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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d011896_P001 Maize cytosol, nucleus, plasma membrane 94.36 94.27
Zm00001d042164_P002 Maize cytosol, nucleus, plasma membrane 93.5 93.59
Os01t0939100-01 Rice plasma membrane 87.95 88.21
HORVU3Hr1G102890.1 Barley plasma membrane 85.18 85.43
TraesCS3B01G519000.1 Wheat plasma membrane 84.89 85.14
TraesCS3A01G475500.1 Wheat plasma membrane 84.89 85.14
TraesCS3D01G470100.1 Wheat plasma membrane 84.61 84.85
GSMUA_Achr5P08080_001 Banana plasma membrane 56.41 69.66
GSMUA_Achr9P17740_001 Banana plasma membrane 53.92 69.54
VIT_13s0158g00360.t01 Wine grape plasma membrane 66.54 67.18
EES16530 Sorghum plasma membrane 65.68 66.25
AT3G57330.1 Thale cress cytosol, peroxisome, plasma membrane, plastid 64.91 66.24
VIT_08s0007g08960.t01 Wine grape plasma membrane 65.39 66.21
CDY14779 Canola plasma membrane 62.81 66.16
CDX67686 Canola cytosol, peroxisome, plasma membrane, plastid 64.82 66.15
Bra003276.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 64.72 66.05
Bra016926.1-P Field mustard plasma membrane 65.11 65.99
EES07943 Sorghum plasma membrane 65.39 65.96
CDY06915 Canola plasma membrane 64.91 65.79
CDY33829 Canola plasma membrane 64.44 65.76
KRH23922 Soybean plasma membrane 53.44 65.61
CDY06114 Canola plasma membrane 64.15 65.46
CDX72049 Canola plasma membrane 63.96 65.27
Bra007319.1-P Field mustard plasma membrane 63.67 65.23
AT2G41560.1 Thale cress plasma membrane 63.86 64.85
KRH66886 Soybean plasma membrane 64.05 64.61
PGSC0003DMT400021028 Potato plasma membrane 57.74 64.26
Solyc04g016260.2.1 Tomato unclear 63.96 64.14
KRG95209 Soybean plasma membrane 63.38 64.06
PGSC0003DMT400033064 Potato plasma membrane 64.05 64.05
Solyc10g079300.1.1 Tomato plasma membrane 57.27 63.79
KRH33214 Soybean endoplasmic reticulum 63.1 63.77
KRH39871 Soybean plasma membrane, plastid 63.1 63.4
KRH72028 Soybean cytosol, nucleus, plasma membrane 62.62 63.28
EES15422 Sorghum cytosol, endoplasmic reticulum, plasma membrane, plastid 59.85 61.31
EER95313 Sorghum plasma membrane 59.46 60.98
KXG23838 Sorghum plasma membrane 59.37 60.88
EES18436 Sorghum plasma membrane 60.23 60.46
EER93815 Sorghum plastid 54.3 54.99
KXG29596 Sorghum cytosol, nucleus, plasma membrane 47.51 45.55
EER99121 Sorghum cytosol, peroxisome, plasma membrane 45.7 44.47
EES12809 Sorghum plasma membrane 46.37 44.41
EES15337 Sorghum cytosol, nucleus, plasma membrane 45.7 43.97
EER91614 Sorghum plasma membrane 40.54 41.9
EER92445 Sorghum plasma membrane 26.86 26.48
KXG37640 Sorghum plasma membrane 24.95 26.1
EES18919 Sorghum plasma membrane 26.39 26.09
Protein Annotations
Gene3D:1.20.1110.10Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000UniProt:A0A1W0W1B6
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sf
InterPro:Ca_ATPase_N_domncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005388GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005524GO:GO:0005575
GO:GO:0006810GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0070588GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214
InterPro:IPR023299EnsemblPlants:OQU88174ProteinID:OQU88174ProteinID:OQU88174.1InterPro:P-type_ATPase_IIBPFAM:PF00122
PFAM:PF00689PFAM:PF00690PFAM:PF00702PFAM:PF12515PRINTS:PR00119PRINTS:PR00120
ScanProsite:PS00154PANTHER:PTHR24093PANTHER:PTHR24093:SF372InterPro:P_typ_ATPaseSMART:SM00831EnsemblPlantsGene:SORBI_3003G420500
SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517
TMHMM:TMhelixUniParc:UPI0009DC93A8SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:+:72557171..72563643
Molecular Weight (calculated)
113314.0 Da
IEP (calculated)
7.719
GRAVY (calculated)
0.128
Length
1046 amino acids
Sequence
(BLAST)
0001: MAYLRNKSME FLKRFEVPAK NPSEDAQRRW REAVGTLVKN RRRRFRMVPD LDKRSEVETQ RRNIQEKLRV ALYVQKAALQ FIDAARKTEH PLPEMARQCG
0101: FSVSAEELAT VVRNHDGKSL RHHRGVDGVA RKVNVSLADG VKSDETSARA EVYGANKYTE KPPRTFWMFL WDASQDMTLL LLAFCAFISV VIGLATEGWP
0201: GGMYDGLGIM LTIFLVVMIT AASDYKQSLQ FRDLDREKKK IDMQVTRDGY RQKVSIYDIV VGDIVHLSIG DQVPADGLYV DGYSLVVDES SLSGESEPVH
0301: LSSANPFLLG GTKVQDGSGR MLVTAVGMRT EWGNLMETLS QGGEDETPLQ VKLNGVATII GKIGLAFAVL TFTVLMARFL VGKANAPGGL LRWKGADALS
0401: VLNFFAVAVT IVVVAVPEGL PLAVTLSLAF AMKKLMQERA LVRHLSACET MGSASCICTD KTGTLTTNHM VVEKVWASGA AQTVSTAKGF DELRLSVSEN
0501: FTRVLLEGVF HCSGSEVVTS KDGRTSVMGT PTETAILEFG LEVEKYTKVE HAAAKKLKVE PFNSVKKTMA VVIASPNAAG HPRAFLKGAS EVVLSRCSSV
0601: IDGTGSVEKL TDAKAKRVAS AIDAFACEAL RTLCLAYQDV GSASDVPGDG YTLIAVFGIK DPLRPGVREA VKTCHDAGIN VRMVTGDNIN TAKAIARECG
0701: ILTDDGIAIE GPEFRAKSPN EMRELIPKIQ VMARSLPLDK HTLVTNLRGM FGEVVAVTGD GTNDAPALHE ADIGLAMGIA GTEVAKENAD VIIMDDNFST
0801: IINVAKWGRS VYINIQKFVQ FQLTVNVVAL MVNFVSASFT GSAPLTIVQL LWVNLIMDTL GALALATEPP NDSMMRRPPV GRGDNFITRV MWRNIVGQSI
0901: YQLAVLGVLI FKGKSLLRLN AGAGDLSDTQ LNTFIFNTFV FCQVFNEVNS REMEKINVFS GIFSSWIFSA VAGATAVFQV IMVELLGTFA STVHLSGRLW
1001: LASVLIGSVS LVIGAVLKLI PVDSGSDVSS GRHDGYQPIP TGPNAV
Best Arabidopsis Sequence Match ( AT3G57330.1 )
(BLAST)
0001: MSNLLKDFEV ASKNPSLEAR QRWRSSVGLV KNRARRFRMI SNLDKLAENE KKRCQIQEKI RVVFYVQKAA FQFIDAGARP EYKLTDEVKK AGFYVEADEL
0101: ASMVRNHDTK SLTKIGGPEG IAQKVSVSLA EGVRSSELHI REKIYGENRY TEKPARSFLT FVWEALQDIT LIILMVCAVV SIGVGVATEG FPKGMYDGTG
0201: ILLSIILVVM VTAISDYKQS LQFRDLDREK KKIIIQVTRD GSRQEVSIHD LVVGDVVHLS IGDQVPADGI FISGYNLEID ESSLSGESEP SHVNKEKPFL
0301: LSGTKVQNGS AKMLVTTVGM RTEWGKLMDT LSEGGEDETP LQVKLNGVAT IIGKIGLGFA VLTFVVLCIR FVVEKATAGS ITEWSSEDAL TLLDYFAIAV
0401: TIIVVAVPEG LPLAVTLSLA FAMKQLMSDR ALVRHLAACE TMGSSTCICT DKTGTLTTNH MVVNKVWICE NIKERQEENF QLNLSEQVKN ILIQAIFQNT
0501: GSEVVKDKEG KTQILGSPTE RAILEFGLLL GGDVDTQRRE HKILKIEPFN SDKKKMSVLT SHSGGKVRAF CKGASEIVLK MCEKVVDSNG ESVPLSEEKI
0601: ASISDVIEGF ASEALRTLCL VYTDLDEAPR GDLPNGGYTL VAVVGIKDPV RPGVREAVQT CQAAGITVRM VTGDNISTAK AIAKECGILT AGGVAIEGSD
0701: FRNLPPHEMR AILPKIQVMA RSLPLDKHTL VNNLRKMGEV VAVTGDGTND APALHEADIG LAMGIAGTEV AKENADVIIM DDNFATIVNV AKWGRAVYIN
0801: IQKFVQFQLT VNVVALIINF VSACITGSAP LTAVQLLWVN MIMDTLGALA LATEPPNEGL MKRQPIGRTA SFITRAMWRN IIGQSIYQLI VLGILNFAGK
0901: QILNLNGPDS TIVLNTIIFN SFVFCQVFNE VNSREIEKIN VFEGMFKSWV FVAVMTATVG FQVIIVEFLG AFASTVPLSW QHWLLCILIG SVSMILAVGL
1001: KCIPVESNRH HDGYELLPSG PSDSA
Arabidopsis Description
ACA11Putative calcium-transporting ATPase 11, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9M2L4]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.