Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES05528 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 91.11 | 91.11 |
| Zm00001d018056_P001 | Maize | cytosol | 88.89 | 89.89 |
| Os02t0747900-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 82.22 | 84.09 |
| TraesCS6A01G306200.1 | Wheat | nucleus | 81.11 | 82.95 |
| TraesCS6B01G334600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 81.11 | 82.95 |
| TraesCS6D01G285300.1 | Wheat | nucleus | 81.11 | 82.95 |
| Zm00001d044839_P001 | Maize | cytosol | 74.44 | 77.01 |
| GSMUA_Achr7P11580_001 | Banana | nucleus | 76.67 | 75.82 |
| GSMUA_Achr10P... | Banana | nucleus | 74.44 | 75.28 |
| GSMUA_Achr8P17980_001 | Banana | nucleus | 72.22 | 74.71 |
| GSMUA_Achr2P07400_001 | Banana | nucleus | 71.11 | 74.42 |
| GSMUA_Achr1P21650_001 | Banana | nucleus | 68.89 | 72.94 |
| Zm00001d027859_P001 | Maize | nucleus | 68.89 | 72.09 |
| GSMUA_Achr4P24120_001 | Banana | nucleus | 67.78 | 71.76 |
| GSMUA_Achr5P17560_001 | Banana | nucleus | 66.67 | 70.59 |
| Zm00001d048309_P001 | Maize | nucleus | 66.67 | 68.97 |
| GSMUA_Achr2P14930_001 | Banana | nucleus | 65.56 | 68.6 |
| VIT_17s0000g05950.t01 | Wine grape | nucleus | 52.22 | 52.22 |
| Zm00001d002121_P001 | Maize | mitochondrion, plastid | 54.44 | 47.12 |
| Zm00001d027855_P001 | Maize | nucleus | 47.78 | 46.74 |
| KRH46796 | Soybean | nucleus | 42.22 | 41.76 |
| KRH54533 | Soybean | nucleus | 40.0 | 39.56 |
| KRH63371 | Soybean | nucleus | 38.89 | 38.04 |
Protein Annotations
| EntrezGene:100286033 | MapMan:15.5.32 | Gene3D:4.10.280.10 | ProteinID:AQK56563.1 | UniProt:B6UDF7 | EMBL:BT061818 |
| ncoils:Coil | EMBL:EU975272 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR12565 |
| PANTHER:PTHR12565:SF84 | SUPFAM:SSF47459 | UniParc:UPI0001609AFB | EnsemblPlantsGene:Zm00001d052254 | EnsemblPlants:Zm00001d052254_P001 | EnsemblPlants:Zm00001d052254_T001 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
bHLH-transcription factor 155Transcription factor PRE3
Coordinates
chr4:+:184820400..184821661
Molecular Weight (calculated)
10019.8 Da
IEP (calculated)
9.335
GRAVY (calculated)
-0.659
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MSSRRSSSHG NISEDEMNEL VSKLQALLPS SRRRRGSGQA STAKLLKETC SYIKSLQREV DDLSDRLSDL LSTMDHNSPA AEIIRSILRS
1: MSNRRSRQTS NASRISDDQM IDLVSKLRQF LPEIHERRRS DKVSASKVLQ ETCNYIRKLH REVDNLSDRL SQLLDSVDED SPEAAVIRSL LM
Arabidopsis Description
PRE5Transcription factor PRE5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX1]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.