Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0171700-01 | Rice | nucleus | 84.09 | 81.32 |
| Os06t0226500-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 75.0 | 75.86 |
| Os02t0747900-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 75.0 | 75.0 |
| GSMUA_Achr11P... | Banana | cytosol | 52.27 | 61.33 |
| Os03t0171300-01 | Rice | nucleus | 60.23 | 57.61 |
| Os10t0404300-00 | Rice | plastid | 56.82 | 54.95 |
| VIT_17s0000g05950.t01 | Wine grape | nucleus | 55.68 | 54.44 |
| Os04t0641700-00 | Rice | mitochondrion | 57.95 | 49.04 |
| KRH46796 | Soybean | nucleus | 43.18 | 41.76 |
| KRH54533 | Soybean | nucleus | 40.91 | 39.56 |
| Os11t0603000-01 | Rice | mitochondrion | 44.32 | 38.61 |
| KRH63371 | Soybean | nucleus | 38.64 | 36.96 |
Protein Annotations
| EnsemblPlants:Os10t0403800-00 | EnsemblPlantsGene:Os10g0403800 | EntrezGene:107278079 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR036638 | ncoils:Coil | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF179 | ProteinID:AAM74282.1 | ProteinID:AAP53674.1 | ProteinID:BAT10756.1 | ProteinID:EAZ16009.1 | RefSeq:XP_015613962.1 |
| SUPFAM:SSF47459 | UniParc:UPI00000A18D7 | UniProt:Q8LNC7 | MapMan:15.5.32 | : | : |
Description
BRASSINOSTEROID UPREGULATED 1-LIKE3, BRASSINOSTEROID UPREGULATED 1-LIKE 3Similar to DNA binding protein. (Os10t0403800-00)
Coordinates
chr10:-:13721970..13722965
Molecular Weight (calculated)
9920.9 Da
IEP (calculated)
9.333
GRAVY (calculated)
-0.614
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MSGRRASGRI TDDEINELIS KLQSLLPESS RRRGATSRSP ATKLLKEMCS YIKSLHREVD DLSERLSELM ATMDSNSPQA DIIRSLLR
1: MSSRRSSRSR QSGSSRISDD QISDLVSKLQ HLIPELRRRR SDKVSASKVL QETCNYIRNL HREVDDLSDR LSELLASTDD NSAEAAIIRS LLNY
Arabidopsis Description
PRE6Transcription factor PRE6 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW32]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.