CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033886_P001	Maize	mitochondrion	95.2	98.55
TraesCS4D01G060900.1	Wheat	plasma membrane	94.9	94.9
HORVU4Hr1G010200.3	Barley	plasma membrane	94.8	94.8
TraesCS4A01G253500.1	Wheat	peroxisome	94.5	94.5
TraesCS4B01G061900.1	Wheat	plasma membrane	94.5	94.5
Os03t0730800-01	Rice	plasma membrane	60.0	93.75
GSMUA_Achr6P23080_001	Banana	plasma membrane	84.0	85.28
VIT_18s0001g08850.t01	Wine grape	plasma membrane	76.7	82.74
KRH61432	Soybean	plasma membrane	82.6	82.52
Solyc07g022790.2.1	Tomato	plasma membrane	32.5	82.07
AT1G10130.1	Thale cress	plasma membrane	80.3	80.46
Solyc07g022780.2.1	Tomato	mitochondrion	29.3	80.05
CDY22604	Canola	plasma membrane	79.4	79.56
CDX94924	Canola	plasma membrane	65.2	78.65
CDY70305	Canola	plasma membrane	19.1	77.64
Bra031701.1-P	Field mustard	plasma membrane	78.3	72.17
CDY53835	Canola	nucleus, plasma membrane, plastid	21.9	71.1
Bra019960.1-P	Field mustard	plasma membrane	72.5	69.38
CDX93457	Canola	cytosol, nucleus, plasma membrane	69.2	57.43
EES18919	Sorghum	plasma membrane	47.9	45.27
EER92445	Sorghum	plasma membrane	47.3	44.58
EES16530	Sorghum	plasma membrane	27.3	26.33
EES07943	Sorghum	plasma membrane	26.8	25.84
EER91614	Sorghum	plasma membrane	26.1	25.79
EER95313	Sorghum	plasma membrane	26.0	25.49
EER99121	Sorghum	cytosol, peroxisome, plasma membrane	27.4	25.49
EES15422	Sorghum	cytosol, endoplasmic reticulum, plasma membrane, plastid	26.0	25.47
EES12809	Sorghum	plasma membrane	27.7	25.37
EER93815	Sorghum	plastid	26.2	25.36
KXG23838	Sorghum	plasma membrane	25.8	25.29
EES15337	Sorghum	cytosol, nucleus, plasma membrane	27.4	25.21
OQU88174	Sorghum	cytosol, nucleus, plasma membrane	26.1	24.95
KXG29596	Sorghum	cytosol, nucleus, plasma membrane	27.2	24.93
EES18436	Sorghum	plasma membrane	25.8	24.76

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	UniProt:A0A1B6QIC1
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005768	GO:GO:0005783	GO:GO:0005794	GO:GO:0005802	GO:GO:0006810	GO:GO:0006811
GO:GO:0006816	GO:GO:0007275	GO:GO:0008150	GO:GO:0012505	GO:GO:0015410	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0033017	GO:GO:0048364	GO:GO:0055071	GO:GO:0070588
GO:GO:0071421	GO:GO:0099132	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
EnsemblPlants:KXG37640	ProteinID:KXG37640	ProteinID:KXG37640.1	InterPro:P-type_ATPase_IIA	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PFAM:PF13246	PRINTS:PR00119	ScanProsite:PS00154	PANTHER:PTHR42861
PANTHER:PTHR42861:SF6	InterPro:P_typ_ATPase	InterPro:SERCA3	SMART:SM00831	EnsemblPlantsGene:SORBI_3001G103300	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01116	TIGRFAMs:TIGR01494	TMHMM:TMhelix
UniParc:UPI00081ABD6A	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:7907267..7928276

Molecular Weight (calculated)

109730.0 Da

IEP (calculated)

6.284

GRAVY (calculated)

0.193

Length

1000 amino acids

Sequence
(BLAST)

001: MEDAYAKSVA EVLEAFGVDQ TKGLSDSQVE QHARLYGKNV LPKEESTPFW KLVLKQFDDL LVKILIAAAV ISFLLARMNG ETGLSAFLEP SVIFMILAAN
101: AAVGVITETN AEKALEELRA YQADIATVLR NGCFSILPAT ELVPGDIVEV AVGCKVPADM RMVEMLSHQL RVDQAILTGE SCSVAKELES TPAMNAVYQD
201: KTNILFSGTV VVAGRARAIV IGVGSNTAMG SIRDAMLRTE DEATPLKKKL DEFGTFLAKV IAGICILVWV VNIGHFRDPS HGGFVRGAIH YFKVAVALAV
301: AAIPEGLPAV VTTCLALGTK RMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KVCVVRSVHQ RPMTDEYSIS GTTFAPDGFI YDAGGLQLEF
401: PPQSPCLLHL AMCSALCNES TLQYNPDKKS YEKIGESTEV ALRVLVEKVG LPGFDSMPSA LNMLTKHERA SYCNRYWENQ FRKISVLEFS RDRKMMSVLC
501: SRKHQEIMFS KGAPESIMAR CTHILCNDDG SSVPLTMDIR NELEARLQSF AGKDTLRCLA LALKRMPAGQ QSICYGDEAN LTFIGLVGML DPPREEVWDA
601: IHSCMSAGIR VIVVTGDNKS TAESLCRQIG AFEHLNDFAG YSYTASEFEG LPPLERTNAL QRMVLFSRVE PSHKKMLVEA LQTHNEVVAM TGDGVNDAPA
701: LKKADIGIAM GSGTAVAKSA SDMVLADDNF ATIVAAVAEG RAIYNNTKQF IRYMISSNIG EVVCIFVAAV LGMPDTLIPV QLLWVNLVTD GLPATAIGFN
801: KPDGNIMTVK PRKVNEAVVS GWLFFRYLVI GAYVGLATIA GFVWWFVYSE NGPRLPYSEL VNFDSCSTRQ TSYPCSIFED RHPSTVSMTV LVVVEMFNAL
901: NNLSENQSLL VIHPWSNLWL VGSIILTMIL HVAVLYIEPL SALFSVSPLS WVEWKIVLYL SFPVILIDEV LKFFSRSPRG RRFPLRLWRR EILPKESRDN

Best Arabidopsis Sequence Match ( AT1G10130.1 )
(BLAST)

001: MEDAYARSVS EVLDFFGVDP TKGLSDSQVV HHSRLYGRNV LPEEKRTPFW KLVLKQFDDL LVKILIVAAI VSFVLALANG ETGLTAFLEP FVILLILAAN
101: AAVGVITETN AEKALEELRA YQANIATVLR NGCFSILPAT ELVPGDIVEV TVGCKIPADL RMIEMSSNTF RVDQAILTGE SCSVEKDVDC TLTTNAVYQD
201: KKNILFSGTD VVAGRGRAVV IGVGSNTAMG SIHDSMLQTD DEATPLKKKL DEFGSFLAKV IAGICVLVWV VNIGHFSDPS HGGFFKGAIH YFKIAVALAV
301: AAIPEGLPAV VTTCLALGTK KMARLNAIVR SLPSVETLGC TTVICSDKTG TLTTNMMSVS KICVVQSAEH GPMINEFTVS GTTYAPEGTV FDSNGMQLDL
401: PAQSPCLHHL AMCSSLCNDS ILQYNPDKDS YEKIGESTEV ALRVLAEKVG LPGFDSMPSA LNMLSKHERA SYCNHYWENQ FKKVYVLEFT RDRKMMSVLC
501: SHKQMDVMFS KGAPESIIAR CNKILCNGDG SVVPLTAAGR AELESRFYSF GDETLRCLAL AFKTVPHGQQ TISYDNENDL TFIGLVGMLD PPREEVRDAM
601: LACMTAGIRV IVVTGDNKST AESLCRKIGA FDNLVDFSGM SYTASEFERL PAVQQTLALR RMTLFSRVEP SHKRMLVEAL QKQNEVVAMT GDGVNDAPAL
701: KKADIGIAMG SGTAVAKSAS DMVLADDNFA SIVAAVAEGR AIYNNTKQFI RYMISSNIGE VVCIFVAAVL GIPDTLAPVQ LLWVNLVTDG LPATAIGFNK
801: QDSDVMKAKP RKVGEAVVTG WLFFRYLVIG VYVGLATVAG FIWWFVYSDG GPKLTYSELM NFETCALRET TYPCSIFEDR HPSTVAMTVL VVVEMFNALN
901: NLSENQSLLV ITPRSNLWLV GSIILTMLLH VLILYVHPLA VLFSVTPLSW AEWTAVLYLS FPVIIIDELL KFLSRNTGMR FRFRLRKADL LPKDRRDK

Arabidopsis Description

ECA3Calcium-transporting ATPase 3, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SY55]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.