Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g05900.t01 | Wine grape | mitochondrion | 88.04 | 89.01 |
| KRH45881 | Soybean | mitochondrion | 81.52 | 80.65 |
| KRG93518 | Soybean | mitochondrion | 79.35 | 80.22 |
| KRH18488 | Soybean | mitochondrion | 79.35 | 80.22 |
| KRH69304 | Soybean | mitochondrion | 80.43 | 79.57 |
| KRH74825 | Soybean | mitochondrion | 79.35 | 78.49 |
| KRH40108 | Soybean | cytosol, mitochondrion, nucleus, plastid | 77.17 | 77.17 |
| KRG99125 | Soybean | cytosol, mitochondrion, nucleus | 77.17 | 76.34 |
| KRH01162 | Soybean | cytosol, mitochondrion, nucleus, plastid | 76.09 | 76.09 |
| KRH54526 | Soybean | endoplasmic reticulum, vacuole | 95.65 | 60.27 |
| KRH46796 | Soybean | nucleus | 48.91 | 49.45 |
| KRH54533 | Soybean | nucleus | 40.22 | 40.66 |
| KRH63371 | Soybean | nucleus | 38.04 | 38.04 |
Protein Annotations
| EntrezGene:100527636 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02002672 | EMBL:BT092494 | UniProt:C6T4Y3 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_04G172500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH63380 | ProteinID:KRH63380 | ProteinID:KRH63380.1 |
| EMBL:KT031104 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 | PANTHER:PTHR12565:SF172 | SUPFAM:SSF47459 |
| UniParc:UPI0000E649F9 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:+:43118807..43121127
Molecular Weight (calculated)
10574.5 Da
IEP (calculated)
9.363
GRAVY (calculated)
-0.723
Length
92 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSRRSRSRQ TSSSRNITDD QINDLVSKLQ QLLPEIRDRR SDKVSASKVL QETCNYIRSL HREVDDLSER LSELLATTDT AQAAIIRNLL MQ
1: MSGRRSRSRQ SSGTSRISED QINDLIIKLQ QLLPELRDSR RSDKVSAARV LQDTCNYIRN LHREVDDLSE RLSELLANSD TAQAALIRSL LTQ
Arabidopsis Description
PRE3Transcription factor PRE3 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA64]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.