CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus

Predictor Summary:

cytosol 1
nucleus 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plasma membrane, plastid
BaCelLo:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g022790.2.1	Tomato	plasma membrane	41.23	32.07
CDY65296	Canola	cytosol	6.82	31.82
CDX94924	Canola	plasma membrane	83.44	31.0
CDY22604	Canola	plasma membrane	87.34	26.95
AT1G10130.1	Thale cress	plasma membrane	84.42	26.05
VIT_18s0001g08850.t01	Wine grape	plasma membrane	74.03	24.6
KRH61432	Soybean	plasma membrane	75.0	23.08
Zm00001d033886_P001	Maize	mitochondrion	71.75	22.88
GSMUA_Achr6P23080_001	Banana	plasma membrane	72.4	22.64
KXG37640	Sorghum	plasma membrane	71.1	21.9
TraesCS4B01G061900.1	Wheat	plasma membrane	70.78	21.8
HORVU4Hr1G010200.3	Barley	plasma membrane	70.78	21.8
TraesCS4A01G253500.1	Wheat	peroxisome	70.45	21.7
TraesCS4D01G060900.1	Wheat	plasma membrane	70.45	21.7
CDX93457	Canola	cytosol, nucleus, plasma membrane	84.74	21.66
Os03t0730800-01	Rice	plasma membrane	38.31	18.44
CDY06279	Canola	plasma membrane	21.1	17.33
CDX95122	Canola	cytosol, plasma membrane, vacuole	15.58	15.69
CDY19574	Canola	plasma membrane	29.87	15.28
CDY22720	Canola	peroxisome, plasma membrane	47.08	14.4
CDY09907	Canola	plasma membrane	47.08	14.24
CDY06268	Canola	plasma membrane	47.08	14.22
CDX89371	Canola	plasma membrane	14.94	13.69
Solyc07g022780.2.1	Tomato	mitochondrion	15.91	13.39
CDY07153	Canola	plasma membrane	45.78	13.38
CDY51719	Canola	plasma membrane	45.45	13.28
CDY68458	Canola	cytosol, peroxisome, plasma membrane	28.57	13.21
CDY65295	Canola	cytosol	11.36	13.21
CDY35928	Canola	plasma membrane	42.86	12.67
CDY28053	Canola	plasma membrane	42.86	12.13
CDY14779	Canola	plasma membrane	34.42	10.67
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	35.06	10.54
CDX90109	Canola	plasma membrane	34.74	10.52
CDY11764	Canola	plasma membrane	34.74	10.52
CDY06915	Canola	plasma membrane	34.74	10.37
CDY06114	Canola	plasma membrane	34.09	10.24
CDY33829	Canola	plasma membrane	34.09	10.24
CDX76883	Canola	plasma membrane	33.44	10.16
CDY49443	Canola	plasma membrane	33.44	10.16
CDX72049	Canola	plasma membrane	33.77	10.15
CDY29571	Canola	plasma membrane	32.79	9.96
CDX72644	Canola	plasma membrane	32.79	9.96
CDY22420	Canola	plasma membrane	32.79	9.94
CDY44033	Canola	plasma membrane	32.79	9.91
CDY10680	Canola	plasma membrane	31.17	9.47
CDY40822	Canola	plasma membrane	31.17	9.45
CDY34219	Canola	plasma membrane	31.17	9.44
CDY38264	Canola	plasma membrane	32.79	9.41
CDX93910	Canola	plasma membrane	31.49	9.39
CDY10319	Canola	plasma membrane	31.17	9.37
CDY20693	Canola	cytosol	32.14	9.25
CDY43534	Canola	cytosol	31.82	9.25
CDY30184	Canola	plasma membrane	31.82	9.23
CDY46716	Canola	cytosol	31.82	9.13
CDX68595	Canola	plasma membrane	31.17	9.07
CDY32902	Canola	plasma membrane	32.47	8.91
CDY32412	Canola	plasma membrane	31.17	8.81
CDX82212	Canola	plasma membrane	31.17	8.81
CDY27537	Canola	plasma membrane	30.84	8.7
CDY50072	Canola	plasma membrane	30.84	8.68
CDY19575	Canola	plasma membrane	30.84	8.68
CDY53981	Canola	cytosol	32.47	8.64
CDY37311	Canola	plasma membrane	30.52	8.62
CDX89375	Canola	plasma membrane	27.27	8.15
CDX94389	Canola	plasma membrane	26.95	8.1
CDX94386	Canola	cytosol	27.27	7.98
CDY38720	Canola	plasma membrane	24.68	7.97
CDY38719	Canola	plasma membrane	24.68	7.95
CDY70305	Canola	plasma membrane	3.9	4.88
CDY61305	Canola	cytosol	2.27	1.44
CDX95120	Canola	mitochondrion	0.0	0.0

Protein Annotations

MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078IS06	UniProt:A0A078IS06	InterPro:ATPase_P-typ_cyto_dom_N
EnsemblPlants:CDY53835	ProteinID:CDY53835	ProteinID:CDY53835.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00011523001	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	PRINTS:PR00120
PANTHER:PTHR42861	PANTHER:PTHR42861:SF35	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81660	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0004EDC26B	:	:	:	:

Description

BnaA09g57270DBnaA09g57270D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IS06]

Coordinates

chrLK033241:+:67603..71066

Molecular Weight (calculated)

33810.1 Da

IEP (calculated)

7.114

GRAVY (calculated)

0.125

Length

308 amino acids

Sequence
(BLAST)

001: MHLTEGKKSR ELWTTYIVLI DCQLYQKSVK VYVLEFTRDR KMMSVLCSHK QMDVMFSKGA PESIIARCTK LLCNSDGSVV PLTAAFRAEL ESRFASFGDE
101: TLRCLALAFK TVPHGQQTIS HDNENDLTFI GLVGMLDPPR KEVRDAMLAC MTAGIRVIVV TGDNKSTAES ICRKIGAFDN LVDFSGLSYT ASEFERLPAM
201: QQTTALQRMT LFSRVEPSHK RMLVEALQNQ NEVVAMTGDG VNDAPALKKA DIGIAMGSGT AVAKSASDMV LADDNFASIV AVCLFSCIFV IVISFWLILK
301: HTSHSSSA

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.