasma membrane	48.24	31.04
PGSC0003DMT400094259	Potato	plasma membrane	36.62	30.08
TraesCS1A01G161100.1	Wheat	mitochondrion	29.59	29.55
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	44.46	28.58
PGSC0003DMT400048740	Potato	plastid	39.05	28.11
GSMUA_AchrUn_...	Banana	plasma membrane	19.19	26.89
Solyc09g082870.1.1	Tomato	plasma membrane	38.38	26.35
GSMUA_Achr6P15410_001	Banana	plasma membrane	28.51	23.58
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	12.16	23.44
GSMUA_Achr2P16100_001	Banana	plasma membrane	28.65	23.3
VIT_05s0020g04270.t01	Wine grape	plasma membrane	56.22	23.28
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	63.38	22.87
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	16.49	22.63
VIT_05s0020g04220.t01	Wine grape	plastid	62.43	22.47
GSMUA_Achr10P...	Banana	plasma membrane	26.76	22.2
GSMUA_Achr1P04000_001	Banana	plasma membrane	26.62	21.34
GSMUA_Achr3P17740_001	Banana	plasma membrane	28.65	20.8
GSMUA_Achr6P23080_001	Banana	plasma membrane	26.62	20.0
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	43.11	19.74
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	9.05	17.31

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	MapMan:35.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0070588	GO:GO:0099132	EnsemblPlantsGene:GSMUA_Achr7G25650_001	EnsemblPlants:GSMUA_Achr7P25650_001	EnsemblPlants:GSMUA_Achr7T25650_001	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:M0TKQ1	InterPro:P-type_ATPase_IIB	PFAM:PF00122
PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00121	ScanProsite:PS00154
PANTHER:PTHR24093	PANTHER:PTHR24093:SF292	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81660	SUPFAM:SSF81665
SignalP:SignalP-noTM	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	UniParc:UPI000296F642	SEG:seg

Description

Putative calcium-transporting ATPase 13, plasma membrane-type [Source:GMGC_GENE;Acc:GSMUA_Achr7G25650_001]

Coordinates

chr7:+:27224286..27229609

Molecular Weight (calculated)

80723.3 Da

IEP (calculated)

6.339

GRAVY (calculated)

0.187

Length

740 amino acids

Sequence
(BLAST)

001: MNPLLFLRWR VAFAMICSCR AIYSLAKKQF ASVLRSPSFV VLEVSADDDA DHRSKPSFSH VETDSLKSLV KERRLEDLRR LGGAAGLVEE IYSNVAAGII
101: GSGNDLRARR EAFGSNSYPR PKPKGFFRFL YEALNDFFLL ILMGCAINPF LTSGVKVIDG YASMLVTGVG MDTTWGEMMS TITRETSEAT PLQERLDKLT
201: SSIGKIGIVV AVLVFAATAS NVISAIVSIF QDAVTIIVVA IPEGLPLAVT LTLAFSMKRM MKDNAMVRML SACETMGSVT TICTDKTGTL TLNQMKVTKF
301: WIGNEEGVGL NTTGSVYRAN ATAEPEISGS PTEKALLSWA VLDLGMDMGE MRRKCSVIHV EAFNSEKKRS GVLVQEEGSR ATITHWKGAA EMILIRCSHY
401: FDRNGSVRDI DAESRMKFEE VIRGMASSKE TPRLDDDGLT LLGLVGLKDP CRPEVESAIG ACRRAGVAVK MITGDNVFTA RAIAVECGII GADDSVMARS
501: SPFDKLLMVQ CLKEKGHVVA VTGDGTNDAP ALKEADVGLS MGVQGTEVAK ESSDIVILDD NFSTVVTVMR WGRCVYNNIQ KFLQFQLTVN IAALVVNFVS
601: AISTGEVPLT TVQLLWVNLI MDTMGALALA TDKPTKDEEV NNTLIFNTFV LCQVFNEFNS RKLEKKNVKF ADTVRLDWGQ WGICLGIAAF SWPIGWLVKC
701: IPVSDTPFLE LVIHHIRASR IPSSIGISEC VLSLSMFIGC

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.