CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 3
golgi 2
extracellular 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
EpiLoc:	endoplasmic reticulum
MultiLoc:	golgi
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028687_P001	Maize	extracellular, mitochondrion	98.21	98.21
Zm00001d047769_P001	Maize	plasma membrane	97.83	97.74
Os03t0281600-01	Rice	plasma membrane	76.34	95.86
TraesCS4B01G201500.2	Wheat	golgi	92.84	92.75
TraesCS4D01G202200.2	Wheat	plasma membrane	92.74	92.66
TraesCS4A01G103000.2	Wheat	unclear	92.74	92.66
HORVU4Hr1G058210.4	Barley	plastid	89.63	87.81
CDY06279	Canola	plasma membrane	30.07	85.07
CDX95122	Canola	cytosol, plasma membrane, vacuole	23.66	82.03
EES18919	Sorghum	plasma membrane	79.36	79.58
GSMUA_Achr2P16100_001	Banana	plasma membrane	67.86	79.12
VIT_06s0004g03900.t01	Wine grape	plasma membrane	78.13	78.13
AT1G07810.1	Thale cress	plasma membrane	77.66	77.66
AT1G07670.2	Thale cress	plasma membrane	77.57	77.57
CDY06268	Canola	plasma membrane	74.55	77.55
VIT_08s0040g02830.t01	Wine grape	plasma membrane	77.66	77.52
CDY09907	Canola	plasma membrane	74.27	77.41
Bra031593.1-P	Field mustard	plasma membrane	77.19	77.26
KRG95874	Soybean	endoplasmic reticulum	76.91	76.98
Bra031583.1-P	Field mustard	plasma membrane	69.75	76.76
KRH67591	Soybean	endoplasmic reticulum	76.63	76.7
Solyc11g072880.1.1	Tomato	nucleus, plastid, unclear	75.78	75.78
PGSC0003DMT400040184	Potato	plasma membrane	75.4	75.4
CDY22720	Canola	peroxisome, plasma membrane	70.69	74.48
CDY28053	Canola	plasma membrane	76.06	74.17
CDY35928	Canola	plasma membrane	71.91	73.22
CDY68458	Canola	cytosol, peroxisome, plasma membrane	42.98	68.47
Bra029645.1-P	Field mustard	plasma membrane, plastid	76.81	68.26
CDY61305	Canola	cytosol	29.03	63.24
KXG37640	Sorghum	plasma membrane	44.58	47.3
KXG23838	Sorghum	plasma membrane	27.52	28.63
EER93815	Sorghum	plastid	27.52	28.27
EER91614	Sorghum	plasma membrane	26.77	28.06
EES16530	Sorghum	plasma membrane	27.33	27.97
EES15422	Sorghum	cytosol, endoplasmic reticulum, plasma membrane, plastid	26.86	27.91
EES12809	Sorghum	plasma membrane	28.46	27.66
EER95313	Sorghum	plasma membrane	26.48	27.55
KXG29596	Sorghum	cytosol, nucleus, plasma membrane	28.28	27.5
EER99121	Sorghum	cytosol, peroxisome, plasma membrane	27.52	27.16
EES07943	Sorghum	plasma membrane	26.48	27.1
EES15337	Sorghum	cytosol, nucleus, plasma membrane	27.71	27.05
EES18436	Sorghum	plasma membrane	26.48	26.97
OQU88174	Sorghum	cytosol, nucleus, plasma membrane	26.48	26.86

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:2.70.150.10	MapMan:24.1.2.2.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	EntrezGene:8084900
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
UniProt:C5WP97	ncoils:Coil	EnsemblPlants:EER92445	ProteinID:EER92445	ProteinID:EER92445.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
PFAM:PF00122	PFAM:PF00689	PFAM:PF00690	PFAM:PF12710	PFAM:PF13246	PRINTS:PR00119
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF3	InterPro:P_typ_ATPase	SMART:SM00831	EnsemblPlantsGene:SORBI_3001G413900
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81660	SUPFAM:SSF81665	unigene:Sbi.10595	TIGRFAMs:TIGR01494
TMHMM:TMhelix	UniParc:UPI0001A82C6C	RefSeq:XP_002465447.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:+:69584507..69589804

Molecular Weight (calculated)

115441.0 Da

IEP (calculated)

5.257

GRAVY (calculated)

0.092

Length

1061 amino acids

Sequence
(BLAST)

0001: MGKGGQDEGK RRDGSAASGP DPAEPAFPAW ARTPSECLAE LGVSADRGLS SEEAAARLQR YGPNELERHA PPSVWKLVLE QFNDTLVRIL LLAAVVSFVL
0101: ALYDGAEGGE VGVTAFVEPL VIFLILIVNA VVGVWQESNA EKALEALKEI QSEHATVKRD GRWSHGLPAR DLVPGDIVEL RVGDKVPADM RVLQLISSTL
0201: RVEQGSLTGE TASVNKTSHK IELEDTDIQG KECMVFAGTT VVNGSAVCVV TGTGMATEIG KIHAQIQEAS QEEDDTPLKK KLNEFGEALT AIIGVICALV
0301: WLINLKYFLS WEYVDGWPRN FKFSFEKCTY YFEIAVALAV AAIPEGLPAV ITTCLALGTR KMAQKNALVR KLPSVETLGC TTVICSDKTG TLTTNQMSAV
0401: KLVAIGRWPD TLRSFKVDGT TYDPTDGKIH DWPSLSMDEN LQMIAKIAAV CNDASIAHSE HQYVATGMPT EAALKVLVEK MGLPGGYTPS LDSSDLLRCC
0501: QWWNNAAKRV ATLEFDRTRK SMGVIVKVNS GKNLLLVKGA VENLLERCTH IQLLDGSVVL LDDGAKALIL STLRDMSASA LRCLGFAYKE ELAEFATYDG
0601: EEHAAHKYLL DPSYYSSIES NMIFCGFVGL RDPPREEVHR AIEDCRAAGI RVMVITGDNK ETAEAICREI GVFGPHEDIS SKSFTGKEFM ALSDKKKLLR
0701: QQGGLLFSRA EPKHKQEIVR LLKEDGEVVA MTGDGVNDAP ALKLADIGVA MGITGTEVAK EASDMVLADD NFSTIVAAVG EGRSIYNNMK AFIRYMISSN
0801: IGEVASIFLT SALGIPEGLI PVQLLWVNLV TDGPPATALG FNPPDKDIMK KPPRRSDDSL ITPWILFRYM VIGLYVGVAT VGIFIIWYTH GSFLGIDLAS
0901: DGHTLVSYSQ LSNWGQCSSW EGFKVSPFTA GARTFKFDAN PCDYFQGGKI KATTLSLSVL VSIEMFNSLN ALSEDGSLLS MPPWVNPWLL LAMSVSFGLH
1001: FLILYVPFLA QVFGIVPLSL NEWLLVIAVA FPVVLIDEVL KFVGRCLTAR ARKQSGKRKA E

Best Arabidopsis Sequence Match ( AT1G07670.1 )
(BLAST)

0001: MGKGGEDCGN KQTNSSELVK SDTFPAWGKD VSECEEKFGV SREKGLSTDE VLKRHQIYGL NELEKPEGTS IFKLILEQFN DTLVRILLAA AVISFVLAFF
0101: DGDEGGEMGI TAFVEPLVIF LILIVNAIVG IWQETNAEKA LEALKEIQSQ QATVMRDGTK VSSLPAKELV PGDIVELRVG DKVPADMRVV ALISSTLRVE
0201: QGSLTGESEA VSKTTKHVDE NADIQGKKCM VFAGTTVVNG NCICLVTDTG MNTEIGRVHS QIQEAAQHEE DTPLKKKLNE FGEVLTMIIG LICALVWLIN
0301: VKYFLSWEYV DGWPRNFKFS FEKCTYYFEI AVALAVAAIP EGLPAVITTC LALGTRKMAQ KNALVRKLPS VETLGCTTVI CSDKTGTLTT NQMAVSKLVA
0401: MGSRIGTLRS FNVEGTSFDP RDGKIEDWPT GRMDANLQMI AKIAAICNDA NVEKSDQQFV SRGMPTEAAL KVLVEKMGFP EGLNEASSDG NVLRCCRLWS
0501: ELEQRIATLE FDRDRKSMGV MVDSSSGKKL LLVKGAVENV LERSTHIQLL DGSTRELDQY SRDLILQSLH DMSLSALRCL GFAYSDVPSD FATYDGSEDH
0601: PAHQQLLNPS NYSSIESNLV FVGFVGLRDP PRKEVRQAIA DCRTAGIRVM VITGDNKSTA EAICREIGVF EADEDISSRS LTGKEFMDVK DQKNHLRQTG
0701: GLLFSRAEPK HKQEIVRLLK EDGEVVAMTG DGVNDAPALK LADIGVAMGI SGTEVAKEAS DLVLADDNFS TIVAAVGEGR SIYNNMKAFI RYMISSNIGE
0801: VASIFLTAAL GIPEGMIPVQ LLWVNLVTDG PPATALGFNP PDKDIMKKPP RRSDDSLITA WILFRYMVIG LYVGVATVGV FIIWYTHNSF MGIDLSQDGH
0901: SLVSYSQLAH WGQCSSWEGF KVSPFTAGSQ TFSFDSNPCD YFQQGKIKAS TLSLSVLVAI EMFNSLNALS EDGSLVTMPP WVNPWLLLAM AVSFGLHFVI
1001: LYVPFLAQVF GIVPLSLNEW LLVLAVSLPV ILIDEVLKFV GRCTSGYRYS PRTPSAKQKE E

Arabidopsis Description

ECA4Calcium-transporting ATPase 4, endoplasmic reticulum-type [Source:UniProtKB/Swiss-Prot;Acc:Q9XES1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.