Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40108 | Soybean | cytosol, mitochondrion, nucleus, plastid | 98.91 | 98.91 |
| KRH18488 | Soybean | mitochondrion | 88.04 | 89.01 |
| KRG93518 | Soybean | mitochondrion | 88.04 | 89.01 |
| VIT_14s0108g00420.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 83.7 | 85.56 |
| Solyc02g087860.2.1 | Tomato | nucleus | 82.61 | 82.61 |
| PGSC0003DMT400003587 | Potato | nucleus | 82.61 | 82.61 |
| PGSC0003DMT400017748 | Potato | nucleus | 79.35 | 78.49 |
| Solyc02g067380.2.1 | Tomato | nucleus | 79.35 | 77.66 |
| KRH63380 | Soybean | nucleus | 76.09 | 76.09 |
| Bra033063.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 75.0 | 75.0 |
| CDY20013 | Canola | cytosol, mitochondrion, nucleus, plastid | 75.0 | 75.0 |
| CDY70014 | Canola | cytosol, mitochondrion, nucleus, plastid | 75.0 | 75.0 |
| CDX86409 | Canola | cytosol, mitochondrion, nucleus, plastid | 73.91 | 73.91 |
| CDY00110 | Canola | cytosol, mitochondrion, nucleus, plastid | 73.91 | 73.91 |
| CDY04040 | Canola | cytosol, mitochondrion, nucleus, plastid | 73.91 | 73.91 |
| AT3G28857.1 | Thale cress | mitochondrion | 73.91 | 73.91 |
| Bra025358.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 73.91 | 73.91 |
| PGSC0003DMT400008752 | Potato | plastid | 75.0 | 71.88 |
| CDX67440 | Canola | mitochondrion | 71.74 | 71.74 |
| AT5G39860.1 | Thale cress | mitochondrion | 71.74 | 71.74 |
| CDY65320 | Canola | mitochondrion | 71.74 | 71.74 |
| KRH45881 | Soybean | mitochondrion | 71.74 | 70.97 |
| CDY63469 | Canola | nucleus | 71.74 | 70.97 |
| Bra028443.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 70.65 | 70.65 |
| KRH69304 | Soybean | mitochondrion | 69.57 | 68.82 |
| KRH74825 | Soybean | mitochondrion | 68.48 | 67.74 |
| KRG99125 | Soybean | cytosol, mitochondrion, nucleus | 68.48 | 67.74 |
| KRH54526 | Soybean | endoplasmic reticulum, vacuole | 73.91 | 46.58 |
| KRH46796 | Soybean | nucleus | 42.39 | 42.86 |
| KRH54533 | Soybean | nucleus | 32.61 | 32.97 |
| KRH63371 | Soybean | nucleus | 32.61 | 32.61 |
Protein Annotations
| EntrezGene:100784537 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02011502 | EMBL:BT094878 | UniProt:C6TBH0 |
| EnsemblPlantsGene:GLYMA_18G258700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH01162 | ProteinID:KRH01162 | ProteinID:KRH01162.1 | EMBL:KT031126 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF299 | SUPFAM:SSF47459 | UniParc:UPI0000E64AC6 |
| InterPro:bHLH_dom | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr18:-:54416983..54419330
Molecular Weight (calculated)
10434.4 Da
IEP (calculated)
10.105
GRAVY (calculated)
-0.588
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSRRSRQHS GSTRISDDQI IELVSKLRQL VPEIRNRRSD KVSASKVLQE TCNYIRGLHR EVSDLSERLS QLLTTIDADS AEAGIIRSLL NQ
1: MSNRRSRQTS NASRISDDQM IDLVSKLRQF LPEIHERRRS DKVSASKVLQ ETCNYIRKLH REVDNLSDRL SQLLDSVDED SPEAAVIRSL LM
Arabidopsis Description
PRE5Transcription factor PRE5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.