Factsheet for VIT_05s0020g04390.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g04380.t01	Wine grape	plasma membrane	94.66	94.66
VIT_05s0020g04360.t01	Wine grape	plasma membrane	60.87	84.97
VIT_05s0020g04300.t01	Wine grape	plasma membrane	87.45	84.45
PGSC0003DMT400062826	Potato	plasma membrane	28.46	82.52
PGSC0003DMT400096083	Potato	plasma membrane	25.3	82.32
VIT_05s0020g04280.t01	Wine grape	plastid	86.86	82.23
VIT_05s0020g04240.t01	Wine grape	plasma membrane	75.4	79.65
VIT_05s0020g04260.t01	Wine grape	mitochondrion, plasma membrane	83.4	79.17
VIT_19s0014g01620.t01	Wine grape	plasma membrane	44.66	78.34
PGSC0003DMT400097702	Potato	plasma membrane	26.68	75.63
KRG93759	Soybean	plastid	76.28	75.02
VIT_05s0020g04350.t01	Wine grape	plasma membrane	22.53	71.7
VIT_00s0179g00260.t01	Wine grape	plasma membrane, plastid	74.31	71.62
CDY40822	Canola	plasma membrane	71.44	71.16
CDY34219	Canola	plasma membrane	71.44	71.09
Bra023790.1-P	Field mustard	plasma membrane	71.34	70.99
CDY10680	Canola	plasma membrane	70.75	70.61
Bra033900.1-P	Field mustard	plasma membrane	70.55	70.34
AT3G22910.1	Thale cress	plasma membrane	69.96	69.62
CDY10319	Canola	plasma membrane	70.16	69.27
VIT_14s0030g02110.t01	Wine grape	plasma membrane	66.01	67.54
PGSC0003DMT400096782	Potato	plasma membrane	43.08	67.28
PGSC0003DMT400089589	Potato	plasma membrane	51.09	65.69
VIT_14s0030g02080.t01	Wine grape	plasma membrane	68.97	65.6
VIT_14s0030g02090.t01	Wine grape	mitochondrion, plasma membrane	64.72	65.04
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	24.51	64.58
GSMUA_Achr7P25650_001	Banana	plasma membrane	46.64	63.78
PGSC0003DMT400089336	Potato	plasma membrane	54.94	61.44
GSMUA_Achr4P10650_001	Banana	mitochondrion	47.04	60.1
TraesCS1D01G335400.1	Wheat	plastid	58.4	57.94
TraesCSU01G003600.1	Wheat	plastid	58.0	57.78
TraesCS1B01G346400.1	Wheat	plastid	58.2	57.75
TraesCS1D01G335500.1	Wheat	plastid	58.0	57.72
HORVU1Hr1G076950.3	Barley	plastid	58.4	57.49
EER91614	Sorghum	plasma membrane	57.41	57.41
TraesCS1A01G332800.1	Wheat	plastid	58.0	57.32
Zm00001d014166_P001	Maize	mitochondrion, plasma membrane	57.02	56.9
Os10t0418100-01	Rice	golgi	57.71	56.43
PGSC0003DMT400093936	Potato	plasma membrane	67.29	55.23
TraesCS1D01G066500.1	Wheat	mitochondrion	45.95	55.09
HORVU0Hr1G016220.1	Barley	peroxisome, plasma membrane	44.66	52.19
VIT_11s0052g00320.t01	Wine grape	plasma membrane	53.75	50.37
Zm00001d043925_P001	Maize	plasma membrane	30.63	49.36
VIT_09s0018g02130.t01	Wine grape	plasma membrane	53.75	47.93
TraesCS4B01G007200.1	Wheat	cytosol, peroxisome, plasma membrane	44.07	46.03
VIT_05s0020g04270.t01	Wine grape	plasma membrane	79.55	45.05
VIT_13s0158g00360.t01	Wine grape	plasma membrane	44.07	43.05
VIT_07s0129g00180.t01	Wine grape	plasma membrane	43.18	42.89
VIT_08s0007g08960.t01	Wine grape	plasma membrane	43.68	42.79
VIT_18s0001g09150.t01	Wine grape	plasma membrane	42.98	42.73
VIT_05s0020g04220.t01	Wine grape	plastid	86.56	42.61
TraesCS1A01G161100.1	Wheat	mitochondrion	31.03	42.38
VIT_05s0020g04330.t01	Wine grape	mitochondrion, plasma membrane	85.87	42.37
VIT_00s0691g00010.t01	Wine grape	plasma membrane	31.52	40.95
VIT_07s0129g00110.t01	Wine grape	plasma membrane	21.44	40.56
VIT_00s0463g00030.t01	Wine grape	plasma membrane	36.56	36.42
VIT_06s0004g03900.t01	Wine grape	plasma membrane	28.06	26.77
VIT_18s0001g08850.t01	Wine grape	plasma membrane	24.21	26.43
VIT_15s0046g00040.t01	Wine grape	plasma membrane	27.27	26.26
VIT_08s0040g02830.t01	Wine grape	plasma membrane	27.47	26.15

Protein Annotations

Gene3D:1.20.1110.10	EntrezGene:100254571	wikigene:100254571	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	EMBL:AM484192	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN81891	ProteinID:CAN81891.1	ProteinID:CCB50477	ProteinID:CCB50477.1
UniProt:F6HDV6	EMBL:FN595749	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811	GO:GO:0006816	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132
InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100254571	wikigene:LOC100254571
InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF414	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517
TMHMM:TMhelix	UniParc:UPI0001983557	ArrayExpress:VIT_05s0020g04390	EnsemblPlantsGene:VIT_05s0020g04390	EnsemblPlants:VIT_05s0020g04390.t01	RefSeq:XP_002279888
RefSeq:XP_002279888.1	SEG:seg	:	:	:	:

Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F6HDV6]

Coordinates

chr5:-:6153306..6156571

Molecular Weight (calculated)

110789.0 Da

IEP (calculated)

7.310

GRAVY (calculated)

0.099

Length

1012 amino acids

Sequence
(BLAST)

0001: MSNILHVNLN CITPILDLPT TLSKPNKRWH SAFATIYCFR ALHSLLNKKK NSSKVPISTP SFVVLNVKPD AFSSIDQTTL NAIVKGKNLN LLLESGGVEG
0101: VADALETDIK NGISGAVDDV ALRQEAFGSN TYKRPPAKSL FHFVVEAFKD VTILILLFCA ALSLGFGIKE HGLKEGWYDG GSIFVAVILV ISVSAVSNFR
0201: QNRQFEKLSK VSNNIKVDVF RNGRRQQISI FEIVVGDVVS LKIGDQVPAD GLFLDGHSLQ VDESSMTGES DHVEVNSSHN PFLFSGTKVA DGYAQMLVTS
0301: VGMNTTWGQM MSTISRDTNE QTPLQARLNK LTSSIGKAGL AVAFLVLVVL LVRYFTGNTE DENGNQEFNG SKTKADDIVN AVVAIIAAAV TIVVVAIPEG
0401: LPLAVTLTLA YSMKRMMADQ AMVRKLSACE TMGSATTICT DKTGTLTMNQ MKVTKIWLGQ EPIEVSSSIS TNLLNLIQQG VALNTTGSVY KASSGSSKFE
0501: FSGSPTEKAI LSWAVLELDM DMEILKQNCT ILHVEAFNSE KKRSGVLVRS KADDTINVHW KGAAEMILAM CSSYYDASGS TKDMDDGERM TFEQIIQGMA
0601: ASSLRCIAFA HKQIPEEKHE IREATQKLKE DGLTLIGLVG IKDPCRPGVR KAVEDCQYAG VNVKMITGDN VFTARAIATE CGILRPDQGI DNEAVVEGEV
0701: FRKYTPEERM EKVDKIRVMA RSSPFDKLLM VQCLKQKGHV VAVTGDGTND APALKEADIG LSMGIQGTEV AKQSSDIIIL DDNFASVATV LRWGRCVYNN
0801: IQKFIQFQLT VNVAALVINF VAAVSAGEVP LTAVQLLWVN LIMDTLGALA LSTEQPTKGL MDRPPVGRTE PLITNIMWRN LLAQALYQIA VLLTLQFKGE
0901: SIFGVNEKVK DTLIFNTFVL CQVFNEFNAR KLEKKNVFEG IHKNKLFLGI IGITIILQVV MVEFLKKFAD TERLNWGQWG ACLGIAAVSW PLGWVVKCIH
1001: VSNKPFLSYL KW

Best Arabidopsis Sequence Match ( AT3G22910.1 )
(BLAST)

0001: MRRNVSDHAE KKDKVGVEVL LELPKTLSKS NKKWQLALIK LYCSRTLLNC AKHAIRKPGL FPRSLSYTAI DLDHHHGDDH FKIDTETLND LVKNKNQEKL
0101: ESLGGPNGLV SALKSNTRLG INEEGDEIQR RRSTFGSNTY TRQPSKGLFH FVVEAFKDLT ILILLGCATL SLGFGIKEHG LKEGWYDGGS IFVAVFLVVA
0201: VSAVSNFRQN RQFDKLSKVS SNIKIDVVRN GRRQEISIFD IVVGDIVCLN IGDQVPADGV FVEGHLLHVD ESSMTGESDH VEVSLTGNTF LFSGTKIADG
0301: FGKMAVTSVG MNTAWGQMMS HISRDTNEQT PLQSRLDKLT SSIGKVGLLV AFLVLLVLLI RYFTGTTKDE SGNREYNGKT TKSDEIVNAV VKMVAAAVTI
0401: IVVAIPEGLP LAVTLTLAYS MKRMMKDNAM VRKLSACETM GSATVICTDK TGTLTLNQMK VTDFWFGLES GKASSVSQRV VELFHQGVAM NTTGSVFKAK
0501: AGTEYEFSGS PTEKAILSWA VEELEMGMEK VIEEHDVVHV EGFNSEKKRS GVLMKKKGVN TENNVVHWKG AAEKILAMCS TFCDGSGVVR EMKEDDKIQF
0601: EKIIQSMAAK SLRCIAFAYS EDNEDNKKLK EEKLSLLGII GIKDPCRPGV KKAVEDCQFA GVNIKMITGD NIFTARAIAV ECGILTPEDE MNSEAVLEGE
0701: KFRNYTQEER LEKVERIKVM ARSSPFDKLL MVKCLKELGH VVAVTGDGTN DAPALKEADI GLSMGIQGTE VAKESSDIVI LDDNFASVAT VLKWGRCVYN
0801: NIQKFIQFQL TVNVAALVIN FVAAVSAGDV PLTAVQLLWV NLIMDTLGAL ALATEKPTND LMKKKPIGRV APLITNIMWR NLLAQAFYQI SVLLVLQFRG
0901: RSIFNVTEKV KNTLIFNTFV LCQVFNEFNA RSLEKKNVFK GLHKNRLFIG IIVVTVVLQV VMVEFLKRFA DTERLNLGQW GVCIAIAAAS WPIGWLVKSV
1001: PVPERHFFSY LKWKKRS

Arabidopsis Description

ACA13Putative calcium-transporting ATPase 13, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LIK7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.