Factsheet for Solyc01g096190.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 2
peroxisome 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000352	Potato	peroxisome	95.71	95.71
VIT_15s0046g00040.t01	Wine grape	plasma membrane	84.45	84.21
KRH06423	Soybean	plasma membrane	80.63	79.94
KRH47857	Soybean	plasma membrane	80.25	78.38
AT4G00900.1	Thale cress	plasma membrane	77.58	77.13
Bra037404.1-P	Field mustard	plasma membrane	76.91	76.47
CDY07153	Canola	plasma membrane	76.81	76.38
CDY51719	Canola	plasma membrane	76.81	76.38
GSMUA_AchrUn_...	Banana	cytosol, golgi, plasma membrane	26.72	72.35
GSMUA_AchrUn_...	Banana	peroxisome, plasma membrane, vacuole	35.02	68.09
GSMUA_Achr1P04000_001	Banana	plasma membrane	59.64	67.71
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	66.6	65.79
Solyc07g022790.2.1	Tomato	plasma membrane	19.37	51.26
Solyc07g022780.2.1	Tomato	mitochondrion	14.98	42.9
Solyc01g097400.1.1	Tomato	cytosol	9.45	36.0
Solyc10g079300.1.1	Tomato	plasma membrane	25.67	28.65
Solyc04g077870.2.1	Tomato	plasma membrane	27.39	28.25
Solyc02g064680.2.1	Tomato	nucleus, unclear	26.62	27.43
Solyc02g092450.2.1	Tomato	nucleus, unclear	26.53	27.34
Solyc07g008320.2.1	Tomato	nucleus	27.96	27.1
Solyc03g123890.2.1	Tomato	plasma membrane	26.72	26.74
Solyc04g016260.2.1	Tomato	unclear	26.43	26.56
Solyc07g065300.1.1	Tomato	plasma membrane	18.7	20.12
Solyc09g082870.1.1	Tomato	plasma membrane	19.85	19.3
Solyc09g082890.1.1	Tomato	peroxisome, plasma membrane	6.87	18.75

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
ProteinID:AAA34138.1	EMBL:AF050495	EMBL:AF050496	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005388	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006810	GO:GO:0006811
GO:GO:0006816	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030176
GO:GO:0046872	GO:GO:0070588	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF00702	PFAM:PF13246
PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF36	InterPro:P_typ_ATPase	UniProt:Q42883
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc01g096190.2
EnsemblPlants:Solyc01g096190.2.1	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI00000A297C	:	:

Description

LCA1Calcium-transporting ATPase, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q42883]

Coordinates

chr1:+:87285030..87290897

Molecular Weight (calculated)

116134.0 Da

IEP (calculated)

5.534

GRAVY (calculated)

0.096

Length

1048 amino acids

Sequence
(BLAST)

0001: MEEKPFPAWS WSVDQCLKEY QVKLEKGLST YEVDKRRERY GLNELEKEKG KPLWRLVLEQ FDDTLVKILL GAAFISFVLA YVNQDETGES GFEAYVEPLV
0101: ILWILVLNAI VGVWQESNAE KALEALKEMQ GESAKVLRDG YLVPDFPAKE LVPGDIVELR VGDKVPADMR VATLKSSTLR VEQSSLTGES MPVTKSTDFL
0201: ATDDCELQAK ENMVFAGTTV VNGSCICIVV NTGMCTEIGK IQRQIHDASM EESDTPLKKK LDEFGNRLTF AIGVVCLVVW AINYKYFLSW EVVDDWPSDF
0301: RFSFEKCAYY FKIAVALAVA AIPEGLPSVI TTCLALGTRK MAQKNAIVRK LQSVETLGCT TVICSDKTGT LTTNQMSVSE FFTLGRKTTA CRVFGVEGTT
0401: YDPKDGGIMN WNCCKMDANL LLMAEICAIC NDAGVFCDGR LFKATGLPTE AALKVLVEKM GVPDSKARCK IRDAQIVSSY LIDRNTVKLG CCDWWMKRSK
0501: RVATLEFDRV RKSMGVIVRE PNGSNRLLVK GAFESLLERS TYVQLADGST VPLDESCRQL LLLKQLEMSS KGLRCLGLAY KDDLGELSGY YAATHPAHKK
0601: LLDPSCYSSI ESDLVFVGVV GLRDPPREEV HRAVNDCRRA GIKIMVITGD NKSTAEAVCR EIQLFSNGEN LRGSSFTGKE FMAFSSQQQI EILSQDGGKV
0701: FSRAEPRHKQ EIVRMLKEMG EIVAMTGDGV NDAPALKLAD IGIAMGITGT EVAKEASDMV LADDNFSTIV SAVAEGRSIY NNMKAFIRYM ISSNVGEVIS
0801: IFLTAVLGIP ECLIPVQLLW VNLVTDGPPA TALGFNPADV DIMQKPPRKN TDALINSWVF FRYMVIGSYV GIATVGIFIV WYTQASFLGI NIVSDGHTLV
0901: ELSQLRNWGE CSTWTNFTVS PFKAGNRLIT FSDPCEYFTV GKVKAMTLSL SVLVAIEMFN SLNALSEDNS LIKMPPWRNP WLLVAMSLSF ALHSVILYVP
1001: FLADIFGIVP LSLYEWLLVI LLSAPVILID EVLKFVGRRR RRTKLKAA

Best Arabidopsis Sequence Match ( AT4G00900.1 )
(BLAST)

0001: MEEEKSFSAW SWSVEQCLKE YKTRLDKGLT SEDVQIRRQK YGFNELAKEK GKPLWHLVLE QFDDTLVKIL LGAAFISFVL AFLGEEHGSG SGFEAFVEPF
0101: VIVLILILNA VVGVWQESNA EKALEALKEM QCESAKVLRD GNVLPNLPAR ELVPGDIVEL NVGDKVPADM RVSGLKTSTL RVEQSSLTGE AMPVLKGANL
0201: VVMDDCELQG KENMVFAGTT VVNGSCVCIV TSIGMDTEIG KIQRQIHEAS LEESETPLKK KLDEFGSRLT TAICIVCVLV WMINYKNFVS WDVVDGYKPV
0301: NIKFSFEKCT YYFKIAVALA VAAIPEGLPA VITTCLALGT RKMAQKNAIV RKLPSVETLG CTTVICSDKT GTLTTNQMSA TEFFTLGGKT TTTRVFSVSG
0401: TTYDPKDGGI VDWGCNNMDA NLQAVAEICS ICNDAGVFYE GKLFRATGLP TEAALKVLVE KMGIPEKKNS ENIEEVTNFS DNGSSVKLAC CDWWNKRSKK
0501: VATLEFDRVR KSMSVIVSEP NGQNRLLVKG AAESILERSS FAQLADGSLV ALDESSREVI LKKHSEMTSK GLRCLGLAYK DELGEFSDYS SEEHPSHKKL
0601: LDPSSYSNIE TNLIFVGVVG LRDPPREEVG RAIEDCRDAG IRVMVITGDN KSTAEAICCE IRLFSENEDL SQSSFTGKEF MSLPASRRSE ILSKSGGKVF
0701: SRAEPRHKQE IVRMLKEMGE IVAMTGDGVN DAPALKLADI GIAMGITGTE VAKEASDMVL ADDNFSTIVS AVAEGRSIYN NMKAFIRYMI SSNVGEVISI
0801: FLTAALGIPE CMIPVQLLWV NLVTDGPPAT ALGFNPADID IMKKPPRKSD DCLIDSWVLI RYLVIGSYVG VATVGIFVLW YTQASFLGIS LISDGHTLVS
0901: FTQLQNWSEC SSWGTNFTAT PYTVAGGLRT IAFENNPCDY FTLGKVKPMT LSLTVLVAIE MFNSLNALSE DNSLLTMPPW RNPWLLVAMT VSFALHCVIL
1001: YVPFLANVFG IVPLSFREWF VVILVSFPVI LIDEALKFIG RCRRTRIKKK IKTM

Arabidopsis Description

ECA2Calcium-transporting ATPase 2, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:O23087]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.