Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d030290_P001 | Maize | cytosol | 46.3 | 43.35 |
| Os03t0243300-01 | Rice | plasma membrane | 49.38 | 39.8 |
| EER91744 | Sorghum | mitochondrion | 43.83 | 35.5 |
| CDX94347 | Canola | cytosol | 18.21 | 32.96 |
Protein Annotations
| MapMan:19.2.6.2.2.9 | Gene3D:3.40.50.410 | UniProt:A0A0P0XRM8 | ProteinID:BAT09848.1 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008540 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0019538 |
| GO:GO:0031593 | GO:GO:0043161 | GO:GO:0043248 | InterPro:IPR002035 | InterPro:IPR036465 | EnsemblPlantsGene:Os10g0141400 |
| EnsemblPlants:Os10t0141400-00 | PFAM:PF13519 | PFscan:PS50234 | PANTHER:PTHR10223 | PANTHER:PTHR10223:SF0 | InterPro:Proteasome_su_Rpn10 |
| SMART:SM00327 | SUPFAM:SSF53300 | UniParc:UPI000393AF16 | InterPro:VWF_A | SEG:seg | InterPro:vWFA_dom_sf |
Description
Similar to 26S proteasome non-ATPase regulatory subunit 4. (Os10t0141400-00)
Coordinates
chr10:-:2528896..2531384
Molecular Weight (calculated)
35032.9 Da
IEP (calculated)
4.236
GRAVY (calculated)
-0.307
Length
324 amino acids
Sequence
(BLAST)
(BLAST)
001: RVLESRAVQA TVICVDDSEW MRNGDYPPTR LQAQEDAANL VVGTKMTSNP ENTVGVLAMA GDRVRVLLAP TSDPVKFLAC MHGLEASGEA NLTATLNIAE
101: LVLKNRPDKR LSQRIVVFVG SPVKDEKLET IGKKLKKYNV SLDVVEFGES DDEKPEKLEA LVAAVGGSSH IVHIPPGEDL RAVLANTPII TGDEGGGAAA
201: GGASRYEYNV DPNVDPEFAE ALRLSEIARQ EAAADGASRY EYSVDPNADP ELAETFRLAA GEPSTSNTDT VLLESDSDTY VPFHEFIQNN PFVTGAESAS
301: DRPADDERAT VCYYVSMLQC YYPY
101: LVLKNRPDKR LSQRIVVFVG SPVKDEKLET IGKKLKKYNV SLDVVEFGES DDEKPEKLEA LVAAVGGSSH IVHIPPGEDL RAVLANTPII TGDEGGGAAA
201: GGASRYEYNV DPNVDPEFAE ALRLSEIARQ EAAADGASRY EYSVDPNADP ELAETFRLAA GEPSTSNTDT VLLESDSDTY VPFHEFIQNN PFVTGAESAS
301: DRPADDERAT VCYYVSMLQC YYPY
001: MVLEATMICI DNSEWMRNGD YSPSRLQAQT EAVNLLCGAK TQSNPENTVG ILTMAGKGVR VLTTPTSDLG KILACMHGLD VGGEINLTAA IQIAQLALKH
101: RQNKNQRQRI IVFAGSPIKY EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA LSDVLLSTPV FTGDEGASGY
201: VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM
301: SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL LASLPDESKR TEEEESSSKK GEDEKK
101: RQNKNQRQRI IVFAGSPIKY EKKALEIVGK RLKKNSVSLD IVNFGEDDDE EKPQKLEALL TAVNNNDGSH IVHVPSGANA LSDVLLSTPV FTGDEGASGY
201: VSAAAAAAAA GGDFDFGVDP NIDPELALAL RVSMEEERAR QEAAAKKAAD EAGQKDKDGD TASASQETVA RTTDKNAEPM DEDSALLDQA IAMSVGDVNM
301: SEAADEDQDL ALALQMSMSG EESSEATGAG NNLLGNQAFI SSVLSSLPGV DPNDPAVKEL LASLPDESKR TEEEESSSKK GEDEKK
Arabidopsis Description
RPN10RPN10 [Source:UniProtKB/TrEMBL;Acc:A0A178V4I4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.