Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os10t0404300-00 | Rice | plastid | 50.49 | 56.04 |
| GSMUA_Achr4P00530_001 | Banana | mitochondrion | 47.52 | 52.17 |
| Os03t0171300-01 | Rice | nucleus | 45.54 | 50.0 |
| Os04t0641700-00 | Rice | mitochondrion | 48.51 | 47.12 |
| Os03t0171700-01 | Rice | nucleus | 41.58 | 46.15 |
| Os06t0226500-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 39.6 | 45.98 |
| Os10t0403800-00 | Rice | nucleus | 38.61 | 44.32 |
| Os02t0747900-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 37.62 | 43.18 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:4350872 | ProteinID:ABA94608.1 | EMBL:AK111303 | ProteinID:BAF28599.1 |
| ProteinID:BAT14773.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0040007 | GO:GO:0040008 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlantsGene:Os11g0603000 | EnsemblPlants:Os11t0603000-01 | PFAM:PF00010 | PANTHER:PTHR38546 | UniProt:Q2R1J3 | SUPFAM:SSF47459 |
| UniParc:UPI0000681EF0 | RefSeq:XP_015616700.1 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
INCREASED LEAF INCLINATION 2Basic helix-loop-helix dimerisation region bHLH domain containing protein. (Os11t0603000-01)
Coordinates
chr11:+:23222907..23224222
Molecular Weight (calculated)
10996.2 Da
IEP (calculated)
7.366
GRAVY (calculated)
-0.274
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSRRSRTS SRLAAAPPPT DEQMAELISK LQAVLPTRGG EANAKQASSA EVLQEACRYI RRLHREADAL SERLAELLLL QPSDLAINGA DVPDLIRSLL
101: M
101: M
1: MSNRRSRQSS SAPRISDNQM IDLVSKLRQI LPEIGQRRRS DKASASKVLQ ETCNYIRNLN REVDNLSERL SQLLESVDED SPEAAVIRSL LM
Arabidopsis Description
PRE1Transcription factor PRE1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLE9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.