Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • plastid 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:mitochondrion
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78615 Canola mitochondrion 98.94 98.94
Bra008716.1-P Field mustard mitochondrion, plastid 94.68 94.68
Bra023508.1-P Field mustard mitochondrion 93.62 94.62
AT5G15160.1 Thale cress mitochondrion 93.62 93.62
Bra028443.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 69.15 70.65
KRH45881 Soybean mitochondrion 69.15 69.89
KRG99125 Soybean cytosol, mitochondrion, nucleus 67.02 67.74
Bra024672.1-P Field mustard nucleus 68.09 67.37
Bra016299.1-P Field mustard nucleus 67.02 67.02
KRH69304 Soybean mitochondrion 65.96 66.67
Bra025358.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 64.89 66.3
Bra033063.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 64.89 66.3
Bra012435.1-P Field mustard nucleus 65.96 65.96
KRH74825 Soybean mitochondrion 64.89 65.59
Bra018117.1-P Field mustard nucleus 63.83 64.52
Bra015906.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 60.64 63.33
Bra003797.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 59.57 60.22
Bra008154.1-P Field mustard nucleus 56.38 56.99
Protein Annotations
EnsemblPlants:Bra006286.1EnsemblPlants:Bra006286.1-PEnsemblPlantsGene:Bra006286Gene3D:4.10.280.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0046983InterPro:HLH_DNA-bd_sfInterPro:IPR011598InterPro:IPR036638InterPro:bHLH_dom
ncoils:CoilPANTHER:PTHR12565PANTHER:PTHR12565:SF299PFAM:PF00010PFscan:PS50888SEG:seg
SUPFAM:SSF47459UniParc:UPI000253FC0BUniProt:M4CPZ7MapMan:15.5.32::
Description
AT5G15160 (E=3e-036) | bHLH family protein
Coordinates
chrA03:-:2874044..2875101
Molecular Weight (calculated)
10629.4 Da
IEP (calculated)
9.362
GRAVY (calculated)
-0.820
Length
94 amino acids
Sequence
(BLAST)
1: MSSGRRSRQA SSSSRINDDQ ITELISKLRQ SIPEIRQNRR SNTVSASKVL QETCNYIRNL NKEADDLSDR LSQLLETIDP NSPQAAVIRS LINE
Best Arabidopsis Sequence Match ( AT5G15160.1 )
(BLAST)
1: MSSSRRSRQA SSSSRISDDQ ITDLISKLRQ SIPEIRQNRR SNTVSASKVL QETCNYIRNL NKEADDLSDR LTQLLESIDP NSPQAAVIRS LING
Arabidopsis Description
PRE2Transcription factor PRE2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.