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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • endoplasmic reticulum 1
  • nucleus 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, endoplasmic reticulum, mitochondrion, nucleus, plasma membrane
BaCelLo:cytosol
EpiLoc:endoplasmic reticulum
MultiLoc:nucleus
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 plasma membrane: 18260611
plasma membrane: 27800704
plasma membrane: 28056797
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G152700.2 Wheat cytosol 87.22 73.58
TraesCS6D01G142400.1 Wheat cytosol, nucleus, plasma membrane 87.0 73.47
HORVU6Hr1G030590.16 Barley cytosol, nucleus, plasma membrane 86.78 73.28
TraesCS6B01G180700.3 Wheat cytosol, nucleus, plasma membrane 86.89 73.11
KXG29596 Sorghum cytosol, nucleus, plasma membrane 84.83 71.77
Zm00001d015446_P016 Maize plasma membrane 78.01 64.06
GSMUA_Achr1P23580_001 Banana plasma membrane 73.13 62.56
GSMUA_AchrUn_... Banana plasma membrane 58.29 60.86
VIT_11s0052g00320.t01 Wine grape plasma membrane 70.64 60.37
Os04t0605500-02 Rice plasma membrane 71.07 60.29
Solyc07g008320.2.1 Tomato nucleus 69.88 59.67
KRH12351 Soybean cytosol, nucleus, peroxisome 69.66 59.43
KRH44631 Soybean nucleus 70.21 59.34
CDY19574 Canola plasma membrane 38.68 59.3
KRH47020 Soybean golgi, plasma membrane 47.35 59.29
KRH37353 Soybean plasma membrane 69.56 59.17
Os08t0517200-02 Rice plasma membrane 33.04 58.99
KRH09610 Soybean plasma membrane 69.66 58.94
CDY20693 Canola cytosol 67.82 58.5
GSMUA_AchrUn_... Banana plasma membrane 72.81 58.43
CDY38264 Canola plasma membrane 67.93 58.43
Bra002762.1-P Field mustard plasma membrane 67.82 58.34
KRH23705 Soybean nucleus, plastid 69.56 58.2
AT5G57110.2 Thale cress plasma membrane 67.61 58.1
Bra035649.1-P Field mustard cytosol 67.71 58.09
Solyc03g123890.2.1 Tomato plasma membrane 65.87 58.07
CDX68595 Canola plasma membrane 65.87 57.47
AT4G29900.1 Thale cress plasma membrane 66.52 57.44
AT3G21180.1 Thale cress cytosol, plasma membrane, plastid 67.5 57.37
CDY43534 Canola cytosol 65.76 57.26
KRH02761 Soybean cytosol, nucleus, peroxisome 66.74 57.14
CDY46716 Canola cytosol 66.31 57.04
CDX82212 Canola plasma membrane 67.28 56.97
KRH47024 Soybean cytosol, nucleus, plasma membrane 21.78 56.94
Bra024117.1-P Field mustard plasma membrane 65.44 56.93
CDY37311 Canola plasma membrane 67.28 56.92
CDY32412 Canola plasma membrane 67.17 56.88
CDY30184 Canola plasma membrane 65.44 56.87
CDY27537 Canola plasma membrane 67.17 56.78
CDY19575 Canola plasma membrane 67.28 56.71
Bra011144.1-P Field mustard cytosol 65.66 56.69
Bra023899.1-P Field mustard plasma membrane 67.28 56.66
Bra031259.1-P Field mustard plasma membrane 67.06 56.53
CDY50072 Canola plasma membrane 66.96 56.44
VIT_09s0018g02130.t01 Wine grape plasma membrane 69.34 56.39
KRH19116 Soybean cytosol 65.55 56.33
GSMUA_Achr4P05790_001 Banana plasma membrane, plastid 69.99 56.13
CDY32902 Canola plasma membrane 67.5 55.53
CDY53981 Canola cytosol 67.71 53.97
Os11t0140400-01 Rice cytosol 41.82 42.98
Os10t0418100-01 Rice golgi 47.89 42.71
Os03t0203700-01 Rice plasma membrane 47.13 42.69
Os12t0586600-01 Rice plasma membrane 46.7 42.25
Os12t0136900-00 Rice plasma membrane 45.5 40.42
Os01t0939100-01 Rice plasma membrane 45.61 40.36
Os03t0616400-01 Rice plastid 43.34 38.72
Os05t0495600-00 Rice plasma membrane 43.01 37.56
Os03t0281600-01 Rice plasma membrane 25.14 27.46
Os03t0730800-01 Rice plasma membrane 15.71 22.66
Os05t0120700-01 Rice plasma membrane 4.98 16.37
Protein Annotations
Gene3D:1.20.1110.10Gene3D:1.20.5.170Gene3D:2.70.150.10MapMan:24.1.2.2.2Gene3D:3.40.1110.10Gene3D:3.40.50.1000
UniProt:A0A0P0VFR4InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_CInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sfProteinID:BAS77262.1InterPro:Ca_ATPase_N_domGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005388GO:GO:0005488GO:GO:0005515GO:GO:0005516GO:GO:0005524
GO:GO:0005575GO:GO:0006810GO:GO:0006811GO:GO:0006816GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0016787GO:GO:0070588GO:GO:0099132InterPro:HAD-like_sfInterPro:HAD_sf
InterPro:IPR023214InterPro:IPR023299EnsemblPlantsGene:Os02g0176700EnsemblPlants:Os02t0176700-00InterPro:P-type_ATPase_IIBPFAM:PF00122
PFAM:PF00689PFAM:PF00690PFAM:PF00702PFAM:PF12515PRINTS:PR00119PRINTS:PR00120
ScanProsite:PS00154PANTHER:PTHR24093PANTHER:PTHR24093:SF421InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784
SUPFAM:SSF81653SUPFAM:SSF81660SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01517TMHMM:TMhelix
UniParc:UPI000393AC1DSEG:seg::::
Description
CA2+-ATPASE 9Similar to autoinhibited calcium ATPase. (Os02t0176700-00)
Coordinates
chr2:-:4196026..4208370
Molecular Weight (calculated)
100525.0 Da
IEP (calculated)
6.523
GRAVY (calculated)
0.038
Length
923 amino acids
Sequence
(BLAST)
001: MPVGVQAPEA SPGRYHRRRD DDDGNGNDCS DVLGVDVLDE GADPFDIPAK RASVERLRRW RQAALVLNAS RRFRYTLDLK KEEEKEQIRR KIRAHAQVIR
101: VKGLANLLKT NTEKGVHGDE VDLACRANAF GANRYPRKKG RSFLVFLWEA CQDLTLVILI IAAVISLVLG IATEGIKEGW YDGASIAFAV FLVILVTAVS
201: DYKQSLQFQH LNEEKQNIQV EVIRGGRRIE VSIFDIVVGD VVALKIGDQV PADGVLVSGH SLAIDESSMT GESKIVVKDH KSPFLMGGCK VADGYGTMLV
301: TAVGLNTEWG LLMASISEDN NEETPLQVRL NGVATFIGIV GLSVAAMVLI VLVARLAYSM QKMMADKALV RRLSACETMG SATTICSDKT GTLTLNQMTV
401: VRSVVGGIKL KSPADIENLS PVVSSLILEG IAQNSSGSVF EPEDGSPIEI TGSPTEKAIL SWGVELHMKF AEEKSKSSII HVSPFNSEKK RAGVAVIVDD
501: SDIHVHWKGA AEIVLALCTN WLDVNGISHE MTPDKANQFK KYIEEMAEES LRCVAFAYRN LDLNYVPNEE ERINWELPDN ELALIGIVGM KDPCRPGVRN
601: AVDLCKNAGV KVRMVTGDNL QTARAIALEC GILTDSQASQ PVIIEGKVFR AYSDAEREAV ADQISVMGRS SPSDKLLLVK ALKKKGNVVA VTGDGTNDAP
701: ALHEADIGLA MGIQGTEVAK ESSDIIILDD NFASVVKVVR WGRSVYANIQ KFIQFQLTVN VAALIINVVA AISSGNVPLN AVQLLWVNLI MDTLGALALA
801: TEPPTDQLMK RPPVGRKGRD LLHLTQDTLD HANKVKNTFI FNTFVLCQVI IIEFLGKFTS TVRLSWKLWL VSVGIGFVSW PLAFAGKFIP VPRTELKTYI
901: SRCLPGKKDN EGSTPPPPPP PPV
Best Arabidopsis Sequence Match ( AT4G29900.1 )
(BLAST)
0001: MSGQFNNSPR GEDKDVEAGT SSFTEYEDSP FDIASTKNAP VERLRRWRQA ALVLNASRRF RYTLDLKREE DKKQMLRKMR AHAQAIRAAH LFKAAASRVT
0101: GIASPLPTPG GGDFGIGQEQ IVSISRDQNI GALQELGGVR GLSDLLKTNL EKGIHGDDDD ILKRKSAFGS NTYPQKKGRS FWRFVWEASQ DLTLIILIVA
0201: AVASLALGIK TEGIEKGWYD GISIAFAVLL VIVVTATSDY RQSLQFQNLN EEKRNIRLEV TRDGRRVEIS IYDIVVGDVI PLNIGDQVPA DGVLVAGHSL
0301: AVDESSMTGE SKIVQKNSTK HPFLMSGCKV ADGNGTMLVT GVGVNTEWGL LMASVSEDNG GETPLQVRLN GVATFIGIVG LTVAGVVLFV LVVRYFTGHT
0401: KNEQGGPQFI GGKTKFEHVL DDLVEIFTVA VTIVVVAVPE GLPLAVTLTL AYSMRKMMAD KALVRRLSAC ETMGSATTIC SDKTGTLTLN EMTVVECYAG
0501: LQKMDSPDSS SKLPSAFTSI LVEGIAHNTT GSVFRSESGE IQVSGSPTER AILNWAIKLG MDFDALKSES SAVQFFPFNS EKKRGGVAVK SPDSSVHIHW
0601: KGAAEIVLGS CTHYMDESES FVDMSEDKMG GLKDAIDDMA ARSLRCVAIA FRTFEADKIP TDEEQLSRWE LPEDDLILLA IVGIKDPCRP GVKNSVLLCQ
0701: QAGVKVRMVT GDNIQTAKAI ALECGILASD SDASEPNLIE GKVFRSYSEE ERDRICEEIS VMGRSSPNDK LLLVQSLKRR GHVVAVTGDG TNDAPALHEA
0801: DIGLAMGIQG TEVAKEKSDI IILDDNFESV VKVVRWGRSV YANIQKFIQF QLTVNVAALV INVVAAISAG EVPLTAVQLL WVNLIMDTLG ALALATEPPT
0901: DHLMDRAPVG RREPLITNIM WRNLFIQAMY QVTVLLILNF RGISILHLKS KPNAERVKNT VIFNAFVICQ VFNEFNARKP DEINIFRGVL RNHLFVGIIS
1001: ITIVLQVVIV EFLGTFASTT KLDWEMWLVC IGIGSISWPL AVIGKLIPVP ETPVSQYFRI NRWRRNSSG
Arabidopsis Description
ACA10Calcium-transporting ATPase 10, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SZR1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.