CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013942.1-P	Field mustard	cytosol	92.42	16.76
CDY53835	Canola	nucleus, plasma membrane, plastid	31.82	6.82
CDX94389	Canola	plasma membrane	98.48	6.34
CDX89375	Canola	plasma membrane	95.45	6.11
CDY19574	Canola	plasma membrane	54.55	5.98
CDX94386	Canola	cytosol	78.79	4.94
CDY38719	Canola	plasma membrane	56.06	3.87
CDY38720	Canola	plasma membrane	53.03	3.67
CDY20693	Canola	cytosol	54.55	3.36
CDY38264	Canola	plasma membrane	54.55	3.36
CDY68458	Canola	cytosol, peroxisome, plasma membrane	33.33	3.3
CDY32412	Canola	plasma membrane	54.55	3.3
CDX82212	Canola	plasma membrane	54.55	3.3
CDY37311	Canola	plasma membrane	54.55	3.3
CDY27537	Canola	plasma membrane	54.55	3.3
CDY30184	Canola	plasma membrane	53.03	3.3
CDY50072	Canola	plasma membrane	54.55	3.29
CDY19575	Canola	plasma membrane	54.55	3.29
CDY46716	Canola	cytosol	53.03	3.26
CDX68595	Canola	plasma membrane	51.52	3.21
CDY32902	Canola	plasma membrane	54.55	3.21
CDY43534	Canola	cytosol	51.52	3.21
CDY53981	Canola	cytosol	54.55	3.11
CDY10680	Canola	plasma membrane	45.45	2.96
CDY10319	Canola	plasma membrane	45.45	2.93
CDY40822	Canola	plasma membrane	42.42	2.76
CDY34219	Canola	plasma membrane	42.42	2.75
CDY06114	Canola	plasma membrane	42.42	2.73
CDX90109	Canola	plasma membrane	40.91	2.65
CDY11764	Canola	plasma membrane	40.91	2.65
CDX72049	Canola	plasma membrane	40.91	2.63
CDX93910	Canola	plasma membrane	40.91	2.61
CDX76883	Canola	plasma membrane	39.39	2.56
CDY49443	Canola	plasma membrane	39.39	2.56
CDY33829	Canola	plasma membrane	39.39	2.54
CDX67686	Canola	cytosol, peroxisome, plasma membrane, plastid	39.39	2.54
CDX94924	Canola	plasma membrane	31.82	2.53
CDY07153	Canola	plasma membrane	39.39	2.47
CDY51719	Canola	plasma membrane	39.39	2.47
CDX72644	Canola	plasma membrane	37.88	2.47
CDY22420	Canola	plasma membrane	37.88	2.46
CDY44033	Canola	plasma membrane	37.88	2.45
CDY29571	Canola	plasma membrane	36.36	2.37
CDY06915	Canola	plasma membrane	36.36	2.33
CDY14779	Canola	plasma membrane	34.85	2.32
CDY22604	Canola	plasma membrane	33.33	2.2
CDY22720	Canola	peroxisome, plasma membrane	33.33	2.18
CDY09907	Canola	plasma membrane	33.33	2.16
CDY06268	Canola	plasma membrane	33.33	2.16
CDX89371	Canola	plasma membrane	10.61	2.08
CDX93457	Canola	cytosol, nucleus, plasma membrane	33.33	1.83
CDY35928	Canola	plasma membrane	18.18	1.15
CDY28053	Canola	plasma membrane	18.18	1.1
CDX95120	Canola	mitochondrion	0.0	0.0
CDX95122	Canola	cytosol, plasma membrane, vacuole	0.0	0.0
CDY61305	Canola	cytosol	0.0	0.0
CDY65295	Canola	cytosol	0.0	0.0
CDY06279	Canola	plasma membrane	0.0	0.0
CDY70305	Canola	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY65296	EnsemblPlantsGene:GSBRNA2T00045554001	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	GO:A0A078JHX1	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	PANTHER:PTHR24093	PANTHER:PTHR24093:SF368	ProteinID:CDY65296	ProteinID:CDY65296.1	SUPFAM:SSF56784
UniParc:UPI0004EE41E1	UniProt:A0A078JHX1	MapMan:35.2	:	:	:

Description

BnaC01g41580DBnaC01g41580D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JHX1]

Coordinates

chrLK034722:-:25343..25878

Molecular Weight (calculated)

7127.7 Da

IEP (calculated)

6.384

GRAVY (calculated)

-0.017

Length

66 amino acids

Sequence
(BLAST)

1: DEMSKEGLRC AALAYRKFTD GDIPESNLVL LAIIGIKDSC RPGISRAIQQ CRNAGVKVCM VTGDDL

Best Arabidopsis Sequence Match ( AT5G53010.1 )
(BLAST)

0001: MVVFNLSMFR FWKRPSPNVG PGDLEIGLGG GYSSSLADDD VVIPHPPVAE DVPSELEAGI DPEAALENIA PHDLEAGHVT THRWRRVRTL KRASVAFYQV
0101: VICQMLRRNR TGTVPDQALV HDDHQETEQS SNEASTSGGF GIGVEELVQL VKERSLEALN RYNGVHGLSN LLKTDLKVGI DRRDDEILLR RNAYGSNTYP
0201: CKKGKTFWYF LWRASQFSHL LVIMFAAVFF SLLRIKTKGI LDGWYIEACI VLVTVFHIIA IAVAEYKQSC RFIKLTEEKR TVYLEVIRGG RRVRVSIYDI
0301: VVGDIVPLKN GCQVPADGVL FVANSLKVAE QEVTASDEIV QKDLQTNPFL LSGSKLIEGI GTMLVTSVGM NTEWGLKMEV SQKTDEEKPF QGYLKWLAIS
0401: ASWFVVLFAS VACSIQVGGS SAPSWQGPNN RFISRYFSGV TKKSDGTPMF IYGITTADEA IEFVITSLSF GIATIVVAVP VGLSIAVRLN FAKTTKKMRK
0501: DKVLMSVVDV WAGGIRMQDM DDVSQLPTFL KELIIEGIAQ NTNGSVVFET GVTEPEVYGS PTEQAILNFG NKLGMKFDDA RSASLVRHTI PFNPKKKYGG
0601: VALQLGTHAH VHWKGSAKTI LSSCEGYMDG ANNSRAINEQ KRKSFEGTIE NMSKEGLRCA ALAYQPCELG SLPTITEPRN LVLLAIVGIK DPCRPGTRDA
0701: IQLCNSGSVK VCMVTDNDGL TAQAIAIECG ILTDASGRNI RTGAQFRELS DLEREQIAGD ILVFAQSSPN DNLLLVQALK KRGHIVAATG MGIHDPKTLR
0801: EADVSLAMGV GGTAAAKENS DFIILDDNFA TIVKCIIWSR SLYNNVQKSI LFRLTVSVSA LAVCVVEVVV YDAFPLNAVQ FLLVNLIIDI LGALALAYRP
0901: RSDHHLMGKP PVGIRDPLIT KTMWSKMIIQ VFYLVLSLVL INSEKLLKLK HGQTGNAEKM MNTLIFNSFV FYLVFNEFEI QSVDQTFKEV LRENMFLVTI
1001: TSTIISQIIV IKFAGIFIDL KKWVTTSLLG LLSQVATRYP YPAIQYHRN

Arabidopsis Description

Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:F4KHQ2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.