Factsheet for AT5G15160.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008716.1-P	Field mustard	mitochondrion, plastid	94.68	94.68
CDX69545	Canola	mitochondrion, plastid	94.68	94.68
CDX78615	Canola	mitochondrion	94.68	94.68
CDX91006	Canola	mitochondrion	93.62	94.62
Bra006286.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	93.62	93.62
CDX85055	Canola	mitochondrion, plastid	93.62	93.62
Bra023508.1-P	Field mustard	mitochondrion	92.55	93.55
CDX85562	Canola	mitochondrion	92.55	93.55
CDY68961	Canola	mitochondrion	91.49	92.47
AT5G39860.1	Thale cress	mitochondrion	70.21	71.74
AT1G26945.1	Thale cress	nucleus	71.28	71.28
AT3G28857.1	Thale cress	mitochondrion	69.15	70.65
KRH45881	Soybean	mitochondrion	68.09	68.82
KRH69304	Soybean	mitochondrion	65.96	66.67
KRG99125	Soybean	cytosol, mitochondrion, nucleus	65.96	66.67
KRH74825	Soybean	mitochondrion	64.89	65.59
AT3G47710.1	Thale cress	nucleus	61.7	63.04
AT1G74500.1	Thale cress	nucleus	61.7	62.37

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	EntrezGene:831368	ProteinID:AED92123.1	EMBL:AK118887	ArrayExpress:AT5G15160
EnsemblPlantsGene:AT5G15160	RefSeq:AT5G15160	TAIR:AT5G15160	RefSeq:AT5G15160-TAIR-G	EnsemblPlants:AT5G15160.1	TAIR:AT5G15160.1
Symbol:BNQ2	EMBL:BT005460	ProteinID:CAB89326.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0005773	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154
GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628
GO:GO:0009640	GO:GO:0009719	GO:GO:0009740	GO:GO:0009791	GO:GO:0009987	GO:GO:0040007
GO:GO:0040008	GO:GO:0046983	GO:GO:0048510	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
RefSeq:NP_197020.1	PFAM:PF00010	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0004703	PO:PO:0004705	PO:PO:0007064	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PFscan:PS50888	PANTHER:PTHR12565	PANTHER:PTHR12565:SF299	UniProt:Q9LXG5	SUPFAM:SSF47459	UniParc:UPI000000C66B
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

PRE2Transcription factor PRE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG5]

Coordinates

chr5:-:4921243..4922812

Molecular Weight (calculated)

10546.3 Da

IEP (calculated)

10.107

GRAVY (calculated)

-0.763

Length

94 amino acids

Sequence
(BLAST)

1: MSSSRRSRQA SSSSRISDDQ ITDLISKLRQ SIPEIRQNRR SNTVSASKVL QETCNYIRNL NKEADDLSDR LTQLLESIDP NSPQAAVIRS LING

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.