CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH54533	Soybean	nucleus	61.54	61.54
KRH63371	Soybean	nucleus	59.34	58.7
VIT_17s0000g05950.t01	Wine grape	nucleus	50.55	51.11
KRH63380	Soybean	nucleus	49.45	48.91
GSMUA_Achr5P23360_001	Banana	nucleus	45.05	48.24
GSMUA_Achr1P21650_001	Banana	nucleus	42.86	45.88
TraesCS4B01G288000.1	Wheat	nucleus	42.86	45.88
GSMUA_Achr3P19950_001	Banana	cytosol, mitochondrion, nucleus, plastid	42.86	45.88
GSMUA_Achr2P07400_001	Banana	nucleus	42.86	45.35
GSMUA_Achr6P02760_001	Banana	plastid	41.76	44.71
TraesCS4A01G016000.1	Wheat	nucleus	41.76	44.71
GSMUA_Achr7P17970_001	Banana	nucleus	41.76	44.71
GSMUA_Achr5P17560_001	Banana	nucleus	41.76	44.71
GSMUA_Achr2P14930_001	Banana	nucleus	41.76	44.19
GSMUA_Achr8P17980_001	Banana	nucleus	41.76	43.68
GSMUA_Achr6P30660_001	Banana	nucleus	40.66	43.53
TraesCS7B01G090500.1	Wheat	nucleus	41.76	43.18
TraesCS7A01G185300.1	Wheat	nucleus	41.76	43.18
TraesCS7D01G187000.1	Wheat	nucleus	41.76	43.18
Os10t0403800-00	Rice	nucleus	41.76	43.18
HORVU7Hr1G038060.1	Barley	cytosol, plastid	40.66	43.02
Zm00001d027859_P001	Maize	nucleus	40.66	43.02
EER95420	Sorghum	nucleus	40.66	43.02
GSMUA_Achr10P...	Banana	nucleus	41.76	42.7
Os06t0226500-01	Rice	cytosol, mitochondrion, nucleus, plastid	40.66	42.53
Zm00001d044839_P001	Maize	cytosol	40.66	42.53
KRH40108	Soybean	cytosol, mitochondrion, nucleus, plastid	42.86	42.39
KRH01162	Soybean	cytosol, mitochondrion, nucleus, plastid	42.86	42.39
GSMUA_Achr4P24120_001	Banana	nucleus	39.56	42.35
TraesCS4D01G286800.1	Wheat	nucleus	39.56	42.35
GSMUA_Achr9P09010_001	Banana	nucleus	39.56	42.35
Zm00001d052254_P001	Maize	cytosol	41.76	42.22
Os02t0747900-01	Rice	cytosol, mitochondrion, nucleus, plastid	40.66	42.05
TraesCS6A01G306200.1	Wheat	nucleus	40.66	42.05
KRH69304	Soybean	mitochondrion	42.86	41.94
EER88111	Sorghum	nucleus	39.56	41.86
Os03t0171700-01	Rice	nucleus	41.76	41.76
Zm00001d018056_P001	Maize	cytosol	40.66	41.57
Zm00001d048309_P001	Maize	nucleus	39.56	41.38
GSMUA_Achr6P35370_001	Banana	nucleus	38.46	41.18
EES05528	Sorghum	cytosol, mitochondrion, nucleus, plastid	40.66	41.11
KRH74825	Soybean	mitochondrion	41.76	40.86
KRH45881	Soybean	mitochondrion	40.66	39.78
TraesCS6D01G285300.1	Wheat	nucleus	38.46	39.77
TraesCS6B01G334600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	38.46	39.77
GSMUA_Achr7P11580_001	Banana	nucleus	39.56	39.56
KRH18488	Soybean	mitochondrion	39.56	39.56
KRG93518	Soybean	mitochondrion	39.56	39.56
KRG99125	Soybean	cytosol, mitochondrion, nucleus	39.56	38.71
GSMUA_Achr10P...	Banana	nucleus	34.07	36.47
GSMUA_Achr11P...	Banana	cytosol	26.37	32.0
KRH54526	Soybean	endoplasmic reticulum, vacuole	49.45	30.82
HORVU4Hr1G075340.2	Barley	plastid	30.77	21.71

Protein Annotations

EMBL:ACUP02005360	EnsemblPlants:KRH46796	EnsemblPlantsGene:GLYMA_08G356900	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
ncoils:Coil	PANTHER:PTHR38546	PFAM:PF00010	PFscan:PS50888	ProteinID:KRH46796	ProteinID:KRH46796.1
SUPFAM:SSF47459	UniParc:UPI0002337C75	UniProt:K7LAU2	MapMan:15.5.32	:	:

Description

hypothetical protein

Coordinates

chr8:-:46939609..46941729

Molecular Weight (calculated)

10620.5 Da

IEP (calculated)

7.262

GRAVY (calculated)

-0.812

Length

91 amino acids

Sequence
(BLAST)

1: MSGQRRSSRA SKFTENEINE LVSRLQVLLP QVNQRGNSRQ SASKILQETC CHIRRLQEEV EQLSERLSEI LDSADISDID RRTLQNFLQQ Y

Best Arabidopsis Sequence Match ( AT3G28857.1 )
(BLAST)

1: MSNRRSRQTS NASRISDDQM IDLVSKLRQF LPEIHERRRS DKVSASKVLQ ETCNYIRKLH REVDNLSDRL SQLLDSVDED SPEAAVIRSL LM

Arabidopsis Description

PRE5Transcription factor PRE5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.