Factsheet for TraesCS6D01G142400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G180700.3	Wheat	cytosol, nucleus, plasma membrane	99.45	99.09
TraesCS6A01G152700.2	Wheat	cytosol	98.72	98.63
HORVU6Hr1G030590.16	Barley	cytosol, nucleus, plasma membrane	96.98	96.98
KXG29596	Sorghum	cytosol, nucleus, plasma membrane	87.28	87.44
Os02t0176700-00	Rice	plasma membrane	73.47	87.0
Zm00001d015446_P016	Maize	plasma membrane	80.24	78.02
GSMUA_Achr1P23580_001	Banana	plasma membrane	72.19	73.12
TraesCS2D01G430700.1	Wheat	plasma membrane	71.82	72.75
VIT_11s0052g00320.t01	Wine grape	plasma membrane	70.54	71.39
KRH47020	Soybean	golgi, plasma membrane	47.58	70.56
Solyc07g008320.2.1	Tomato	nucleus	69.72	70.49
KRH12351	Soybean	cytosol, nucleus, peroxisome	69.26	69.96
KRH37353	Soybean	plasma membrane	68.89	69.4
KRH09610	Soybean	plasma membrane	69.08	69.2
GSMUA_AchrUn_...	Banana	plasma membrane	55.81	69.0
KRH44631	Soybean	nucleus	68.89	68.96
AT5G57110.2	Thale cress	plasma membrane	67.25	68.44
CDY20693	Canola	cytosol	66.97	68.41
Solyc03g123890.2.1	Tomato	plasma membrane	65.42	68.29
KRH23705	Soybean	nucleus, plastid	68.8	68.18
CDY38264	Canola	plasma membrane	66.88	68.13
Bra002762.1-P	Field mustard	plasma membrane	66.79	68.03
TraesCS7D01G252900.4	Wheat	cytosol	67.34	67.96
CDX68595	Canola	plasma membrane	65.78	67.96
Bra035649.1-P	Field mustard	cytosol	66.88	67.94
CDY43534	Canola	cytosol	65.87	67.92
GSMUA_AchrUn_...	Banana	plasma membrane	71.45	67.91
CDY19574	Canola	plasma membrane	37.33	67.77
KRH02761	Soybean	cytosol, nucleus, peroxisome	66.7	67.63
Bra024117.1-P	Field mustard	plasma membrane	65.6	67.58
CDY46716	Canola	cytosol	66.33	67.57
CDY30184	Canola	plasma membrane	65.6	67.51
TraesCS5D01G284100.3	Wheat	plasma membrane	66.33	67.44
KRH19116	Soybean	cytosol	66.24	67.41
AT4G29900.1	Thale cress	plasma membrane	65.78	67.26
Bra011144.1-P	Field mustard	cytosol	65.69	67.17
AT3G21180.1	Thale cress	cytosol, plasma membrane, plastid	66.42	66.85
CDY19575	Canola	plasma membrane	66.79	66.67
Bra031259.1-P	Field mustard	plasma membrane	66.7	66.58
CDY50072	Canola	plasma membrane	66.7	66.58
CDY37311	Canola	plasma membrane	66.33	66.45
CDX82212	Canola	plasma membrane	66.24	66.42
CDY32412	Canola	plasma membrane	66.24	66.42
CDY27537	Canola	plasma membrane	66.24	66.3
VIT_09s0018g02130.t01	Wine grape	plasma membrane	68.8	66.26
Bra023899.1-P	Field mustard	plasma membrane	66.42	66.24
CDY32902	Canola	plasma membrane	66.79	65.06
KRH47024	Soybean	cytosol, nucleus, plasma membrane	20.68	64.02
GSMUA_Achr4P05790_001	Banana	plasma membrane, plastid	66.88	63.51
CDY53981	Canola	cytosol	66.61	62.87
TraesCS1D01G335400.1	Wheat	plastid	46.39	49.71
TraesCS1D01G335500.1	Wheat	plastid	46.02	49.46
TraesCS1D01G066500.1	Wheat	mitochondrion	37.97	49.17
TraesCS5D01G080700.1	Wheat	plasma membrane	45.29	48.53
TraesCS4D01G257900.1	Wheat	plasma membrane	45.01	48.24
TraesCS5D01G142900.2	Wheat	plasma membrane	45.38	47.88
TraesCS3D01G470100.1	Wheat	plasma membrane	43.64	45.73
TraesCS1D01G312500.1	Wheat	plasma membrane	42.45	44.53
TraesCS4D01G079200.1	Wheat	plasma membrane	42.36	44.1
TraesCS1D01G047900.1	Wheat	plasma membrane	25.89	26.85
TraesCS4D01G202200.2	Wheat	plasma membrane	26.07	26.84
TraesCS4D01G060900.1	Wheat	plasma membrane	24.15	26.4
TraesCS4D01G079100.1	Wheat	nucleus	0.82	1.38

Protein Annotations

Gene3D:1.20.1110.10	Gene3D:1.20.5.170	Gene3D:2.70.150.10	MapMan:24.1.2.2.2	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_C	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
InterPro:Ca_ATPase_N_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005388
GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0070588	InterPro:HAD-like_sf
InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	InterPro:P-type_ATPase_IIB	PFAM:PF00122	PFAM:PF00689
PFAM:PF00690	PFAM:PF00702	PFAM:PF12515	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
PANTHER:PTHR24093	PANTHER:PTHR24093:SF416	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653
SUPFAM:SSF81660	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01517	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G142400
EnsemblPlants:TraesCS6D01G142400.1	TIGR:cd02081	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:+:112454253..112470661

Molecular Weight (calculated)

119319.0 Da

IEP (calculated)

6.893

GRAVY (calculated)

0.077

Length

1093 amino acids

Sequence
(BLAST)

0001: MPAGGVGVQA PEASPGRYVR RVDEVPPDDD GCDGVFGVDV RGPGDNDPFD IPAKRAPVER LRRWRQAALV LNASRRFRYT LDLKKEEEKE QIRRKIRAHA
0101: QVIRAALLFK EAGEKQNGDT ELPEILPRGF GIGEDQLTSM TRDHNYSALQ EYGGVKGLTN LLKTNPEKGI HGDEADLSCR ANAFGANRYP RKKGKSFWVF
0201: LWEACKDLTL VILIVAAAIS LVLGIATEGI KEGWYDGASI AFAVFLVILV TAVSDYKQSL QFQHLNEEKQ NIQVEVIRGG RRIQVSIFDI VVGDVVALKI
0301: GDQVPADGIL ISGHSLAIDE SSMTGESKIV LKDQNSPFLM GGCKVADGYG TMLVTAVGLN TEWGLLMASI SEDNNEETPL QVRLNGVATF IGIVGLVVAA
0401: MVLVVLFARY FTGHTTNPDG TVQFVKGRTG VKSTIFGVIK ILTVAVTIVV VAVPEGLPLA VTLTLAYSMR KMMADKALVR RLSACETMGS ATTICSDKTG
0501: TLTLNQMTVV RSIVGAIELQ PQATIDKLSH TVTSLVLEAI AQNTSGSVFE PEDGSTVEVT GSPTEKAILS WGLELHMKFA VERSKSAIIH VSPFNSEKKR
0601: GGVAVIGRDS DVHVHWKGAA EIVLALCTNW LDVDGSTHEM TPDKANHFRK YIEDMAEQSL RCVAFAYRNL DPKDIPSEEQ RINWELPDND LTLIGIVGMK
0701: DPCRPGVRDA VELCTNSGVK VRMVTGDNLQ TARAIALECG ILTDPQASAP VIIEGKVFRA YSDAEREAVA DKISVMGRSS PNDKLLLVKA LKKNGHVVAV
0801: TGDGTNDAPA LHEADIGLSM GIQGTEVAKE SSDIIILDDN FASVVKVVRW GRSVYANIQK FIQFQLTVNV AALIINVVAA ISSGNVPLNA VQLLWVNLIM
0901: DTLGALALAT EPPTDQLMKR TPVGRREPLV TNIMWRNLFI QAVYQVAVLL TLNFRGRDLL HLTQDTLEHS SKVKNSFIFN TFVLCQVFNE FNARKPEELN
1001: IFEGVSRNHL FLAVVSVTVV LQVIIIEFLG KFTSTVRLSW QLWLVSLAIA FISWPLALVG KFIPVPQTPL KNLILKCWPK KKKQGDEGAA PPV

Best Arabidopsis Sequence Match ( AT5G57110.2 )
(BLAST)

0001: MTSLLKSSPG RRRGGDVESG KSEHADSDSD TFYIPSKNAS IERLQQWRKA ALVLNASRRF RYTLDLKKEQ ETREMRQKIR SHAHALLAAN RFMDMGRESG
0101: VEKTTGPATP AGDFGITPEQ LVIMSKDHNS GALEQYGGTQ GLANLLKTNP EKGISGDDDD LLKRKTIYGS NTYPRKKGKG FLRFLWDACH DLTLIILMVA
0201: AVASLALGIK TEGIKEGWYD GGSIAFAVIL VIVVTAVSDY KQSLQFQNLN DEKRNIHLEV LRGGRRVEIS IYDIVVGDVI PLNIGNQVPA DGVLISGHSL
0301: ALDESSMTGE SKIVNKDANK DPFLMSGCKV ADGNGSMLVT GVGVNTEWGL LMASISEDNG EETPLQVRLN GVATFIGSIG LAVAAAVLVI LLTRYFTGHT
0401: KDNNGGPQFV KGKTKVGHVI DDVVKVLTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN QMTVVESYAG
0501: GKKTDTEQLP ATITSLVVEG ISQNTTGSIF VPEGGGDLEY SGSPTEKAIL GWGVKLGMNF ETARSQSSIL HAFPFNSEKK RGGVAVKTAD GEVHVHWKGA
0601: SEIVLASCRS YIDEDGNVAP MTDDKASFFK NGINDMAGRT LRCVALAFRT YEAEKVPTGE ELSKWVLPED DLILLAIVGI KDPCRPGVKD SVVLCQNAGV
0701: KVRMVTGDNV QTARAIALEC GILSSDADLS EPTLIEGKSF REMTDAERDK ISDKISVMGR SSPNDKLLLV QSLRRQGHVV AVTGDGTNDA PALHEADIGL
0801: AMGIAGTEVA KESSDIIILD DNFASVVKVV RWGRSVYANI QKFIQFQLTV NVAALVINVV AAISSGDVPL TAVQLLWVNL IMDTLGALAL ATEPPTDHLM
0901: GRPPVGRKEP LITNIMWRNL LIQAIYQVSV LLTLNFRGIS ILGLEHEVHE HATRVKNTII FNAFVLCQAF NEFNARKPDE KNIFKGVIKN RLFMGIIVIT
1001: LVLQVIIVEF LGKFASTTKL NWKQWLICVG IGVISWPLAL VGKFIPVPAA PISNKLKVLK FWGKKKNSSG EGSL

Arabidopsis Description

ACA8Calcium-transporting ATPase [Source:UniProtKB/TrEMBL;Acc:Q0WV19]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.