Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • peroxisome 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037404.1-P Field mustard plasma membrane 99.53 99.53
CDY07153 Canola plasma membrane 98.67 98.67
AT4G00900.1 Thale cress plasma membrane 93.07 93.07
VIT_15s0046g00040.t01 Wine grape plasma membrane 78.65 78.88
KRH06423 Soybean plasma membrane 77.32 77.11
Solyc01g096190.2.1 Tomato plasma membrane 76.38 76.81
PGSC0003DMT400000352 Potato peroxisome 76.28 76.72
KRH47857 Soybean plasma membrane 76.85 75.49
CDY06279 Canola plasma membrane 25.9 72.8
GSMUA_AchrUn_... Banana cytosol, golgi, plasma membrane 26.09 71.06
CDX95122 Canola cytosol, plasma membrane, vacuole 20.3 69.93
GSMUA_AchrUn_... Banana peroxisome, plasma membrane, vacuole 35.1 68.65
GSMUA_Achr1P04000_001 Banana plasma membrane 58.16 66.41
CDY06268 Canola plasma membrane 63.19 65.29
CDY09907 Canola plasma membrane 62.71 64.93
CDY22720 Canola peroxisome, plasma membrane 60.44 63.26
CDY28053 Canola plasma membrane 63.19 61.21
CDY35928 Canola plasma membrane 59.87 60.56
CDY68458 Canola cytosol, peroxisome, plasma membrane 34.72 54.95
CDY61305 Canola cytosol 23.34 50.51
CDY22604 Canola plasma membrane 44.97 47.49
CDX94924 Canola plasma membrane 36.72 46.68
CDY70305 Canola plasma membrane 10.82 46.34
CDY53835 Canola nucleus, plasma membrane, plastid 13.28 45.45
CDY65296 Canola cytosol 2.47 39.39
CDX93457 Canola cytosol, nucleus, plasma membrane 39.94 34.94
CDY19574 Canola plasma membrane 17.65 30.9
CDY49443 Canola plasma membrane 27.04 28.11
CDY22420 Canola plasma membrane 27.04 28.05
CDX76883 Canola plasma membrane 26.95 28.01
CDY14779 Canola plasma membrane 26.38 28.0
CDY44033 Canola plasma membrane 27.04 27.97
CDY40822 Canola plasma membrane 26.76 27.76
CDX72644 Canola plasma membrane 26.57 27.61
CDY29571 Canola plasma membrane 26.57 27.61
CDY34219 Canola plasma membrane 26.57 27.53
CDY10680 Canola plasma membrane 26.47 27.51
CDX90109 Canola plasma membrane 26.38 27.34
CDY11764 Canola plasma membrane 26.38 27.34
CDY10319 Canola plasma membrane 26.57 27.32
CDY06915 Canola plasma membrane 26.66 27.23
CDX93910 Canola plasma membrane 26.38 26.91
CDX72049 Canola plasma membrane 25.9 26.63
CDY06114 Canola plasma membrane 25.81 26.54
CDY33829 Canola plasma membrane 25.81 26.54
CDY38264 Canola plasma membrane 26.95 26.47
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 25.71 26.44
CDY65295 Canola cytosol 6.64 26.42
CDY20693 Canola cytosol 26.66 26.26
CDX89371 Canola plasma membrane 8.35 26.19
CDX82212 Canola plasma membrane 26.85 25.96
CDY32412 Canola plasma membrane 26.85 25.96
CDY50072 Canola plasma membrane 26.85 25.84
CDY19575 Canola plasma membrane 26.85 25.84
CDY27537 Canola plasma membrane 26.76 25.82
CDY37311 Canola plasma membrane 26.66 25.76
CDY43534 Canola cytosol 25.33 25.19
CDX68595 Canola plasma membrane 25.14 25.05
CDY46716 Canola cytosol 25.43 24.98
CDY32902 Canola plasma membrane 26.47 24.87
CDY30184 Canola plasma membrane 24.86 24.67
CDY53981 Canola cytosol 26.85 24.44
CDY38720 Canola plasma membrane 20.87 23.09
CDX94389 Canola plasma membrane 21.54 22.15
CDX89375 Canola plasma membrane 21.54 22.02
CDY38719 Canola plasma membrane 19.92 21.97
CDX94386 Canola cytosol 21.16 21.2
CDX95120 Canola mitochondrion 0.57 4.17
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.60.120.1500Gene3D:2.70.150.10MapMan:24.1.2.2.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000
GO:A0A078IQN2UniProt:A0A078IQN2InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_N
InterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY51719ProteinID:CDY51719ProteinID:CDY51719.1ncoils:Coil
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0016020GO:GO:0016021GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00004070001InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:IPR023299PFAM:PF00122PFAM:PF00689PFAM:PF00690PFAM:PF00702
PFAM:PF13246PRINTS:PR00119PRINTS:PR00121ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF36
InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665
TIGRFAMs:TIGR01494TMHMM:TMhelixUniParc:UPI0004EE94D0SEG:seg::
Description
BnaA09g52060DBnaA09g52060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQN2]
Coordinates
chrLK033021:-:52452..57946
Molecular Weight (calculated)
115500.0 Da
IEP (calculated)
5.003
GRAVY (calculated)
0.061
Length
1054 amino acids
Sequence
(BLAST)
0001: MEEEKKSLSP WSWSVDQCLK EYNTTLDKGL TTEDVQTRRE KHGYNELAKE KGKPLWHLVL EQFDDTLVKI LLGAAFISFV LAFLGEEHGS GSGAGFEAFV
0101: EPFVIVLILI LNAVVGVWQE SNAEKALEAL KEMQCESAKV IRDGVVLPNI PARELVPGDV VELQVGDKVP ADMRVSGLKT STLRVEQSSL TGEAMPVLKG
0201: ANLVVVNDCE LQAKENMVFA GTTVVNGSCV SIVTSIGMDT EIGKIQKQIH EASLEESDTP LKKKLDEFGS RLTTSICVVC VLVWIINYKN FVSWDATDGS
0301: FKFSFEKCTY YFKIAVALAV AAIPEGLPAV ITTCLALGTR KMAQKNAIVR KLPSVETLGC TTVICSDKTG TLTTNQMSAT EFFTLGGKTA VTRVFSVDGT
0401: TYDPKDGGIV DWGGYEMDAN LQAVAEICSV CNDAGVFYEG KLFRATGLPT EAALKVLVEK MGVPEEKNGE SIQEATNDSD NGSSVKLACC DWWNKRSKRL
0501: ATLEFDRVRK SMSVIVREPN GQNRLLVKGA AESILERSSY TQLADGSLVA LDESSRDVIL TKHSEMTSKG LRCLGLAYKD ELGEFSDYTS ESHPSHKKLL
0601: DPSSYSSIET NLIFVGVVGL RDPPREEVGR AIEDCREAGI RVMVITGDNK STAEAICCEI RLFSDNEDLS QSSFTGKEFM SLPASRRSEI LSKPGGKVFS
0701: RAEPRHKQEI VRMLKDMGEI VAMTGDGVND APALKLADIG IAMGITGTEV AKEASDMVLA DDNFSTIVSA VAEGRSIYNN MKAFIRYMIS SNVGEVISIF
0801: LTAALGIPEC MIPVQLLWVN LVTDGPPATA LGFNPADIDI MKKPPRKSDD CLIDSWVLIR YLVIGSYVGV ATVGIFVLWY TQASFLGVSL ITDGHTLVSF
0901: TQLQNWSECS SWGTNFTASP YTIAGGLRTV AFENNPCDYF TLGKVKPMTL SLSVLVAIEM FNSLNALSED NSLLKMPPWR NPWLLVAMTV SFGLHCVILY
1001: VPFLANVFGI VPLSFREWFV VILVSFPVIL IDEGLKFIGR WRRQRIKNKI KKTM
Best Arabidopsis Sequence Match ( AT4G00900.1 )
(BLAST)
0001: MEEEKSFSAW SWSVEQCLKE YKTRLDKGLT SEDVQIRRQK YGFNELAKEK GKPLWHLVLE QFDDTLVKIL LGAAFISFVL AFLGEEHGSG SGFEAFVEPF
0101: VIVLILILNA VVGVWQESNA EKALEALKEM QCESAKVLRD GNVLPNLPAR ELVPGDIVEL NVGDKVPADM RVSGLKTSTL RVEQSSLTGE AMPVLKGANL
0201: VVMDDCELQG KENMVFAGTT VVNGSCVCIV TSIGMDTEIG KIQRQIHEAS LEESETPLKK KLDEFGSRLT TAICIVCVLV WMINYKNFVS WDVVDGYKPV
0301: NIKFSFEKCT YYFKIAVALA VAAIPEGLPA VITTCLALGT RKMAQKNAIV RKLPSVETLG CTTVICSDKT GTLTTNQMSA TEFFTLGGKT TTTRVFSVSG
0401: TTYDPKDGGI VDWGCNNMDA NLQAVAEICS ICNDAGVFYE GKLFRATGLP TEAALKVLVE KMGIPEKKNS ENIEEVTNFS DNGSSVKLAC CDWWNKRSKK
0501: VATLEFDRVR KSMSVIVSEP NGQNRLLVKG AAESILERSS FAQLADGSLV ALDESSREVI LKKHSEMTSK GLRCLGLAYK DELGEFSDYS SEEHPSHKKL
0601: LDPSSYSNIE TNLIFVGVVG LRDPPREEVG RAIEDCRDAG IRVMVITGDN KSTAEAICCE IRLFSENEDL SQSSFTGKEF MSLPASRRSE ILSKSGGKVF
0701: SRAEPRHKQE IVRMLKEMGE IVAMTGDGVN DAPALKLADI GIAMGITGTE VAKEASDMVL ADDNFSTIVS AVAEGRSIYN NMKAFIRYMI SSNVGEVISI
0801: FLTAALGIPE CMIPVQLLWV NLVTDGPPAT ALGFNPADID IMKKPPRKSD DCLIDSWVLI RYLVIGSYVG VATVGIFVLW YTQASFLGIS LISDGHTLVS
0901: FTQLQNWSEC SSWGTNFTAT PYTVAGGLRT IAFENNPCDY FTLGKVKPMT LSLTVLVAIE MFNSLNALSE DNSLLTMPPW RNPWLLVAMT VSFALHCVIL
1001: YVPFLANVFG IVPLSFREWF VVILVSFPVI LIDEALKFIG RCRRTRIKKK IKTM
Arabidopsis Description
ECA2Calcium-transporting ATPase 2, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:O23087]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.