Factsheet for Solyc04g077870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
endoplasmic reticulum 2
plastid 1
vacuole 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055386	Potato	plasma membrane	98.62	98.62
KRH52089	Soybean	endoplasmic reticulum, mitochondrion	83.17	82.92
KRH61405	Soybean	endoplasmic reticulum	83.07	82.83
GSMUA_Achr4P32520_001	Banana	plasma membrane	67.03	82.35
VIT_18s0001g09150.t01	Wine grape	plasma membrane	82.19	82.02
GSMUA_Achr6P16920_001	Banana	cytosol	61.91	81.69
GSMUA_Achr4P10940_001	Banana	cytosol	71.75	81.63
CDX90109	Canola	plasma membrane	80.51	80.43
Bra010917.1-P	Field mustard	plasma membrane	80.41	80.33
CDY11764	Canola	plasma membrane	80.31	80.24
AT1G27770.1	Thale cress	plasma membrane	80.02	79.71
Os12t0586600-01	Rice	plasma membrane	78.84	78.53
Solyc02g092450.2.1	Tomato	nucleus, unclear	77.66	77.58
Zm00001d030893_P004	Maize	plasma membrane	77.85	77.55
Solyc02g064680.2.1	Tomato	nucleus, unclear	77.36	77.29
KXG23838	Sorghum	plasma membrane	77.46	77.16
TraesCS5D01G080700.1	Wheat	plasma membrane	77.46	77.16
TraesCS5B01G075100.2	Wheat	plasma membrane	77.36	77.06
TraesCS5A01G068700.1	Wheat	plasma membrane	77.36	77.06
HORVU5Hr1G018160.3	Barley	cytosol	76.77	75.51
Os03t0616400-01	Rice	plastid	68.21	67.09
EER93815	Sorghum	plastid	67.72	66.6
HORVU4Hr1G013660.3	Barley	plasma membrane, plastid	68.21	66.0
Zm00001d033334_P001	Maize	plastid	66.93	65.76
TraesCS4D01G079200.1	Wheat	plasma membrane	67.62	65.43
TraesCS4B01G080300.1	Wheat	plastid	67.32	65.02
TraesCS4A01G234700.1	Wheat	plastid	67.13	64.83
Solyc10g079300.1.1	Tomato	plasma membrane	56.4	61.02
Solyc04g016260.2.1	Tomato	unclear	62.11	60.5
Solyc01g097400.1.1	Tomato	cytosol	15.45	57.09
Solyc03g123890.2.1	Tomato	plasma membrane	47.93	46.51
Solyc07g008320.2.1	Tomato	nucleus	49.31	46.35
GSMUA_Achr3P30070_001	Banana	cytosol, nucleus, plasma membrane	71.56	44.99
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	12.7	33.59
Solyc09g082870.1.1	Tomato	plasma membrane	29.72	28.01
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	28.74	27.52
Solyc01g096190.2.1	Tomato	plasma membrane	28.25	27.39
Solyc07g065300.1.1	Tomato	plasma membrane	25.59	26.69
Solyc07g022780.2.1	Tomato	mitochondrion	9.55	26.5
Solyc07g022790.2.1	Tomato	plasma membrane	10.24	26.26

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	InterPro:Ca_ATPase_N_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388	GO:GO:0005488
GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0006811
GO:GO:0006816	GO:GO:0008150	GO:GO:0009536	GO:GO:0009706	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0043231	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	UniProt:K4BUM4	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF08282	PFAM:PF12515	PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR24093	PANTHER:PTHR24093:SF221	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc04g077870.2	EnsemblPlants:Solyc04g077870.2.1	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517
TMHMM:TMhelix	UniParc:UPI000276684E	SEG:seg	:	:	:

Description

Calcium-transporting ATPase 1, chloroplastic [Source:Projected from Arabidopsis thaliana (AT1G27770) UniProtKB/Swiss-Prot;Acc:Q37145]

Coordinates

chr4:+:62755589..62762555

Molecular Weight (calculated)

110756.0 Da

IEP (calculated)

5.870

GRAVY (calculated)

0.175

Length

1016 amino acids

Sequence
(BLAST)

0001: MEDYIKDNYG EVKPKNSSEE ALQRWRKLCW LVKNPKRRFR FTANLSKRFE ARAIQRSNQE KLRVAVLVSQ AALSFIQGVS YTVPEEVKAA GFQICGDELG
0101: SIVEGHNLRK LKVHGAVEGI AKKLSTSTTN GICTSADLLS RRKEIYGINK FIESPPRGFW IFVWEALQDT TLMILGVCAF VSLVVGIMTE GWPKGAHDGL
0201: GIVASILLVV FVTATSDYRQ SLQFKDLDKE KKKITVQVTR NGYRQKISIY DLLPGDIVHL AIGDQVPADG LFLSGFSLLI DESSLTGESE PINVTAENPF
0301: LLSGTKVRDG SCKMLITTVG MRTQWGKLMA TLSEGGDDET PLQVKLNGVA TIIGKIGLFF AVITFAVLVQ GLYSRKLGEG SQWSWSMDDA QEMLEYFAIA
0401: VTIVVVAVPE GLPLAVTLSL AFAMKKMMND KALVRHLAAC ETMGSATTIC SDKTGTLTTN HMTVVKACIC GKIIETESSK DGSNICSEVS NSALKILIQS
0501: IFNNTGGEIV KNEDGKIEIL GTPTETALLE FGLLLGGNFQ EERQSSRLVK VEPFNSTKKR MGVVIELPGK GLRAHCKGAS EIILASCDSF LNSSGEVVPL
0601: DEASINHLND TIDLFANEAL RTLCLAYKDI GDEYPAETPI PFEGYTCIGI VGIKDPVRPG VKESVAICRS AGITVRMVTG DNINTAKAIA RECGILTDDG
0701: VVIEGPVFRM QSEAELQQII PKLQVMARSS PMDKHTLVKH LRTTFEEVVA VTGDGTNDAP ALHEADIGLA MGIAGTEVAK ESADVIILDD NFSTIVTVAK
0801: WGRSVYVNIQ KFVQFQLTVN VVALIVNFSS ACLTGSAPLT AVQLLWVNMI MDTLGALALA TEPPNDDLMK RTPVGRKGNF ISNVMWRNIL GQSFYQFVVI
0901: WYLQTTGKAL FHLDGSDADL ILNTVIFNSF VFCQVFNEIS SRDMEKINVF KGILDNYVFV AVLSSTALFQ IIIVEFLGTF ASTSPLTFHQ WFTSVAIGFL
1001: GMPIAAAIKM IPVGSS

Best Arabidopsis Sequence Match ( AT1G27770.4 )
(BLAST)

0001: MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP
0101: DELGSIVEGH DLKKLKIHGG TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA ACAFVSLIVG ILMEGWPIGA
0201: HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV
0301: EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY
0401: FAVAVTIVVV AVPEGLPLAV TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV NGPDAAMKFA SGIPESAVKL
0501: LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE
0601: VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL
0701: TDDGIAIEGP EFREKSDEEL LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT EVAKESADVI ILDDNFSTIV
0801: TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ
0901: LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII
1001: LGFLGMPVAA ALKMIPVGSH

Arabidopsis Description

ACA1Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178WD16]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.