CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99125	Soybean	cytosol, mitochondrion, nucleus	94.62	94.62
KRH69304	Soybean	mitochondrion	92.47	92.47
KRH74825	Soybean	mitochondrion	91.4	91.4
KRH63380	Soybean	nucleus	80.65	81.52
KRG93518	Soybean	mitochondrion	73.12	74.73
KRH18488	Soybean	mitochondrion	73.12	74.73
Bra023508.1-P	Field mustard	mitochondrion	73.12	73.12
CDX85562	Canola	mitochondrion	73.12	73.12
KRH40108	Soybean	cytosol, mitochondrion, nucleus, plastid	72.04	72.83
CDX91006	Canola	mitochondrion	72.04	72.04
CDY68961	Canola	mitochondrion	72.04	72.04
KRH01162	Soybean	cytosol, mitochondrion, nucleus, plastid	70.97	71.74
CDX69545	Canola	mitochondrion, plastid	72.04	71.28
Bra008716.1-P	Field mustard	mitochondrion, plastid	72.04	71.28
CDX85055	Canola	mitochondrion, plastid	70.97	70.21
CDX78615	Canola	mitochondrion	69.89	69.15
Bra006286.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	69.89	69.15
AT5G15160.1	Thale cress	mitochondrion	68.82	68.09
KRH54526	Soybean	endoplasmic reticulum, vacuole	76.34	48.63
KRH46796	Soybean	nucleus	39.78	40.66
KRH54533	Soybean	nucleus	35.48	36.26
KRH63371	Soybean	nucleus	35.48	35.87

Protein Annotations

EntrezGene:100791371	MapMan:15.5.32	Gene3D:4.10.280.10	UniProt:A0A0R0IZW0	EMBL:ACUP02005292	ncoils:Coil
EnsemblPlantsGene:GLYMA_08G298700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	EnsemblPlants:KRH45881	ProteinID:KRH45881	ProteinID:KRH45881.1	PFAM:PF00010
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF172	SUPFAM:SSF47459	UniParc:UPI00018C699D	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:41608700..41610451

Molecular Weight (calculated)

10404.4 Da

IEP (calculated)

10.025

GRAVY (calculated)

-0.444

Length

93 amino acids

Sequence
(BLAST)

1: MSSRRSRSRQ SGVSTEITDA QITDLISKLQ QLIPELRARR SDKVSASKVL QETCNYIKSL HREVDDLSDR LSQLLATTDS NSAQAAIIRS LLM

Best Arabidopsis Sequence Match ( AT3G47710.1 )
(BLAST)

1: MSSRKSRSRQ TGASMITDEQ INDLVLQLHR LLPELANNRR SGKVSASRVL QETCSYIRNL SKEVDDLSER LSQLLESTDS AQAALIRSLL MQ

Arabidopsis Description

PRE4Transcription factor PRE4 [Source:UniProtKB/Swiss-Prot;Acc:F4JCN9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.